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Search of human proteins with 239741723
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239741723 PREDICTED: hypothetical protein XP_002342306 [Homo
sapiens]
(488 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239741723 PREDICTED: hypothetical protein XP_002342306 [Homo ... 997 0.0
gi|239747780 PREDICTED: hypothetical protein XP_002348293 [Homo ... 915 0.0
gi|169163721 PREDICTED: similar to EID2 protein [Homo sapiens] 213 3e-55
gi|63175652 CREBBP/EP300 inhibitor 2 [Homo sapiens] 127 3e-29
gi|24308368 EP300 interacting inhibitor of differentiation 2B [H... 51 3e-06
gi|7656938 CREBBP/EP300 inhibitor 1 [Homo sapiens] 33 0.59
gi|18034775 PHD finger protein 20 [Homo sapiens] 31 2.9
gi|239750109 PREDICTED: similar to unc-93 homolog B1 (C. elegans... 29 8.5
gi|239744415 PREDICTED: similar to unc-93 homolog B1 (C. elegans... 29 8.5
>gi|239741723 PREDICTED: hypothetical protein XP_002342306 [Homo
sapiens]
Length = 488
Score = 997 bits (2578), Expect = 0.0
Identities = 488/488 (100%), Positives = 488/488 (100%)
Query: 1 MQELRFKSTEEPVELANHMEVPKPPALHAPTRHTLCPSLIDGKIDLGRIKQINPTDELSA 60
MQELRFKSTEEPVELANHMEVPKPPALHAPTRHTLCPSLIDGKIDLGRIKQINPTDELSA
Sbjct: 1 MQELRFKSTEEPVELANHMEVPKPPALHAPTRHTLCPSLIDGKIDLGRIKQINPTDELSA 60
Query: 61 GIWACPQYWGHSKIQSKVCLQRLHSPTFATGASWRAVGCSEVLTTSLRNDFSNNHPECLT 120
GIWACPQYWGHSKIQSKVCLQRLHSPTFATGASWRAVGCSEVLTTSLRNDFSNNHPECLT
Sbjct: 61 GIWACPQYWGHSKIQSKVCLQRLHSPTFATGASWRAVGCSEVLTTSLRNDFSNNHPECLT 120
Query: 121 HRLLWFFPASRSGTARQQIFGALGHTGQSTKSNTTQVRAAGSPGYTYKSKAKIQAHTLIP 180
HRLLWFFPASRSGTARQQIFGALGHTGQSTKSNTTQVRAAGSPGYTYKSKAKIQAHTLIP
Sbjct: 121 HRLLWFFPASRSGTARQQIFGALGHTGQSTKSNTTQVRAAGSPGYTYKSKAKIQAHTLIP 180
Query: 181 RWKFISKAVQEGARGWRTQVLWSHLEGTGTGLQAKAAFYRLNHAQAAVGYELPVPKCVQA 240
RWKFISKAVQEGARGWRTQVLWSHLEGTGTGLQAKAAFYRLNHAQAAVGYELPVPKCVQA
Sbjct: 181 RWKFISKAVQEGARGWRTQVLWSHLEGTGTGLQAKAAFYRLNHAQAAVGYELPVPKCVQA 240
Query: 241 MLPRQQLGIQEFREDAKDRNMKGLLGHQGQKQFQTNAYSPADSPVHRCPAASRKLHIQNV 300
MLPRQQLGIQEFREDAKDRNMKGLLGHQGQKQFQTNAYSPADSPVHRCPAASRKLHIQNV
Sbjct: 241 MLPRQQLGIQEFREDAKDRNMKGLLGHQGQKQFQTNAYSPADSPVHRCPAASRKLHIQNV 300
Query: 301 SLEGSGVVKWVRPVERSKAHTRLPQNQNTAEEILGTKTTREAQLTLWSNTGQAGLAVLPN 360
SLEGSGVVKWVRPVERSKAHTRLPQNQNTAEEILGTKTTREAQLTLWSNTGQAGLAVLPN
Sbjct: 301 SLEGSGVVKWVRPVERSKAHTRLPQNQNTAEEILGTKTTREAQLTLWSNTGQAGLAVLPN 360
Query: 361 LCLQHPLVIVLGINYPIAPSRMQELAEGRRRLAEACRAREAAFDAEQQRNPRRMDSDILT 420
LCLQHPLVIVLGINYPIAPSRMQELAEGRRRLAEACRAREAAFDAEQQRNPRRMDSDILT
Sbjct: 361 LCLQHPLVIVLGINYPIAPSRMQELAEGRRRLAEACRAREAAFDAEQQRNPRRMDSDILT 420
Query: 421 LTTALTASEATSPLTEELGYDEFINRECEYGLSTFRVPDRMASGEYAITYPAGLFLNYKG 480
LTTALTASEATSPLTEELGYDEFINRECEYGLSTFRVPDRMASGEYAITYPAGLFLNYKG
Sbjct: 421 LTTALTASEATSPLTEELGYDEFINRECEYGLSTFRVPDRMASGEYAITYPAGLFLNYKG 480
Query: 481 AQCAINRQ 488
AQCAINRQ
Sbjct: 481 AQCAINRQ 488
>gi|239747780 PREDICTED: hypothetical protein XP_002348293 [Homo
sapiens]
Length = 546
Score = 915 bits (2366), Expect = 0.0
Identities = 448/448 (100%), Positives = 448/448 (100%)
Query: 1 MQELRFKSTEEPVELANHMEVPKPPALHAPTRHTLCPSLIDGKIDLGRIKQINPTDELSA 60
MQELRFKSTEEPVELANHMEVPKPPALHAPTRHTLCPSLIDGKIDLGRIKQINPTDELSA
Sbjct: 1 MQELRFKSTEEPVELANHMEVPKPPALHAPTRHTLCPSLIDGKIDLGRIKQINPTDELSA 60
Query: 61 GIWACPQYWGHSKIQSKVCLQRLHSPTFATGASWRAVGCSEVLTTSLRNDFSNNHPECLT 120
GIWACPQYWGHSKIQSKVCLQRLHSPTFATGASWRAVGCSEVLTTSLRNDFSNNHPECLT
Sbjct: 61 GIWACPQYWGHSKIQSKVCLQRLHSPTFATGASWRAVGCSEVLTTSLRNDFSNNHPECLT 120
Query: 121 HRLLWFFPASRSGTARQQIFGALGHTGQSTKSNTTQVRAAGSPGYTYKSKAKIQAHTLIP 180
HRLLWFFPASRSGTARQQIFGALGHTGQSTKSNTTQVRAAGSPGYTYKSKAKIQAHTLIP
Sbjct: 121 HRLLWFFPASRSGTARQQIFGALGHTGQSTKSNTTQVRAAGSPGYTYKSKAKIQAHTLIP 180
Query: 181 RWKFISKAVQEGARGWRTQVLWSHLEGTGTGLQAKAAFYRLNHAQAAVGYELPVPKCVQA 240
RWKFISKAVQEGARGWRTQVLWSHLEGTGTGLQAKAAFYRLNHAQAAVGYELPVPKCVQA
Sbjct: 181 RWKFISKAVQEGARGWRTQVLWSHLEGTGTGLQAKAAFYRLNHAQAAVGYELPVPKCVQA 240
Query: 241 MLPRQQLGIQEFREDAKDRNMKGLLGHQGQKQFQTNAYSPADSPVHRCPAASRKLHIQNV 300
MLPRQQLGIQEFREDAKDRNMKGLLGHQGQKQFQTNAYSPADSPVHRCPAASRKLHIQNV
Sbjct: 241 MLPRQQLGIQEFREDAKDRNMKGLLGHQGQKQFQTNAYSPADSPVHRCPAASRKLHIQNV 300
Query: 301 SLEGSGVVKWVRPVERSKAHTRLPQNQNTAEEILGTKTTREAQLTLWSNTGQAGLAVLPN 360
SLEGSGVVKWVRPVERSKAHTRLPQNQNTAEEILGTKTTREAQLTLWSNTGQAGLAVLPN
Sbjct: 301 SLEGSGVVKWVRPVERSKAHTRLPQNQNTAEEILGTKTTREAQLTLWSNTGQAGLAVLPN 360
Query: 361 LCLQHPLVIVLGINYPIAPSRMQELAEGRRRLAEACRAREAAFDAEQQRNPRRMDSDILT 420
LCLQHPLVIVLGINYPIAPSRMQELAEGRRRLAEACRAREAAFDAEQQRNPRRMDSDILT
Sbjct: 361 LCLQHPLVIVLGINYPIAPSRMQELAEGRRRLAEACRAREAAFDAEQQRNPRRMDSDILT 420
Query: 421 LTTALTASEATSPLTEELGYDEFINREC 448
LTTALTASEATSPLTEELGYDEFINREC
Sbjct: 421 LTTALTASEATSPLTEELGYDEFINREC 448
>gi|169163721 PREDICTED: similar to EID2 protein [Homo sapiens]
Length = 156
Score = 213 bits (542), Expect = 3e-55
Identities = 107/107 (100%), Positives = 107/107 (100%)
Query: 341 EAQLTLWSNTGQAGLAVLPNLCLQHPLVIVLGINYPIAPSRMQELAEGRRRLAEACRARE 400
EAQLTLWSNTGQAGLAVLPNLCLQHPLVIVLGINYPIAPSRMQELAEGRRRLAEACRARE
Sbjct: 27 EAQLTLWSNTGQAGLAVLPNLCLQHPLVIVLGINYPIAPSRMQELAEGRRRLAEACRARE 86
Query: 401 AAFDAEQQRNPRRMDSDILTLTTALTASEATSPLTEELGYDEFINRE 447
AAFDAEQQRNPRRMDSDILTLTTALTASEATSPLTEELGYDEFINRE
Sbjct: 87 AAFDAEQQRNPRRMDSDILTLTTALTASEATSPLTEELGYDEFINRE 133
>gi|63175652 CREBBP/EP300 inhibitor 2 [Homo sapiens]
Length = 236
Score = 127 bits (318), Expect = 3e-29
Identities = 72/111 (64%), Positives = 77/111 (69%), Gaps = 12/111 (10%)
Query: 348 SNTGQAGLAVLPNLCLQHPLVIVLGINY-----------PIAPSRMQELAEGRRRLAEAC 396
S G GLA LP L L+HPL VLGINY PIAP R+QEL E RRR EAC
Sbjct: 127 SRHGNGGLAALPYLRLRHPLS-VLGINYQQFLRHYLENYPIAPGRIQELEERRRRFVEAC 185
Query: 397 RAREAAFDAEQQRNPRRMDSDILTLTTALTASEATSPLTEELGYDEFINRE 447
RAREAAFDAE QRNP R+D DILT T ALTASE +PL EELG D+FINRE
Sbjct: 186 RAREAAFDAEYQRNPHRVDLDILTFTIALTASEVINPLIEELGCDKFINRE 236
>gi|24308368 EP300 interacting inhibitor of differentiation 2B [Homo
sapiens]
Length = 161
Score = 50.8 bits (120), Expect = 3e-06
Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
Query: 382 MQELAEGRRRLAEACRAREAAFDAEQQRNPRRMDSDILTLTTALTASEATSPLTE 436
+++ E RR E C+AREAAFDA+ P +MD + T ALTASEA SPL +
Sbjct: 111 LRDFEERRRLFVEGCKAREAAFDAD----PPQMDFAAVAFTVALTASEALSPLAD 161
>gi|7656938 CREBBP/EP300 inhibitor 1 [Homo sapiens]
Length = 187
Score = 33.1 bits (74), Expect = 0.59
Identities = 20/51 (39%), Positives = 25/51 (49%)
Query: 397 RAREAAFDAEQQRNPRRMDSDILTLTTALTASEATSPLTEELGYDEFINRE 447
R RE A D Q + + D L L + + LTEELG DE I+RE
Sbjct: 137 RTREPALDGGFQMHYEKTPFDQLAFIEELFSLMVVNRLTEELGCDEIIDRE 187
>gi|18034775 PHD finger protein 20 [Homo sapiens]
Length = 1012
Score = 30.8 bits (68), Expect = 2.9
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 258 DRNMKGLLGHQGQKQFQ--TNAYSPADSPVHRCPAASRKLHIQNVSLEGSGVVKWVRPVE 315
DR +GLL Q Q QF T+ S D HR + ++L + L+ +G ++ P+
Sbjct: 925 DRGGEGLLSSQHQWQFNLLTHVESLQDEVTHRMDSIEKELDVLESWLDYTGELEPPEPL- 983
Query: 316 RSKAHTRLPQNQNTAEEIL 334
RLPQ ++ +++L
Sbjct: 984 -----ARLPQLKHCIKQLL 997
>gi|239750109 PREDICTED: similar to unc-93 homolog B1 (C. elegans)
[Homo sapiens]
Length = 529
Score = 29.3 bits (64), Expect = 8.5
Identities = 47/202 (23%), Positives = 83/202 (41%), Gaps = 24/202 (11%)
Query: 196 WRTQVLWSHLEGTGTGLQAKAAFYRLNHAQAAVGY---ELPVPKCV---QAMLPRQQLGI 249
W+ +++ G+ ++AK A + AAV Y E + + V Q +PR Q +
Sbjct: 98 WQAVAIFTVYLGSSLHMKAKLAMLLVTLVAAAVSYLRMEQKLRRGVAPPQPRIPRPQHKV 157
Query: 250 QEFR---EDAKDRNMKGLLGHQGQKQFQTNAYSPADSPV----HRCP--AASRKLHIQNV 300
+ +R +++++ + + G +++ P P CP A R +
Sbjct: 158 RGYRYLEDNSEESDAEDEHGDGAEEEAPPAGPRPGPEPAGLGRRPCPYEQAQRGDGPEEH 217
Query: 301 SLEGSGVVKWVRPVERSKAHTRLPQNQNTAEEILGTKTTREAQLTLWSNTGQAGLAVLPN 360
L+G GV W P+ +++ +NTAE + T A S+ A L +LP
Sbjct: 218 PLQG-GVEPW-EPLGQAQGF------ENTAETLRALSTRPSAGAGSGSSCDPAPLQILPA 269
Query: 361 LCL-QHPLVIVLGINYPIAPSR 381
+ P V L +YP P R
Sbjct: 270 VGRGPGPRVTALCTSYPQGPPR 291
>gi|239744415 PREDICTED: similar to unc-93 homolog B1 (C. elegans)
[Homo sapiens]
Length = 503
Score = 29.3 bits (64), Expect = 8.5
Identities = 47/202 (23%), Positives = 83/202 (41%), Gaps = 24/202 (11%)
Query: 196 WRTQVLWSHLEGTGTGLQAKAAFYRLNHAQAAVGY---ELPVPKCV---QAMLPRQQLGI 249
W+ +++ G+ ++AK A + AAV Y E + + V Q +PR Q +
Sbjct: 72 WQAVAIFTVYLGSSLHMKAKLAMLLVTLVAAAVSYLRMEQKLRRGVAPPQPRIPRPQHKV 131
Query: 250 QEFR---EDAKDRNMKGLLGHQGQKQFQTNAYSPADSPV----HRCP--AASRKLHIQNV 300
+ +R +++++ + + G +++ P P CP A R +
Sbjct: 132 RGYRYLEDNSEESDAEDEHGDGAEEEAPPAGPRPGPEPAGLGRRPCPYEQAQRGDGPEEH 191
Query: 301 SLEGSGVVKWVRPVERSKAHTRLPQNQNTAEEILGTKTTREAQLTLWSNTGQAGLAVLPN 360
L+G GV W P+ +++ +NTAE + T A S+ A L +LP
Sbjct: 192 PLQG-GVEPW-EPLGQAQGF------ENTAETLRALSTRPSAGAGSGSSCDPAPLQILPA 243
Query: 361 LCL-QHPLVIVLGINYPIAPSR 381
+ P V L +YP P R
Sbjct: 244 VGRGPGPRVTALCTSYPQGPPR 265
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.131 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,097,897
Number of Sequences: 37866
Number of extensions: 846330
Number of successful extensions: 2025
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 2017
Number of HSP's gapped (non-prelim): 9
length of query: 488
length of database: 18,247,518
effective HSP length: 106
effective length of query: 382
effective length of database: 14,233,722
effective search space: 5437281804
effective search space used: 5437281804
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.