Search of human proteins with 22749287

Search of human proteins with 22749287

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|22749287 hypothetical protein LOC169966 [Homo sapiens]
         (389 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|22749287 hypothetical protein LOC169966 [Homo sapiens]             795   0.0  
gi|117414143 hypothetical protein LOC55603 [Homo sapiens]             464   e-131
gi|38570095 hypothetical protein LOC54855 [Homo sapiens]              450   e-127
gi|209862821 hypothetical protein LOC115572 [Homo sapiens]            378   e-105
gi|158508572 nuclear receptor subfamily 3, group C, member 2 [Ho...    29   6.3  
gi|166706915 GLIS family zinc finger 1 [Homo sapiens]                  29   6.3  
gi|38570142 membrane protein, palmitoylated 5 [Homo sapiens]           29   8.3  
gi|122937247 unc-13 homolog A [Homo sapiens]                           29   8.3  
gi|120587019 zinc finger protein 318 [Homo sapiens]                    29   8.3  

>gi|22749287 hypothetical protein LOC169966 [Homo sapiens]
          Length = 389

 Score =  795 bits (2053), Expect = 0.0
 Identities = 389/389 (100%), Positives = 389/389 (100%)

Query: 1   MSEIRFTNLTWDQVITLDQVLDEVIPIHGKGNFPTMEVKPKDIIHVVKDQLIGQGIIVKD 60
           MSEIRFTNLTWDQVITLDQVLDEVIPIHGKGNFPTMEVKPKDIIHVVKDQLIGQGIIVKD
Sbjct: 1   MSEIRFTNLTWDQVITLDQVLDEVIPIHGKGNFPTMEVKPKDIIHVVKDQLIGQGIIVKD 60

Query: 61  ARLNGSVASYILASHNGISYKDLDVIFGVELPGNEEFQVVKDAVLDCLLDFLPKDVKKEK 120
           ARLNGSVASYILASHNGISYKDLDVIFGVELPGNEEFQVVKDAVLDCLLDFLPKDVKKEK
Sbjct: 61  ARLNGSVASYILASHNGISYKDLDVIFGVELPGNEEFQVVKDAVLDCLLDFLPKDVKKEK 120

Query: 121 LSPDIMKDAYVQKLVKVCNGHDCWSLISLSNNTGKNLELKFVSSLRRQFEFSVDSFQIVL 180
           LSPDIMKDAYVQKLVKVCNGHDCWSLISLSNNTGKNLELKFVSSLRRQFEFSVDSFQIVL
Sbjct: 121 LSPDIMKDAYVQKLVKVCNGHDCWSLISLSNNTGKNLELKFVSSLRRQFEFSVDSFQIVL 180

Query: 181 DPMLDFYSDKNAKLTKESYPVVVAESMYGDFQEAMTHLQHKLICTRKPEEIRGGGLLKYC 240
           DPMLDFYSDKNAKLTKESYPVVVAESMYGDFQEAMTHLQHKLICTRKPEEIRGGGLLKYC
Sbjct: 181 DPMLDFYSDKNAKLTKESYPVVVAESMYGDFQEAMTHLQHKLICTRKPEEIRGGGLLKYC 240

Query: 241 SLLVHGFKPACMSEIKNLERYMCSRFFIDFPHIEEQQKKIESYLHNHFIGEGMTKYDYLM 300
           SLLVHGFKPACMSEIKNLERYMCSRFFIDFPHIEEQQKKIESYLHNHFIGEGMTKYDYLM
Sbjct: 241 SLLVHGFKPACMSEIKNLERYMCSRFFIDFPHIEEQQKKIESYLHNHFIGEGMTKYDYLM 300

Query: 301 TLHGVVNESTVCLMSYERRQILHLITMMALKVLGELNILPNTQKVTCFYQPAPYFAAEAR 360
           TLHGVVNESTVCLMSYERRQILHLITMMALKVLGELNILPNTQKVTCFYQPAPYFAAEAR
Sbjct: 301 TLHGVVNESTVCLMSYERRQILHLITMMALKVLGELNILPNTQKVTCFYQPAPYFAAEAR 360

Query: 361 YPIYVIPEPPPVSFQPYHPLHFRGSNGMS 389
           YPIYVIPEPPPVSFQPYHPLHFRGSNGMS
Sbjct: 361 YPIYVIPEPPPVSFQPYHPLHFRGSNGMS 389


>gi|117414143 hypothetical protein LOC55603 [Homo sapiens]
          Length = 442

 Score =  464 bits (1193), Expect = e-131
 Identities = 229/364 (62%), Positives = 282/364 (77%), Gaps = 2/364 (0%)

Query: 9   LTWDQVITLDQVLDEVIPIHGKGNFPTMEVKPKDIIHVVKDQLIGQGIIVKDARLNGSVA 68
           L W+QV  LD +L E IPIHG+GNFPT+E++P  I+ VV+ +L  + I V+D RLNGS A
Sbjct: 66  LNWEQVQRLDGILSETIPIHGRGNFPTLELQPSLIVKVVRRRLAEKRIGVRDVRLNGSAA 125

Query: 69  SYILASHNGISYKDLDVIFGVELPGNEEFQVVKDAVLDCLLDFLPKDVKKEKLSPDIMKD 128
           S++L   +G+ YKDLD+IF  +L G  EFQ VKD VLDCLLDFLP+ V KEK++P  +K+
Sbjct: 126 SHVLHQDSGLGYKDLDLIFCADLRGEGEFQTVKDVVLDCLLDFLPEGVNKEKITPLTLKE 185

Query: 129 AYVQKLVKVCNGHDCWSLISLSNNTGKNLELKFVSSLRRQFEFSVDSFQIVLDPMLDFYS 188
           AYVQK+VKVCN  D WSLISLSNN+GKN+ELKFV SLRRQFEFSVDSFQI LD +L FY 
Sbjct: 186 AYVQKMVKVCNDSDRWSLISLSNNSGKNVELKFVDSLRRQFEFSVDSFQIKLDSLLLFYE 245

Query: 189 DKNAKLTKESYPVVVAESMYGDFQEAMTHLQHKLICTRKPEEIRGGGLLKYCSLLVHGFK 248
                +T+  +P ++ ES+YGDFQEA  HL +K+I TR PEEIRGGGLLKYC+LLV GF+
Sbjct: 246 CSENPMTETFHPTIIGESVYGDFQEAFDHLCNKIIATRNPEEIRGGGLLKYCNLLVRGFR 305

Query: 249 PACMSEIKNLERYMCSRFFIDFPHIEEQQKKIESYLHNHFIGEGMTKYDYLMTLHGVVNE 308
           PA   EIK L+RYMCSRFFIDF  I EQQ+K+ESYL NHF+G    KY+YLMTLHGVVNE
Sbjct: 306 PA-SDEIKTLQRYMCSRFFIDFSDIGEQQRKLESYLQNHFVGLEDRKYEYLMTLHGVVNE 364

Query: 309 STVCLMSYERRQILHLITMMALKVLGELNILPNTQKVTCFYQPAPYFAAEARYPIYVIPE 368
           STVCLM +ERRQ L+LITM+A++VL + N++PN   VTC+YQPAPY  A+A +  Y I +
Sbjct: 365 STVCLMGHERRQTLNLITMLAIRVLADQNVIPNVANVTCYYQPAPY-VADANFSNYYIAQ 423

Query: 369 PPPV 372
             PV
Sbjct: 424 VQPV 427


>gi|38570095 hypothetical protein LOC54855 [Homo sapiens]
          Length = 391

 Score =  450 bits (1158), Expect = e-127
 Identities = 223/372 (59%), Positives = 275/372 (73%), Gaps = 1/372 (0%)

Query: 6   FTNLTWDQVITLDQVLDEVIPIHGKGNFPTMEVKPKDIIHVVKDQLIGQGIIVKDARLNG 65
           F+ L WDQV  L +VL EV+PIHG+GNFPT+E+  KDI+  V+ +L   GI V D RLNG
Sbjct: 14  FSVLNWDQVSRLHEVLTEVVPIHGRGNFPTLEITLKDIVQTVRSRLEEAGIKVHDVRLNG 73

Query: 66  SVASYILASHNGISYKDLDVIFGVELPGNEEFQVVKDAVLDCLLDFLPKDVKKEKLSPDI 125
           S A ++L   NG+  KDLD+IF V LP   EFQ+V+D VL  LL+FLP+ V K K+SP  
Sbjct: 74  SAAGHVLVKDNGLGCKDLDLIFHVALPTEAEFQLVRDVVLCSLLNFLPEGVNKLKISPVT 133

Query: 126 MKDAYVQKLVKVCNGHDCWSLISLSNNTGKNLELKFVSSLRRQFEFSVDSFQIVLDPMLD 185
           +K+AYVQKLVKVC   D WSLISLSN  GKN+ELKFV S+RRQFEFSVDSFQI+LD +L 
Sbjct: 134 LKEAYVQKLVKVCTDTDRWSLISLSNKNGKNVELKFVDSIRRQFEFSVDSFQIILDSLLF 193

Query: 186 FYSDKNAKLTKESYPVVVAESMYGDFQEAMTHLQHKLICTRKPEEIRGGGLLKYCSLLVH 245
           FY   N  +++  +P V+ ESMYGDF+EA  HLQ++LI T+ PEEIRGGGLLKY +LLV 
Sbjct: 194 FYDCSNNPISEHFHPTVIGESMYGDFEEAFDHLQNRLIATKNPEEIRGGGLLKYSNLLVR 253

Query: 246 GFKPACMSEIKNLERYMCSRFFIDFPHIEEQQKKIESYLHNHFIGEGMTKYDYLMTLHGV 305
            F+P    EIK LERYMCSRFFIDFP I EQQ+K+E+YL NHF  E  +KYDYLM L  V
Sbjct: 254 DFRPTDQEEIKTLERYMCSRFFIDFPDILEQQRKLETYLQNHFAEEERSKYDYLMILRRV 313

Query: 306 VNESTVCLMSYERRQILHLITMMALKVLGELNILPNTQKVTCFYQPAPYFAAEARYPIYV 365
           VNESTVCLM +ERRQ L+LI+++AL+VL E NI+P+   VTC+YQPAPY  ++  +  Y 
Sbjct: 314 VNESTVCLMGHERRQTLNLISLLALRVLAEQNIIPSATNVTCYYQPAPY-VSDGNFSNYY 372

Query: 366 IPEPPPVSFQPY 377
           +  PP    QPY
Sbjct: 373 VAHPPVTYSQPY 384


>gi|209862821 hypothetical protein LOC115572 [Homo sapiens]
          Length = 425

 Score =  378 bits (971), Expect = e-105
 Identities = 192/365 (52%), Positives = 250/365 (68%), Gaps = 3/365 (0%)

Query: 7   TNLTWDQVITLDQVLDEVIPIHGKGNFPTMEVKPKDIIHVVKDQLIGQGIIVKDARLNGS 66
           + L+W QV  LD +L E IPIHG+GNFPT+ V+P+ I+ VV+  L  QG+ V   RL+GS
Sbjct: 50  SGLSWPQVKRLDALLSEPIPIHGRGNFPTLSVQPRQIVQVVRSTLEEQGLHVHSVRLHGS 109

Query: 67  VASYILASHNGISYKDLDVIFGVELPGNEEFQVVKDAVLDCLLDFLPKDVKKEKLSPDIM 126
            AS++L   +G+ YKDLD++F V+L     FQ+ K  VL CLLDFLP  V + K++P  +
Sbjct: 110 AASHVLHPESGLGYKDLDLVFRVDLRSEASFQLTKAVVLACLLDFLPAGVSRAKITPLTL 169

Query: 127 KDAYVQKLVKVCNGHDCWSLISLSNNTGKNLELKFVSSLRRQFEFSVDSFQIVLDPMLDF 186
           K+AYVQKLVKVC   D WSLISLSN +GKN+ELKFV S+RRQFEFS+DSFQI+LD +L F
Sbjct: 170 KEAYVQKLVKVCTDSDRWSLISLSNKSGKNVELKFVDSVRRQFEFSIDSFQIILDSLLLF 229

Query: 187 YSDKNAKLTKESYPVVVAESMYGDFQEAMTHLQHKLICTRKPEEIRGGGLLKYCSLLVHG 246
               +  +++  +P V  ES+YGDF EA+ HL+H++I TR PEEIRGGGLLKYC LLV G
Sbjct: 230 GQCSSTPMSEAFHPTVTGESLYGDFTEALEHLRHRVIATRSPEEIRGGGLLKYCHLLVRG 289

Query: 247 FKPACMSEIKNLERYMCSRFFIDFPHIEEQQKKIESYLHNHFIG-EGMTKYDYLMTLHGV 305
           F+P   ++++ L+RYMCSRFFIDFP + EQ++ +E YL  HF G +   +Y  L+TLH V
Sbjct: 290 FRPRPSTDVRALQRYMCSRFFIDFPDLVEQRRTLERYLEAHFGGADAARRYACLVTLHRV 349

Query: 306 VNESTVCLMSYERRQILHLITMMALKVLGELNILPNTQKVTCFYQPAPYFAAEARYPIYV 365
           VNESTVCLM++ERRQ L LI  +AL+ L E    P       +  P       A    YV
Sbjct: 350 VNESTVCLMNHERRQTLDLIAALALQALAEQG--PAATAALAWRPPGTDGVVPATVNYYV 407

Query: 366 IPEPP 370
            P  P
Sbjct: 408 TPVQP 412


>gi|158508572 nuclear receptor subfamily 3, group C, member 2 [Homo
           sapiens]
          Length = 984

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 25/113 (22%), Positives = 55/113 (48%), Gaps = 19/113 (16%)

Query: 95  EEFQVVKDAVLDCLLDFLPKDVKKEKLSPDIMKDAYVQKLVKVCNGHDCWSLISLSNNTG 154
           EE+ ++K  +L   L  +PKD  K + + + M+  Y+++L K+        +    NN+G
Sbjct: 867 EEYTIMKVLLL---LSTIPKDGLKSQAAFEEMRTNYIKELRKM--------VTKCPNNSG 915

Query: 155 KNLELKFVSSLRRQFEFSVDSFQIVLDPMLD--FYSDKNAKLTKESYPVVVAE 205
           ++ +  +      Q    +DS   ++  +L+  FY+ + +   K  +P ++ E
Sbjct: 916 QSWQRFY------QLTKLLDSMHDLVSDLLEFCFYTFRESHALKVEFPAMLVE 962


>gi|166706915 GLIS family zinc finger 1 [Homo sapiens]
          Length = 620

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 15/43 (34%), Positives = 23/43 (53%)

Query: 330 LKVLGELNILPNTQKVTCFYQPAPYFAAEARYPIYVIPEPPPV 372
           LK LG   + P++Q  +   QP P   ++  YP +  P PPP+
Sbjct: 466 LKGLGPPPLPPSSQSHSPGGQPFPTLPSKPSYPPFQSPPPPPL 508


>gi|38570142 membrane protein, palmitoylated 5 [Homo sapiens]
          Length = 675

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 32/143 (22%), Positives = 61/143 (42%), Gaps = 16/143 (11%)

Query: 89  VELPGNEEFQVVKDAVLDCLLDFLPKDVKKEKLSPDIMKDAYVQKLVKVCNGHDCWSLIS 148
           V+L   EE Q  ++  +DC     P D+    +   I + A ++++ +         +  
Sbjct: 21  VDLASPEEHQKHREMAVDC-----PGDLGTRMMP--IRRSAQLERIRQQQE-----DMRR 68

Query: 149 LSNNTGKNLELKFVSSLRRQFEFSVDSFQIVLDPMLDFYSDKNAKLTKESYPVVVAESMY 208
                GK  EL   SS+R +    +     + +PM D  +++   L    Y V + E   
Sbjct: 69  RREEEGKKQELDLNSSMRLKKLAQIPPKTGIDNPMFD--TEEGIVLESPHYAVKILE--I 124

Query: 209 GDFQEAMTHLQHKLICTRKPEEI 231
            D   ++ H+QH L+ ++  E+I
Sbjct: 125 EDLFSSLKHIQHTLVDSQSQEDI 147


>gi|122937247 unc-13 homolog A [Homo sapiens]
          Length = 1791

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 29/152 (19%), Positives = 64/152 (42%), Gaps = 7/152 (4%)

Query: 71   ILASHNGISYKDLDVIFGVELPGNEEFQVVKDAVLDCLLDFLPKDVKKEKLSPDIMKDAY 130
            +L    G S K+LD    +        +  K++   CL  F P+++   K+S ++M + +
Sbjct: 1121 VLPEEQGPSIKNLDFWSKLITLIVSIIEEDKNSYTPCLNQF-PQELNVGKISAEVMWNLF 1179

Query: 131  VQKLVKVCNGHDCWSLISLSNNTGKNLELK-----FVSSLRRQFEFSVDSFQIVLDPMLD 185
             Q +      HD   L   ++    + ++K     +V+ L   F+  V  +    +P + 
Sbjct: 1180 AQDMKYAMEEHDKHRLCKSADYMNLHFKVKWLYNEYVTEL-PAFKDRVPEYPAWFEPFVI 1238

Query: 186  FYSDKNAKLTKESYPVVVAESMYGDFQEAMTH 217
             + D+N +++++     +       FQ+   H
Sbjct: 1239 QWLDENEEVSRDFLHGALERDKKDGFQQTSEH 1270


>gi|120587019 zinc finger protein 318 [Homo sapiens]
          Length = 2279

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)

Query: 339 LPNTQKVTCFYQP-APYFAAEARYPIYVIPEPPPVSFQPY 377
           LP+T  ++ F+ P A  FAA    P Y  P  PP SF  Y
Sbjct: 752 LPHTAALSQFHMPRASQFAAARIPPNYQGPAIPPASFDAY 791


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.139    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,232,613
Number of Sequences: 37866
Number of extensions: 687453
Number of successful extensions: 1474
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1467
Number of HSP's gapped (non-prelim): 9
length of query: 389
length of database: 18,247,518
effective HSP length: 104
effective length of query: 285
effective length of database: 14,309,454
effective search space: 4078194390
effective search space used: 4078194390
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.