Search of human proteins with 23503279

Search of human proteins with 23503279

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|23503279 transmembrane protein 161B [Homo sapiens]
         (487 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|23503279 transmembrane protein 161B [Homo sapiens]                 970   0.0  
gi|8923394 transmembrane protein 161A [Homo sapiens]                  466   e-131
gi|23943900 transmembrane channel-like 8 [Homo sapiens]                33   0.58 
gi|38708299 solute carrier family 29 (nucleoside transporters), ...    32   1.7  
gi|57165415 dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glu...    32   1.7  
gi|56121818 dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glu...    32   1.7  
gi|51873049 hypothetical protein LOC8603 [Homo sapiens]                31   2.9  
gi|94681046 cyclin M4 [Homo sapiens]                                   30   3.8  
gi|33695104 G protein-coupled receptor 65 [Homo sapiens]               30   6.5  

>gi|23503279 transmembrane protein 161B [Homo sapiens]
          Length = 487

 Score =  970 bits (2508), Expect = 0.0
 Identities = 487/487 (100%), Positives = 487/487 (100%)

Query: 1   MGVIGIQLVVTMVMASVMQKIIPHYSLARWLLCNGSLRWYQHPTEEELRILAGKQQKGKT 60
           MGVIGIQLVVTMVMASVMQKIIPHYSLARWLLCNGSLRWYQHPTEEELRILAGKQQKGKT
Sbjct: 1   MGVIGIQLVVTMVMASVMQKIIPHYSLARWLLCNGSLRWYQHPTEEELRILAGKQQKGKT 60

Query: 61  KKDRKYNGHIESKPLTIPKDIDLHLETKSVTEVDTLALHYFPEYQWLVDFTVAATVVYLV 120
           KKDRKYNGHIESKPLTIPKDIDLHLETKSVTEVDTLALHYFPEYQWLVDFTVAATVVYLV
Sbjct: 61  KKDRKYNGHIESKPLTIPKDIDLHLETKSVTEVDTLALHYFPEYQWLVDFTVAATVVYLV 120

Query: 121 TEVYYNFMKPTQEMNISLVWCLLVLSFAIKVLFSLTTHYFKVEDGGERSVCVTFGFFFFV 180
           TEVYYNFMKPTQEMNISLVWCLLVLSFAIKVLFSLTTHYFKVEDGGERSVCVTFGFFFFV
Sbjct: 121 TEVYYNFMKPTQEMNISLVWCLLVLSFAIKVLFSLTTHYFKVEDGGERSVCVTFGFFFFV 180

Query: 181 KAMAVLIVTENYLEFGLETGFTNFSDSAMQFLEKQGLESQSPVSKLTFKFFLAIFCSFIG 240
           KAMAVLIVTENYLEFGLETGFTNFSDSAMQFLEKQGLESQSPVSKLTFKFFLAIFCSFIG
Sbjct: 181 KAMAVLIVTENYLEFGLETGFTNFSDSAMQFLEKQGLESQSPVSKLTFKFFLAIFCSFIG 240

Query: 241 AFLTFPGLRLAQMHLDALNLATEKITQTLLHINFLAPLFMVLLWVKPITKDYIMNPPLGK 300
           AFLTFPGLRLAQMHLDALNLATEKITQTLLHINFLAPLFMVLLWVKPITKDYIMNPPLGK
Sbjct: 241 AFLTFPGLRLAQMHLDALNLATEKITQTLLHINFLAPLFMVLLWVKPITKDYIMNPPLGK 300

Query: 301 ESIPLMTEATFDTLRLWLIILLCALRLAMMRSHLQAYLNLAQKCVDQMKKEAGRISTVEL 360
           ESIPLMTEATFDTLRLWLIILLCALRLAMMRSHLQAYLNLAQKCVDQMKKEAGRISTVEL
Sbjct: 301 ESIPLMTEATFDTLRLWLIILLCALRLAMMRSHLQAYLNLAQKCVDQMKKEAGRISTVEL 360

Query: 361 QKMVARVFYYLCVIALQYVAPLVMLLHTTLLLKTLGNHSWGIYPESISTLPVDNSLLSNS 420
           QKMVARVFYYLCVIALQYVAPLVMLLHTTLLLKTLGNHSWGIYPESISTLPVDNSLLSNS
Sbjct: 361 QKMVARVFYYLCVIALQYVAPLVMLLHTTLLLKTLGNHSWGIYPESISTLPVDNSLLSNS 420

Query: 421 VYSELPSAEGKMKVTVTQITVALSSLKNIFTPLLFRGLLSFLTWWIAACLFSTSLFGLFY 480
           VYSELPSAEGKMKVTVTQITVALSSLKNIFTPLLFRGLLSFLTWWIAACLFSTSLFGLFY
Sbjct: 421 VYSELPSAEGKMKVTVTQITVALSSLKNIFTPLLFRGLLSFLTWWIAACLFSTSLFGLFY 480

Query: 481 HQYLTVA 487
           HQYLTVA
Sbjct: 481 HQYLTVA 487


>gi|8923394 transmembrane protein 161A [Homo sapiens]
          Length = 479

 Score =  466 bits (1199), Expect = e-131
 Identities = 235/485 (48%), Positives = 333/485 (68%), Gaps = 10/485 (2%)

Query: 1   MGVIGIQLVVTMVMASVMQKIIPHYSLARWLLCNGSLRWYQHPTEEELRILAGKQQKGKT 60
           M V+G+QLVVT++ A++M ++ PH S ARWLLCNGSL  Y+HP+EEELR LAGK +  + 
Sbjct: 1   MAVLGVQLVVTLLTATLMHRLAPHCSFARWLLCNGSLFRYKHPSEEELRALAGKPRP-RG 59

Query: 61  KKDRKYNGHIESKPLTIPKDIDLHLETKSVTEVDTLALHYFPEYQWLVDFTVAATVVYLV 120
           +K+R  NG  E KPL++P+D    LET  +T VD L L +F EYQW VDF V +  VYL 
Sbjct: 60  RKERWANGLSEEKPLSVPRDAPFQLETCPLTTVDALVLRFFLEYQWFVDFAVYSGGVYLF 119

Query: 121 TEVYYNFMKPTQEMNISLVWCLLVLSFAIKVLFSLTTHYFKVEDGGERSVCVTFGFFFFV 180
           TE YY  + P +E NI++ WCLL ++F+IK+  ++T  YF  E+GGERSVC+TF F F +
Sbjct: 120 TEAYYYMLGPAKETNIAVFWCLLTVTFSIKMFLTVTRLYFSAEEGGERSVCLTFAFLFLL 179

Query: 181 KAMAVLIVTENYLEFGLETGFTNFSDSAMQFLEKQGLESQSPVSKLTFKFFLAIFCSFIG 240
            AM V +V E  LE GLE G  + + +    L+KQG +   PV+KL  +  LA+  S +G
Sbjct: 180 LAMLVQVVREETLELGLEPGLASMTQNLEPLLKKQGWDWALPVAKLAIRVGLAVVGSVLG 239

Query: 241 AFLTFPGLRLAQMHLDALNLATEK-ITQTLLHINFLAPLFMVLLWVKPITKDYIMNPPLG 299
           AFLTFPGLRLAQ H DAL ++ ++ + Q LLH +FL+PLF++ LW KPI +D++  PP G
Sbjct: 240 AFLTFPGLRLAQTHRDALTMSEDRPMLQFLLHTSFLSPLFILWLWTKPIARDFLHQPPFG 299

Query: 300 KESIPLMTEATFDTLRLWLIILLCALRLAMMRSHLQAYLNLAQKCVDQMKKEAGRISTVE 359
           +    L++++ FD+ RLWL+++LC LRLA+ R HLQAYL LA+  V+Q+++EAGRI   E
Sbjct: 300 ETRFSLLSDSAFDSGRLWLLVVLCLLRLAVTRPHLQAYLCLAKARVEQLRREAGRIEARE 359

Query: 360 LQKMVARVFYYLCVIALQYVAPLVMLLHTTLLLKTLGNHSWGIYPESISTLPVDNSLLSN 419
           +Q+ V RV+ Y+ V++LQY+ PL++ L+ TLLLKTLG +SWG+ P      P+ +   S+
Sbjct: 360 IQQRVVRVYCYVTVVSLQYLTPLILTLNCTLLLKTLGGYSWGLGP-----APLLSPDPSS 414

Query: 420 SVYSELPSAEGKMKVTVTQITVALSSLKNIFTPLLFRGLLSFLTWWIAACLFSTSLFGLF 479
           +  + + S E +++ T  +I  AL  L    TPL  RG+L++L WW AAC    SLFGL+
Sbjct: 415 ASAAPIGSGEDEVQQTAARIAGALGGL---LTPLFLRGVLAYLIWWTAACQLLASLFGLY 471

Query: 480 YHQYL 484
           +HQ+L
Sbjct: 472 FHQHL 476


>gi|23943900 transmembrane channel-like 8 [Homo sapiens]
          Length = 726

 Score = 33.1 bits (74), Expect = 0.58
 Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 5/82 (6%)

Query: 96  LALHYFPE-YQWLVDFTVAATVVYLVTEVYYNFMKPTQEMNISLVWCLLVLSFAIKVLFS 154
           L L Y P     LV+F       +LV    Y    P  E+N++L+WC +VL  A   +FS
Sbjct: 334 LLLQYLPPGVIALVNFLGPLLFTFLVQLENY---PPNTEVNLTLIWC-VVLKLASLGMFS 389

Query: 155 LTTHYFKVEDGGERSVCVTFGF 176
           ++     +  G ++S C ++G+
Sbjct: 390 VSLGQTILCIGRDKSSCESYGY 411


>gi|38708299 solute carrier family 29 (nucleoside transporters),
           member 2 [Homo sapiens]
          Length = 456

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 64/265 (24%), Positives = 98/265 (36%), Gaps = 44/265 (16%)

Query: 10  VTMVMASVMQKIIPHYSLARWLLCNGSLRWYQHPTEEELRILAGKQQKGKTKKDRKYNGH 69
           V ++M+ V    +PH   AR+ L N S +      E +  +L   +           NG 
Sbjct: 201 VGILMSIVCYLSLPHLKFARYYLANKSSQAQAQELETKAELLQSDE-----------NG- 248

Query: 70  IESKPLTIPKDIDLHLETKSVTEVDTLAL----HYFPEYQ--WL------VDFTVAATVV 117
           I S P  +   +DL LE +  +E D          F  +Q  WL      + FTV  +V 
Sbjct: 249 IPSSPQKVALTLDLDLEKEPESEPDEPQKPGKPSVFTVFQKIWLTALCLVLVFTVTLSVF 308

Query: 118 YLVTEVYYNFMKPTQEMNISLVWCLLVLSFAIKVLFSLTTHYFKVEDGGER----SVCVT 173
             +T +  +   P +        C  +L   +  L    T YF   D   R     VC+ 
Sbjct: 309 PAITAMVTSSTSPGKWSQFFNPICCFLLFNIMDWLGRSLTSYFLWPDEDSRLLPLLVCLR 368

Query: 174 FGF--FFFV------KAMAVLIVTENY-----LEFGLETGFTNFSDSAMQFLEKQGLESQ 220
           F F   F +        + +L   + Y     L F +  G+       M    +Q L  +
Sbjct: 369 FLFVPLFMLCHVPQRSRLPILFPQDAYFITFMLLFAVSNGY--LVSLTMCLAPRQVLPHE 426

Query: 221 SPVSKLTFKFFLAIFCSFIGAFLTF 245
             V+     FFLA+  S  GA L+F
Sbjct: 427 REVAGALMTFFLALGLS-CGASLSF 450


>gi|57165415 dolichyl pyrophosphate Glc1Man9GlcNAc2
           alpha-1,3-glucosyltransferase isoform b [Homo sapiens]
          Length = 467

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 6/126 (4%)

Query: 359 ELQKMVARVFYYLCVIALQYVAPLVMLLHTTL--LLKTLGNHSWGIYPESISTLPVDNSL 416
           +L ++ +R+F +   +   Y AP    L+  L  +L  +G     + P +I    + + L
Sbjct: 261 QLPQVFSRLFPFKRGLCHAYWAPNFWALYNALDKVLSVIGLKLKFLDPNNIPKASMTSGL 320

Query: 417 LSNSVYSELPSAEGKMKVTVTQITVALSSLKNIFTPLLFRGLLSFLTWWIAACLFSTSLF 476
           +    ++ LPS      +  T I +  S     F P   RG L  LT     C  S+ +F
Sbjct: 321 VQQFQHTVLPSVTPLATLICTLIAILPSIFCLWFKPQGPRGFLRCLT----LCALSSFMF 376

Query: 477 GLFYHQ 482
           G   H+
Sbjct: 377 GWHVHE 382


>gi|56121818 dolichyl pyrophosphate Glc1Man9GlcNAc2
           alpha-1,3-glucosyltransferase isoform a [Homo sapiens]
          Length = 526

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 6/126 (4%)

Query: 359 ELQKMVARVFYYLCVIALQYVAPLVMLLHTTL--LLKTLGNHSWGIYPESISTLPVDNSL 416
           +L ++ +R+F +   +   Y AP    L+  L  +L  +G     + P +I    + + L
Sbjct: 261 QLPQVFSRLFPFKRGLCHAYWAPNFWALYNALDKVLSVIGLKLKFLDPNNIPKASMTSGL 320

Query: 417 LSNSVYSELPSAEGKMKVTVTQITVALSSLKNIFTPLLFRGLLSFLTWWIAACLFSTSLF 476
           +    ++ LPS      +  T I +  S     F P   RG L  LT     C  S+ +F
Sbjct: 321 VQQFQHTVLPSVTPLATLICTLIAILPSIFCLWFKPQGPRGFLRCLT----LCALSSFMF 376

Query: 477 GLFYHQ 482
           G   H+
Sbjct: 377 GWHVHE 382


>gi|51873049 hypothetical protein LOC8603 [Homo sapiens]
          Length = 1224

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 6/67 (8%)

Query: 41   QHPTEEELRILAGKQQKGKTKKDRKYNGHIESKPLT---IPKDIDLHLETKSVTEVDTLA 97
            +H    +L +    Q KGK KK++K  G   +  +    +PKDIDL       TE +   
Sbjct: 1132 EHQQNSKLVLAESPQPKGKNKKNKKKKGDRVNNSIDDVFLPKDIDLDSVDMDETERE--- 1188

Query: 98   LHYFPEY 104
            + YF  +
Sbjct: 1189 VEYFKRF 1195


>gi|94681046 cyclin M4 [Homo sapiens]
          Length = 775

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 13/153 (8%)

Query: 300 KESIPLMTEATFDTLRLWLIILLCALRLAMMRSHLQAYLNLAQKCVDQMKKEAGRISTVE 359
           K+S+  M E     L LWL ILL  + L +  S + + LNL    +D M+    +    E
Sbjct: 166 KDSLLFMVEEPGRFLPLWLHILLITVLLVL--SGIFSGLNLGLMALDPMELRIVQNCGTE 223

Query: 360 LQKMVARVF--------YYLCVIALQYVAPLVMLLHTTLLLKTLGNHSWGIYPESISTLP 411
            ++  AR          Y LC + L  V  LV    T LL   +G+    +   +I  + 
Sbjct: 224 KERRYARKIEPIRRKGNYLLCSLLLGNV--LVNTSLTILLDNLIGSGLMAVASSTIG-IV 280

Query: 412 VDNSLLSNSVYSELPSAEGKMKVTVTQITVALS 444
           +   +L  ++ S    A G   + +T+  + L+
Sbjct: 281 IFGEILPQALCSRHGLAVGANTILLTKFFMLLT 313


>gi|33695104 G protein-coupled receptor 65 [Homo sapiens]
          Length = 337

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 16/40 (40%), Positives = 25/40 (62%)

Query: 416 LLSNSVYSELPSAEGKMKVTVTQITVALSSLKNIFTPLLF 455
           +L ++V  E  S  GK   T+ +ITVAL+SL  +  P+L+
Sbjct: 251 ILEHAVNFEDHSNSGKRTYTMYRITVALTSLNCVADPILY 290


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.327    0.138    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,312,121
Number of Sequences: 37866
Number of extensions: 660268
Number of successful extensions: 2138
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 2131
Number of HSP's gapped (non-prelim): 9
length of query: 487
length of database: 18,247,518
effective HSP length: 106
effective length of query: 381
effective length of database: 14,233,722
effective search space: 5423048082
effective search space used: 5423048082
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.