Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 226342941
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|226342941 zinc finger, DHHC-type containing 15 isoform 2
[Homo sapiens]
(328 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|226342941 zinc finger, DHHC-type containing 15 isoform 2 [Hom... 702 0.0
gi|21450653 zinc finger, DHHC-type containing 15 isoform 1 [Homo... 694 0.0
gi|7705949 zinc finger, DHHC-type containing 2 [Homo sapiens] 405 e-113
gi|49457851 zinc finger, DHHC-type containing 20 [Homo sapiens] 388 e-108
gi|226342943 zinc finger, DHHC-type containing 15 isoform 3 [Hom... 248 4e-66
gi|32698692 zinc finger, DHHC domain containing 8 [Homo sapiens] 100 2e-21
gi|41152072 zinc finger, DHHC domain containing 5 [Homo sapiens] 100 2e-21
gi|206597479 zinc finger, DHHC-type containing 3 isoform 3 [Homo... 98 9e-21
gi|37594451 Abl-philin 2 isoform 2 [Homo sapiens] 97 2e-20
gi|224493964 zinc finger, DHHC-type containing 7 isoform 1 [Homo... 96 6e-20
gi|224493956 zinc finger, DHHC-type containing 7 isoform 2 [Homo... 96 6e-20
gi|206597477 zinc finger, DHHC-type containing 3 isoform 1 [Homo... 95 7e-20
gi|37594447 Abl-philin 2 isoform 4 [Homo sapiens] 95 7e-20
gi|37594449 Abl-philin 2 isoform 1 [Homo sapiens] 93 4e-19
gi|37594455 Abl-philin 2 isoform 1 [Homo sapiens] 93 4e-19
gi|7706133 zinc finger, DHHC-type containing 3 isoform 2 [Homo s... 90 2e-18
gi|24371241 zinc finger, DHHC-type containing 14 isoform 1 [Homo... 90 2e-18
gi|24371272 zinc finger, DHHC-type containing 14 isoform 2 [Homo... 90 2e-18
gi|45433499 zinc finger, DHHC-type containing 18 [Homo sapiens] 90 3e-18
gi|56682974 zinc finger, DHHC domain containing 9 [Homo sapiens] 86 3e-17
gi|56682972 zinc finger, DHHC domain containing 9 [Homo sapiens] 86 3e-17
gi|30425538 zinc finger, DHHC-type containing 21 [Homo sapiens] 86 5e-17
gi|11968053 zinc finger, DHHC-type containing 6 [Homo sapiens] 80 2e-15
gi|103471993 huntingtin interacting protein 14 [Homo sapiens] 78 1e-14
gi|21361910 zinc finger, DHHC domain containing 12 [Homo sapiens] 78 1e-14
gi|88900493 zinc finger, DHHC domain containing 19 [Homo sapiens] 73 3e-13
gi|50234886 zinc finger, DHHC domain containing 23 [Homo sapiens] 71 1e-12
gi|47933348 zinc finger, DHHC domain containing 13 isoform 2 [Ho... 71 2e-12
gi|47933346 zinc finger, DHHC domain containing 13 isoform 1 [Ho... 71 2e-12
gi|197304690 zinc finger, DHHC-type containing 4 [Homo sapiens] 71 2e-12
>gi|226342941 zinc finger, DHHC-type containing 15 isoform 2 [Homo
sapiens]
Length = 328
Score = 702 bits (1811), Expect = 0.0
Identities = 328/328 (100%), Positives = 328/328 (100%)
Query: 1 MRRGWKMALSGGLRCCRRVLSWVPVLVIVLVVLWSYYAYVFELCLVIYLILYHAIFVFFT 60
MRRGWKMALSGGLRCCRRVLSWVPVLVIVLVVLWSYYAYVFELCLVIYLILYHAIFVFFT
Sbjct: 1 MRRGWKMALSGGLRCCRRVLSWVPVLVIVLVVLWSYYAYVFELCLVIYLILYHAIFVFFT 60
Query: 61 WTYWKSIFTLPQQPNQKFHLSYTDKERYENEERPEVQKQMLVDMAKKLPVYTRTGSGAVR 120
WTYWKSIFTLPQQPNQKFHLSYTDKERYENEERPEVQKQMLVDMAKKLPVYTRTGSGAVR
Sbjct: 61 WTYWKSIFTLPQQPNQKFHLSYTDKERYENEERPEVQKQMLVDMAKKLPVYTRTGSGAVR 120
Query: 121 FCDRCHLIKPDRCHHCSVCAMCVLKMDHHCPWVNNCIGFSNYKFFLQFLAYSVLYCLYIA 180
FCDRCHLIKPDRCHHCSVCAMCVLKMDHHCPWVNNCIGFSNYKFFLQFLAYSVLYCLYIA
Sbjct: 121 FCDRCHLIKPDRCHHCSVCAMCVLKMDHHCPWVNNCIGFSNYKFFLQFLAYSVLYCLYIA 180
Query: 181 TTVFSYFIKYWRGELPSVRSKFHVLFLLFVACMFFVSLVILFGYHCWLVSRNKTTLEAFC 240
TTVFSYFIKYWRGELPSVRSKFHVLFLLFVACMFFVSLVILFGYHCWLVSRNKTTLEAFC
Sbjct: 181 TTVFSYFIKYWRGELPSVRSKFHVLFLLFVACMFFVSLVILFGYHCWLVSRNKTTLEAFC 240
Query: 241 TPVFTSGPEKNGFNLGFIKNIQQVFGDKKKFWLIPIGSSPGDGHSFPMRSMNESQNPLLA 300
TPVFTSGPEKNGFNLGFIKNIQQVFGDKKKFWLIPIGSSPGDGHSFPMRSMNESQNPLLA
Sbjct: 241 TPVFTSGPEKNGFNLGFIKNIQQVFGDKKKFWLIPIGSSPGDGHSFPMRSMNESQNPLLA 300
Query: 301 NEETWEDNEDDNQDYPEGSSSLAVETET 328
NEETWEDNEDDNQDYPEGSSSLAVETET
Sbjct: 301 NEETWEDNEDDNQDYPEGSSSLAVETET 328
>gi|21450653 zinc finger, DHHC-type containing 15 isoform 1 [Homo
sapiens]
Length = 337
Score = 694 bits (1791), Expect = 0.0
Identities = 328/337 (97%), Positives = 328/337 (97%), Gaps = 9/337 (2%)
Query: 1 MRRGWKMALSGGLRCCRRVLSWVPVLVIVLVVLWSYYAYVFELCLV---------IYLIL 51
MRRGWKMALSGGLRCCRRVLSWVPVLVIVLVVLWSYYAYVFELCLV IYLIL
Sbjct: 1 MRRGWKMALSGGLRCCRRVLSWVPVLVIVLVVLWSYYAYVFELCLVTVLSPAEKVIYLIL 60
Query: 52 YHAIFVFFTWTYWKSIFTLPQQPNQKFHLSYTDKERYENEERPEVQKQMLVDMAKKLPVY 111
YHAIFVFFTWTYWKSIFTLPQQPNQKFHLSYTDKERYENEERPEVQKQMLVDMAKKLPVY
Sbjct: 61 YHAIFVFFTWTYWKSIFTLPQQPNQKFHLSYTDKERYENEERPEVQKQMLVDMAKKLPVY 120
Query: 112 TRTGSGAVRFCDRCHLIKPDRCHHCSVCAMCVLKMDHHCPWVNNCIGFSNYKFFLQFLAY 171
TRTGSGAVRFCDRCHLIKPDRCHHCSVCAMCVLKMDHHCPWVNNCIGFSNYKFFLQFLAY
Sbjct: 121 TRTGSGAVRFCDRCHLIKPDRCHHCSVCAMCVLKMDHHCPWVNNCIGFSNYKFFLQFLAY 180
Query: 172 SVLYCLYIATTVFSYFIKYWRGELPSVRSKFHVLFLLFVACMFFVSLVILFGYHCWLVSR 231
SVLYCLYIATTVFSYFIKYWRGELPSVRSKFHVLFLLFVACMFFVSLVILFGYHCWLVSR
Sbjct: 181 SVLYCLYIATTVFSYFIKYWRGELPSVRSKFHVLFLLFVACMFFVSLVILFGYHCWLVSR 240
Query: 232 NKTTLEAFCTPVFTSGPEKNGFNLGFIKNIQQVFGDKKKFWLIPIGSSPGDGHSFPMRSM 291
NKTTLEAFCTPVFTSGPEKNGFNLGFIKNIQQVFGDKKKFWLIPIGSSPGDGHSFPMRSM
Sbjct: 241 NKTTLEAFCTPVFTSGPEKNGFNLGFIKNIQQVFGDKKKFWLIPIGSSPGDGHSFPMRSM 300
Query: 292 NESQNPLLANEETWEDNEDDNQDYPEGSSSLAVETET 328
NESQNPLLANEETWEDNEDDNQDYPEGSSSLAVETET
Sbjct: 301 NESQNPLLANEETWEDNEDDNQDYPEGSSSLAVETET 337
>gi|7705949 zinc finger, DHHC-type containing 2 [Homo sapiens]
Length = 367
Score = 405 bits (1042), Expect = e-113
Identities = 191/360 (53%), Positives = 243/360 (67%), Gaps = 41/360 (11%)
Query: 10 SGGLRCCRRVLSWVPVLVIVLVVLWSYYAYVFELCLV---------IYLILYHAIFVFFT 60
S R CRRVL W+PV+ I L++ WSYYAY +LC+V + L+ YH +F F
Sbjct: 8 SSARRRCRRVLYWIPVVFITLLLGWSYYAYAIQLCIVSMENTGEQVVCLMAYHLLFAMFV 67
Query: 61 WTYWKSIFTLPQQPNQKFHLSYTDKERYENEERPEVQKQMLVDMAKKLPVYTRTGSGAVR 120
W+YWK+IFTLP P+++FHLSY +K+ E E R E +++L AK LP+YTRT SGA+R
Sbjct: 68 WSYWKTIFTLPMNPSKEFHLSYAEKDLLEREPRGEAHQEVLRRAAKDLPIYTRTMSGAIR 127
Query: 121 FCDRCHLIKPDRCHHCSVCAMCVLKMDHHCPWVNNCIGFSNYKFFLQFLAYSVLYCLYIA 180
+CDRC LIKPDRCHHCSVC C+LKMDHHCPWVNNC+GFSNYKFFL FLAYS+LYCL+IA
Sbjct: 128 YCDRCQLIKPDRCHHCSVCDKCILKMDHHCPWVNNCVGFSNYKFFLLFLAYSLLYCLFIA 187
Query: 181 TTVFSYFIKYWRGELPSVRSKFHVLFLLFVACMFFVSLVILFGYHCWLVSRNKTTLEAFC 240
T YFIK+W LP ++KFH++FL F A MF VSL LFGYHCWLVS+NK+TLEAF
Sbjct: 188 ATDLQYFIKFWTNGLPDTQAKFHIMFLFFAAAMFSVSLSSLFGYHCWLVSKNKSTLEAFR 247
Query: 241 TPVFTSGPEKNGFNLGFIKNIQQVFGDKKKFWLIPIGSSPGDG----------------- 283
+PVF G +KNGF+LGF KN++QVFGD+KK+WL+PI SS GDG
Sbjct: 248 SPVFRHGTDKNGFSLGFSKNMRQVFGDEKKYWLLPIFSSLGDGCSFPTCLVNQDPEQAST 307
Query: 284 -------------HSFPMRSMNESQNPLLANEETWEDNEDDNQDYPEGSS--SLAVETET 328
H FP + + ESQ+ LL + ++W ++ + G S +L +E ET
Sbjct: 308 PAGLNSTAKNLENHQFPAKPLRESQSHLLTDSQSWTESSINPGKCKAGMSNPALTMENET 367
>gi|49457851 zinc finger, DHHC-type containing 20 [Homo sapiens]
Length = 354
Score = 388 bits (997), Expect = e-108
Identities = 172/315 (54%), Positives = 222/315 (70%), Gaps = 12/315 (3%)
Query: 14 RCCRRVLSWVPVLVIVLVVLWSYYAYVFELCL------------VIYLILYHAIFVFFTW 61
RCC+RV+ WVPVL I VV+WSYYAYV ELC+ V+YL+ +H FV F W
Sbjct: 8 RCCQRVVGWVPVLFITFVVVWSYYAYVVELCVFTIFGNEENGKTVVYLVAFHLFFVMFVW 67
Query: 62 TYWKSIFTLPQQPNQKFHLSYTDKERYENEERPEVQKQMLVDMAKKLPVYTRTGSGAVRF 121
+YW +IFT P P+++F+LS ++KERYE E E Q+++L A+ LP+YT + S +R+
Sbjct: 68 SYWMTIFTSPASPSKEFYLSNSEKERYEKEFSQERQQEILRRAARALPIYTTSASKTIRY 127
Query: 122 CDRCHLIKPDRCHHCSVCAMCVLKMDHHCPWVNNCIGFSNYKFFLQFLAYSVLYCLYIAT 181
C++C LIKPDR HHCS C C+LKMDHHCPWVNNC+GFSNYKFFL FL YS+LYCL++A
Sbjct: 128 CEKCQLIKPDRAHHCSACDSCILKMDHHCPWVNNCVGFSNYKFFLLFLLYSLLYCLFVAA 187
Query: 182 TVFSYFIKYWRGELPSVRSKFHVLFLLFVACMFFVSLVILFGYHCWLVSRNKTTLEAFCT 241
TV YFIK+W EL R+KFHVLFL FV+ MFF+S++ LF YHCWLV +N+TT+E+F
Sbjct: 188 TVLEYFIKFWTNELTDTRAKFHVLFLFFVSAMFFISVLSLFSYHCWLVGKNRTTIESFRA 247
Query: 242 PVFTSGPEKNGFNLGFIKNIQQVFGDKKKFWLIPIGSSPGDGHSFPMRSMNESQNPLLAN 301
P F+ GP+ NGF+LG KN +QVFGD+KK+WL+PI SS GDG SFP R +
Sbjct: 248 PTFSYGPDGNGFSLGCSKNWRQVFGDEKKYWLLPIFSSLGDGCSFPTRLVGMDPEQASVT 307
Query: 302 EETWEDNEDDNQDYP 316
+ NQ +P
Sbjct: 308 NQNEYARSGSNQPFP 322
>gi|226342943 zinc finger, DHHC-type containing 15 isoform 3 [Homo
sapiens]
Length = 143
Score = 248 bits (634), Expect = 4e-66
Identities = 117/117 (100%), Positives = 117/117 (100%)
Query: 1 MRRGWKMALSGGLRCCRRVLSWVPVLVIVLVVLWSYYAYVFELCLVIYLILYHAIFVFFT 60
MRRGWKMALSGGLRCCRRVLSWVPVLVIVLVVLWSYYAYVFELCLVIYLILYHAIFVFFT
Sbjct: 1 MRRGWKMALSGGLRCCRRVLSWVPVLVIVLVVLWSYYAYVFELCLVIYLILYHAIFVFFT 60
Query: 61 WTYWKSIFTLPQQPNQKFHLSYTDKERYENEERPEVQKQMLVDMAKKLPVYTRTGSG 117
WTYWKSIFTLPQQPNQKFHLSYTDKERYENEERPEVQKQMLVDMAKKLPVYTRTGSG
Sbjct: 61 WTYWKSIFTLPQQPNQKFHLSYTDKERYENEERPEVQKQMLVDMAKKLPVYTRTGSG 117
>gi|32698692 zinc finger, DHHC domain containing 8 [Homo sapiens]
Length = 765
Score = 100 bits (249), Expect = 2e-21
Identities = 54/146 (36%), Positives = 79/146 (54%), Gaps = 5/146 (3%)
Query: 119 VRFCDRCHLIKPDRCHHCSVCAMCVLKMDHHCPWVNNCIGFSNYKFFLQFLAYSVLYCLY 178
+++C CH +P RC HCSVC CV DHHCPWVNNCIG NY++F FL + +
Sbjct: 103 MKWCATCHFYRPPRCSHCSVCDNCVEDFDHHCPWVNNCIGRRNYRYFFLFLLSLSAHMVG 162
Query: 179 IATTVFSYFIKYWRGELPSVRSKFHVLFLLFVACMFFVSLVILFGYHCWLVSRNKTTLEA 238
+ Y + + G L + + + ++ VA +FF+ ++ L G+H LV+R +TT E
Sbjct: 163 VVAFGLVYVLNHAEG-LGAAHTTI-TMAVMCVAGLFFIPVIGLTGFHVVLVTRGRTTNEQ 220
Query: 239 FCTPVFTSGPEKNGFNLGFIKNIQQV 264
T F G N F G N++ V
Sbjct: 221 -VTGKFRGG--VNPFTRGCCGNVEHV 243
>gi|41152072 zinc finger, DHHC domain containing 5 [Homo sapiens]
Length = 715
Score = 100 bits (248), Expect = 2e-21
Identities = 57/149 (38%), Positives = 81/149 (54%), Gaps = 11/149 (7%)
Query: 119 VRFCDRCHLIKPDRCHHCSVCAMCVLKMDHHCPWVNNCIGFSNYKFFLQFLAYSVLYCLY 178
+++C C +P RC HCSVC CV + DHHCPWVNNCIG NY++F FL + +
Sbjct: 103 MKWCATCRFYRPPRCSHCSVCDNCVEEFDHHCPWVNNCIGRRNYRYFFLFLLSLTAHIM- 161
Query: 179 IATTVFSY---FIKYWRGELPSVRSKFHVLFLLFVACMFFVSLVILFGYHCWLVSRNKTT 235
VF + ++ Y EL VR+ + ++ VA +FF+ + L G+H LV+R +TT
Sbjct: 162 ---GVFGFGLLYVLYHIEELSGVRTAV-TMAVMCVAGLFFIPVAGLTGFHVVLVARGRTT 217
Query: 236 LEAFCTPVFTSGPEKNGFNLGFIKNIQQV 264
E T F G N F G N+ +V
Sbjct: 218 NEQ-VTGKFRGG--VNPFTNGCCNNVSRV 243
>gi|206597479 zinc finger, DHHC-type containing 3 isoform 3 [Homo
sapiens]
Length = 329
Score = 98.2 bits (243), Expect = 9e-21
Identities = 60/200 (30%), Positives = 94/200 (47%), Gaps = 15/200 (7%)
Query: 122 CDRCHLIKPDRCHHCSVCAMCVLKMDHHCPWVNNCIGFSNYKFFLQFLAYSVLYCLYIAT 181
C +C IKPDR HHCSVC C+ KMDHHCPWVNNC+G +N K+F+ F Y L L+
Sbjct: 129 CPKCCSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVGENNQKYFVLFTMYIALISLHALI 188
Query: 182 TVFSYFIKYWRGELPSVRS------KFHVLFLLFVACMFFVSLVILFGYHCWLVSRNKTT 235
V +F+ + + S ++ L F +F + ++FG + ++T
Sbjct: 189 MVGFHFLHCFEEDWTKCSSFSPPTTVILLILLCFEGLLFLIFTSVMFGTQVHSICTDETG 248
Query: 236 LEAFCTPVFTSGPEKNGFNLGFIKNIQQVF-GDKKKFWLIPIGSSPGDGHSFPMRSMNES 294
+E + ++G +++++ F GD W P S P P
Sbjct: 249 IERL------KRKNQPREHMGSWQSVKETFGGDFSLNWFNPF-SRPCQ-PEIPSDKDMVR 300
Query: 295 QNPLLANEETWEDNEDDNQD 314
Q L++ ET ED ++ +D
Sbjct: 301 QVTSLSDTETMEDPSEETKD 320
>gi|37594451 Abl-philin 2 isoform 2 [Homo sapiens]
Length = 361
Score = 97.1 bits (240), Expect = 2e-20
Identities = 69/278 (24%), Positives = 120/278 (43%), Gaps = 48/278 (17%)
Query: 19 VLSWVPVLVIVLVVLWS----YYAYVFELCLVIYLILYHAIFVFFTWTYWKSIFTLPQQP 74
V+ W V+ +VLV++ + AY+ L L++ + F +++W I +
Sbjct: 75 VIRWFGVVFVVLVIVLTGSIVAIAYLCVLPLILRTYSVPRLCWHFFYSHWNLILIVFH-- 132
Query: 75 NQKFHLSYTDKERYENEERPEVQKQMLVDMAKKLPVYTRTGSGAVRFCDRCHLIKPDRCH 134
++ + T Y + R ++ V C +C KP R H
Sbjct: 133 ---YYQAITTPPGYPPQGRNDI--------------------ATVSICKKCIYPKPARTH 169
Query: 135 HCSVCAMCVLKMDHHCPWVNNCIGFSNYKFFLQFLAYSVLYCLYIATTVFSYFIKYWRG- 193
HCS+C CVLKMDHHCPW+NNC+G N+++F F + L C+Y + + F + +
Sbjct: 170 HCSICNRCVLKMDHHCPWLNNCVGHYNHRYFFSFCFFMTLGCVYCSYGSWDLFREAYAAI 229
Query: 194 ----ELPSVRSKFH-------VLFLLFVACMFFVSLVILFGYHCWLVSRNKTTLEAFCTP 242
+ P F +++L F+ ++L L +H L+SR +T++E
Sbjct: 230 ETYHQTPPPTFSFRERMTHKSLVYLWFLCSSVALALGALTVWHAVLISRGETSIERHINK 289
Query: 243 VFTSGPE------KNGFNLGFIKNIQQVFG-DKKKFWL 273
+ +N +N G + N + G D + WL
Sbjct: 290 KERRRLQAKGRVFRNPYNYGCLDNWKVFLGVDTGRHWL 327
>gi|224493964 zinc finger, DHHC-type containing 7 isoform 1 [Homo
sapiens]
Length = 345
Score = 95.5 bits (236), Expect = 6e-20
Identities = 45/122 (36%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 122 CDRCHLIKPDRCHHCSVCAMCVLKMDHHCPWVNNCIGFSNYKFFLQFLAYSVLYCLYIAT 181
C +C IKP+R HHCS+C C+ KMDHHCPWVNNC+G N +FF+ F Y L ++
Sbjct: 169 CPKCCCIKPERAHHCSICKRCIRKMDHHCPWVNNCVGEKNQRFFVLFTMYIALSSVHALI 228
Query: 182 TVFSYFIKYWRG---ELPSVRSKFHVLFLLFV---ACMFFVSLVILFGYHCWLVSRNKTT 235
FI RG E V+ L+F+ +FF ++FG + ++T
Sbjct: 229 LCGFQFISCVRGQWTECSDFSPPITVILLIFLCLEGLLFFTFTAVMFGTQIHSICNDETE 288
Query: 236 LE 237
+E
Sbjct: 289 IE 290
>gi|224493956 zinc finger, DHHC-type containing 7 isoform 2 [Homo
sapiens]
Length = 308
Score = 95.5 bits (236), Expect = 6e-20
Identities = 45/122 (36%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 122 CDRCHLIKPDRCHHCSVCAMCVLKMDHHCPWVNNCIGFSNYKFFLQFLAYSVLYCLYIAT 181
C +C IKP+R HHCS+C C+ KMDHHCPWVNNC+G N +FF+ F Y L ++
Sbjct: 132 CPKCCCIKPERAHHCSICKRCIRKMDHHCPWVNNCVGEKNQRFFVLFTMYIALSSVHALI 191
Query: 182 TVFSYFIKYWRG---ELPSVRSKFHVLFLLFV---ACMFFVSLVILFGYHCWLVSRNKTT 235
FI RG E V+ L+F+ +FF ++FG + ++T
Sbjct: 192 LCGFQFISCVRGQWTECSDFSPPITVILLIFLCLEGLLFFTFTAVMFGTQIHSICNDETE 251
Query: 236 LE 237
+E
Sbjct: 252 IE 253
>gi|206597477 zinc finger, DHHC-type containing 3 isoform 1 [Homo
sapiens]
Length = 299
Score = 95.1 bits (235), Expect = 7e-20
Identities = 44/122 (36%), Positives = 65/122 (53%), Gaps = 6/122 (4%)
Query: 122 CDRCHLIKPDRCHHCSVCAMCVLKMDHHCPWVNNCIGFSNYKFFLQFLAYSVLYCLYIAT 181
C +C IKPDR HHCSVC C+ KMDHHCPWVNNC+G +N K+F+ F Y L L+
Sbjct: 129 CPKCCSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVGENNQKYFVLFTMYIALISLHALI 188
Query: 182 TVFSYFIKYWRGELPSVRS------KFHVLFLLFVACMFFVSLVILFGYHCWLVSRNKTT 235
V +F+ + + S ++ L F +F + ++FG + ++T
Sbjct: 189 MVGFHFLHCFEEDWTKCSSFSPPTTVILLILLCFEGLLFLIFTSVMFGTQVHSICTDETG 248
Query: 236 LE 237
+E
Sbjct: 249 IE 250
>gi|37594447 Abl-philin 2 isoform 4 [Homo sapiens]
Length = 296
Score = 95.1 bits (235), Expect = 7e-20
Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 19/180 (10%)
Query: 113 RTGSGAVRFCDRCHLIKPDRCHHCSVCAMCVLKMDHHCPWVNNCIGFSNYKFFLQFLAYS 172
R V C +C KP R HHCS+C CVLKMDHHCPW+NNC+G N+++F F +
Sbjct: 83 RNDIATVSICKKCIYPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHRYFFSFCFFM 142
Query: 173 VLYCLYIATTVFSYFIKYWRG-----ELPSVRSKFH-------VLFLLFVACMFFVSLVI 220
L C+Y + + F + + + P F +++L F+ ++L
Sbjct: 143 TLGCVYCSYGSWDLFREAYAAIETYHQTPPPTFSFRERMTHKSLVYLWFLCSSVALALGA 202
Query: 221 LFGYHCWLVSRNKTTLEAFCTPVFTSGPE------KNGFNLGFIKNIQQVFG-DKKKFWL 273
L +H L+SR +T++E + +N +N G + N + G D + WL
Sbjct: 203 LTVWHAVLISRGETSIERHINKKERRRLQAKGRVFRNPYNYGCLDNWKVFLGVDTGRHWL 262
>gi|37594449 Abl-philin 2 isoform 1 [Homo sapiens]
Length = 377
Score = 92.8 bits (229), Expect = 4e-19
Identities = 69/294 (23%), Positives = 125/294 (42%), Gaps = 64/294 (21%)
Query: 19 VLSWVPVLVIVLVVLWS----YYAYVFELCLVIYLILYHAIFVFFTWTYWKSIFTLPQQP 74
V+ W V+ +VLV++ + AY+ L L++ + F +++W I +
Sbjct: 75 VIRWFGVVFVVLVIVLTGSIVAIAYLCVLPLILRTYSVPRLCWHFFYSHWNLILIVFH-- 132
Query: 75 NQKFHLSYTDKERYENEERPEVQKQMLVDMAKKLPVYTRTGSGAVRFCDRCHLIKPDRCH 134
++ + T Y + R ++ V C +C KP R H
Sbjct: 133 ---YYQAITTPPGYPPQGRNDI--------------------ATVSICKKCIYPKPARTH 169
Query: 135 HCSVCAMCVLKMDHHCPWVNNCIGFSNYKFFLQFLAYSVLYCLYIATTVFSYFIKYW--- 191
HCS+C CVLKMDHHCPW+NNC+G N+++F F + L C+Y + + F + +
Sbjct: 170 HCSICNRCVLKMDHHCPWLNNCVGHYNHRYFFSFCFFMTLGCVYCSYGSWDLFREAYAAI 229
Query: 192 -------RGELPSVRSKFH------------------VLFLLFVACMFFVSLVILFGYHC 226
+ +L +V ++ + +++L F+ ++L L +H
Sbjct: 230 EKMKQLDKNKLQAVANQTYHQTPPPTFSFRERMTHKSLVYLWFLCSSVALALGALTVWHA 289
Query: 227 WLVSRNKTTLEAFCTPVFTSGPE------KNGFNLGFIKNIQQVFG-DKKKFWL 273
L+SR +T++E + +N +N G + N + G D + WL
Sbjct: 290 VLISRGETSIERHINKKERRRLQAKGRVFRNPYNYGCLDNWKVFLGVDTGRHWL 343
>gi|37594455 Abl-philin 2 isoform 1 [Homo sapiens]
Length = 377
Score = 92.8 bits (229), Expect = 4e-19
Identities = 69/294 (23%), Positives = 125/294 (42%), Gaps = 64/294 (21%)
Query: 19 VLSWVPVLVIVLVVLWS----YYAYVFELCLVIYLILYHAIFVFFTWTYWKSIFTLPQQP 74
V+ W V+ +VLV++ + AY+ L L++ + F +++W I +
Sbjct: 75 VIRWFGVVFVVLVIVLTGSIVAIAYLCVLPLILRTYSVPRLCWHFFYSHWNLILIVFH-- 132
Query: 75 NQKFHLSYTDKERYENEERPEVQKQMLVDMAKKLPVYTRTGSGAVRFCDRCHLIKPDRCH 134
++ + T Y + R ++ V C +C KP R H
Sbjct: 133 ---YYQAITTPPGYPPQGRNDI--------------------ATVSICKKCIYPKPARTH 169
Query: 135 HCSVCAMCVLKMDHHCPWVNNCIGFSNYKFFLQFLAYSVLYCLYIATTVFSYFIKYW--- 191
HCS+C CVLKMDHHCPW+NNC+G N+++F F + L C+Y + + F + +
Sbjct: 170 HCSICNRCVLKMDHHCPWLNNCVGHYNHRYFFSFCFFMTLGCVYCSYGSWDLFREAYAAI 229
Query: 192 -------RGELPSVRSKFH------------------VLFLLFVACMFFVSLVILFGYHC 226
+ +L +V ++ + +++L F+ ++L L +H
Sbjct: 230 EKMKQLDKNKLQAVANQTYHQTPPPTFSFRERMTHKSLVYLWFLCSSVALALGALTVWHA 289
Query: 227 WLVSRNKTTLEAFCTPVFTSGPE------KNGFNLGFIKNIQQVFG-DKKKFWL 273
L+SR +T++E + +N +N G + N + G D + WL
Sbjct: 290 VLISRGETSIERHINKKERRRLQAKGRVFRNPYNYGCLDNWKVFLGVDTGRHWL 343
>gi|7706133 zinc finger, DHHC-type containing 3 isoform 2 [Homo
sapiens]
Length = 327
Score = 90.1 bits (222), Expect = 2e-18
Identities = 36/67 (53%), Positives = 45/67 (67%)
Query: 122 CDRCHLIKPDRCHHCSVCAMCVLKMDHHCPWVNNCIGFSNYKFFLQFLAYSVLYCLYIAT 181
C +C IKPDR HHCSVC C+ KMDHHCPWVNNC+G +N K+F+ F Y L L+
Sbjct: 129 CPKCCSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVGENNQKYFVLFTMYIALISLHALI 188
Query: 182 TVFSYFI 188
V +F+
Sbjct: 189 MVGFHFL 195
>gi|24371241 zinc finger, DHHC-type containing 14 isoform 1 [Homo
sapiens]
Length = 488
Score = 90.1 bits (222), Expect = 2e-18
Identities = 46/122 (37%), Positives = 68/122 (55%), Gaps = 4/122 (3%)
Query: 119 VRFCDRCHLIKPDRCHHCSVCAMCVLKMDHHCPWVNNCIGFSNYKFFLQFLAYSVLYCLY 178
+++C C + +P R HCS+C CV + DHHCPWV NC+G NY+FF F+ ++
Sbjct: 164 LKYCFTCKIFRPPRASHCSLCDNCVERFDHHCPWVGNCVGKRNYRFFYMFILSLSFLTVF 223
Query: 179 IATTVFSYFI--KYWRGELPSVRSKFHVLFLLFVACMFFV-SLVILFGYHCWLVSRNKTT 235
I V ++ I G L +++ L V C F V S+V L G+H +L+S N+TT
Sbjct: 224 IFAFVITHVILRSQQTGFLNALKDS-PASVLEAVVCFFSVWSIVGLSGFHTYLISSNQTT 282
Query: 236 LE 237
E
Sbjct: 283 NE 284
>gi|24371272 zinc finger, DHHC-type containing 14 isoform 2 [Homo
sapiens]
Length = 473
Score = 90.1 bits (222), Expect = 2e-18
Identities = 46/122 (37%), Positives = 68/122 (55%), Gaps = 4/122 (3%)
Query: 119 VRFCDRCHLIKPDRCHHCSVCAMCVLKMDHHCPWVNNCIGFSNYKFFLQFLAYSVLYCLY 178
+++C C + +P R HCS+C CV + DHHCPWV NC+G NY+FF F+ ++
Sbjct: 164 LKYCFTCKIFRPPRASHCSLCDNCVERFDHHCPWVGNCVGKRNYRFFYMFILSLSFLTVF 223
Query: 179 IATTVFSYFI--KYWRGELPSVRSKFHVLFLLFVACMFFV-SLVILFGYHCWLVSRNKTT 235
I V ++ I G L +++ L V C F V S+V L G+H +L+S N+TT
Sbjct: 224 IFAFVITHVILRSQQTGFLNALKDS-PASVLEAVVCFFSVWSIVGLSGFHTYLISSNQTT 282
Query: 236 LE 237
E
Sbjct: 283 NE 284
>gi|45433499 zinc finger, DHHC-type containing 18 [Homo sapiens]
Length = 388
Score = 89.7 bits (221), Expect = 3e-18
Identities = 46/121 (38%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
Query: 119 VRFCDRCHLIKPDRCHHCSVCAMCVLKMDHHCPWVNNCIGFSNYKFFLQF-LAYSVLYCL 177
+++C C + +P R HCSVC CV + DHHCPWV NC+G NY+FF F L+ S L
Sbjct: 191 LKYCFTCKMFRPPRTSHCSVCDNCVERFDHHCPWVGNCVGRRNYRFFYAFILSLSFLTAF 250
Query: 178 YIATTVFSYFIKYWRGELPSVRSKFHVLFLLFVACMFFV-SLVILFGYHCWLVSRNKTTL 236
A V ++ S + L V C F + S++ L G+H +LV+ N TT
Sbjct: 251 IFACVVTHLTLRAQGSNFLSTLKETPASVLELVICFFSIWSILGLSGFHTYLVASNLTTN 310
Query: 237 E 237
E
Sbjct: 311 E 311
>gi|56682974 zinc finger, DHHC domain containing 9 [Homo sapiens]
Length = 364
Score = 86.3 bits (212), Expect = 3e-17
Identities = 43/125 (34%), Positives = 68/125 (54%), Gaps = 10/125 (8%)
Query: 119 VRFCDRCHLIKPDRCHHCSVCAMCVLKMDHHCPWVNNCIGFSNYKFFLQFLAYSVLYCLY 178
+++C C + +P R HCS+C CV + DHHCPWV NC+G NY++F F+ L +Y
Sbjct: 138 LKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRNYRYFYLFILSLSLLTIY 197
Query: 179 IATTVFSYFIKYWR------GELPSVRSKFHVLFLLFVACMFFVSLVILFGYHCWLVSRN 232
VF++ I Y G L +++ + + + S+V L G+H +LV+ N
Sbjct: 198 ----VFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVVGLTGFHTFLVALN 253
Query: 233 KTTLE 237
+TT E
Sbjct: 254 QTTNE 258
>gi|56682972 zinc finger, DHHC domain containing 9 [Homo sapiens]
Length = 364
Score = 86.3 bits (212), Expect = 3e-17
Identities = 43/125 (34%), Positives = 68/125 (54%), Gaps = 10/125 (8%)
Query: 119 VRFCDRCHLIKPDRCHHCSVCAMCVLKMDHHCPWVNNCIGFSNYKFFLQFLAYSVLYCLY 178
+++C C + +P R HCS+C CV + DHHCPWV NC+G NY++F F+ L +Y
Sbjct: 138 LKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRNYRYFYLFILSLSLLTIY 197
Query: 179 IATTVFSYFIKYWR------GELPSVRSKFHVLFLLFVACMFFVSLVILFGYHCWLVSRN 232
VF++ I Y G L +++ + + + S+V L G+H +LV+ N
Sbjct: 198 ----VFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVVGLTGFHTFLVALN 253
Query: 233 KTTLE 237
+TT E
Sbjct: 254 QTTNE 258
>gi|30425538 zinc finger, DHHC-type containing 21 [Homo sapiens]
Length = 265
Score = 85.9 bits (211), Expect = 5e-17
Identities = 53/164 (32%), Positives = 82/164 (50%), Gaps = 17/164 (10%)
Query: 122 CDRCHLIKPDRCHHCSVCAMCVLKMDHHCPWVNNCIGFSNYKFFLQFLAYSVL---YCLY 178
C++C+L++P R HHCS C CV +MDHHCPW+NNC+G N+ FLQ Y+ L Y L
Sbjct: 92 CNKCNLMRPKRSHHCSRCGHCVRRMDHHCPWINNCVGEDNHWLFLQLCFYTELLTCYALM 151
Query: 179 IATTVFSYFIKYWRGELPSVRSKFHVLFLLFVACMFFVSLVILFG-YHCWLVS--RNKTT 235
+ + YF+ + L + + + A M LV + G ++ L+ + T+
Sbjct: 152 FSFCHYYYFLPLKKRNLDLFVFRHELAIMRLAAFMGITMLVGITGLFYTQLIGIITDTTS 211
Query: 236 LEAF---CTPVFTSGPEKNGFNLGFIKNIQQVFGDK-KKFWLIP 275
+E C + S P K + + +VFG + K W IP
Sbjct: 212 IEKMSNCCEDI--SRPRK-----PWQQTFSEVFGTRWKILWFIP 248
>gi|11968053 zinc finger, DHHC-type containing 6 [Homo sapiens]
Length = 413
Score = 80.5 bits (197), Expect = 2e-15
Identities = 46/144 (31%), Positives = 70/144 (48%), Gaps = 23/144 (15%)
Query: 119 VRFCDRCHLIKPDRCHHCSVCAMCVLKMDHHCPWVNNCIGFSNYKFFLQFLAYSVLYCLY 178
+++C C K R HHC C CV+KMDHHCPW+NNC G+ N+ F FL + L C++
Sbjct: 98 LQYCKVCQAYKAPRSHHCRKCNRCVMKMDHHCPWINNCCGYQNHASFTLFLLLAPLGCIH 157
Query: 179 IA--------TTVFSYFIKYW-----------RGELPSV----RSKFHVLFLLFVACMFF 215
A T ++ W R LP V + LF L +A
Sbjct: 158 AAFIFVMTMYTQLYHRLSFGWNTVKIDMSAARRDPLPIVPFGLAAFATTLFALGLALGTT 217
Query: 216 VSLVILFGYHCWLVSRNKTTLEAF 239
+++ +LF ++ RNKT++E++
Sbjct: 218 IAVGMLFFIQMKIILRNKTSIESW 241
>gi|103471993 huntingtin interacting protein 14 [Homo sapiens]
Length = 632
Score = 77.8 bits (190), Expect = 1e-14
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 14/164 (8%)
Query: 35 SYYAYVFELCLVIYLILYHAIFVFFTWTYW-----KSIFT-LPQQPNQKFHLSYTDKERY 88
S++ + L + + L +++ TW +W +F LP N L Y + +
Sbjct: 348 SFFDHSMHSALPLGIYLATKFWMYVTWFFWFWNDLNFLFIHLPFLANS-VALFYNFGKSW 406
Query: 89 ENEERPEVQKQMLVDMAKKLPVYTRTGSGAVR-FCDRCHLIKPDRCHHCSVCAMCVLKMD 147
+++ P + K K + TGS + FC C + KP R HC VC C+ K D
Sbjct: 407 KSD--PGIIKATEEQKKKTIVELAETGSLDLSIFCSTCLIRKPVRSKHCGVCNRCIAKFD 464
Query: 148 HHCPWVNNCIGFSNYKFFLQFLAYSVLYCLYIATTVFSYFIKYW 191
HHCPWV NC+G N+++F+ +L + L++ + I YW
Sbjct: 465 HHCPWVGNCVGAGNHRYFMGYL----FFLLFMICWMIYGCISYW 504
>gi|21361910 zinc finger, DHHC domain containing 12 [Homo sapiens]
Length = 267
Score = 77.8 bits (190), Expect = 1e-14
Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 9/152 (5%)
Query: 119 VRFCDRCHLIKPDRCHHCSVCAMCVLKMDHHCPWVNNCIGFSNYKFFLQFLAYS---VLY 175
+R C C +++P R HC C CV + DHHCPW+ NC+G N+ F+ +LA +L+
Sbjct: 96 LRRCRYCLVLQPLRARHCRECRRCVRRYDHHCPWMENCVGERNHPLFVVYLALQLVVLLW 155
Query: 176 CLYIATTVFSYFIKYWRGELPSVRSKFHVLFLLFVACMFFVSLVILFGYHCWLVSRNKTT 235
LY+A + +F + W L S F LL +F + +L H +LV+ N TT
Sbjct: 156 GLYLAWSGLRFF-QPWGLWLRSSGLLFATFLLL---SLFSLVASLLLVSHLYLVASNTTT 211
Query: 236 LEAFCTP--VFTSGPEKNGFNLGFIKNIQQVF 265
E + + N F+ G +N+ F
Sbjct: 212 WEFISSHRIAYLRQRPSNPFDRGLTRNLAHFF 243
>gi|88900493 zinc finger, DHHC domain containing 19 [Homo sapiens]
Length = 309
Score = 73.2 bits (178), Expect = 3e-13
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 2/131 (1%)
Query: 110 VYTRTGSGAVRFCDRCHLIKPDRCHHCSVCAMCVLKMDHHCPWVNNCIGFSNYKFFLQFL 169
V+ G+ +++C +C +P R +HC C +CV DHHC WVNNCIG N++FF+ +
Sbjct: 102 VWVNHGAFRLQWCPKCCFHRPPRTYHCPWCNICVEDFDHHCKWVNNCIGHRNFRFFMLLV 161
Query: 170 AYSVLYCLYIATTVFSYFIKYWRGELPSVRSKFHVLFLLFVACMFFVSLVILFGYHCWLV 229
LY + T + ++ LP K + + A V L +L V
Sbjct: 162 LSLCLYSGAMLVTCLIFLVR--TTHLPFSTDKAIAIVVAVSAAGLLVPLSLLLLIQALSV 219
Query: 230 SRNKTTLEAFC 240
S T + C
Sbjct: 220 SSADRTYKGKC 230
>gi|50234886 zinc finger, DHHC domain containing 23 [Homo sapiens]
Length = 409
Score = 71.2 bits (173), Expect = 1e-12
Identities = 25/58 (43%), Positives = 40/58 (68%)
Query: 121 FCDRCHLIKPDRCHHCSVCAMCVLKMDHHCPWVNNCIGFSNYKFFLQFLAYSVLYCLY 178
+C +C L++P R HC +C +CV +MDHHC W+N+C+G SN++ F+ L +L +Y
Sbjct: 260 WCAKCQLVRPARAWHCRICGICVRRMDHHCVWINSCVGESNHQAFILALLIFLLTSVY 317
>gi|47933348 zinc finger, DHHC domain containing 13 isoform 2 [Homo
sapiens]
Length = 492
Score = 70.9 bits (172), Expect = 2e-12
Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 20/180 (11%)
Query: 106 KKLPVYTRTGSGAV---RFCDRCHLIKPDRCHHCSVCAMCVLKMDHHCPWVNNCIGFSNY 162
KK+ + T +G++ FC C + KP R HC VC CV + D HC W CIGF N+
Sbjct: 279 KKVNIITLAETGSLDFRTFCTSCLIRKPLRSLHCHVCNCCVARYDQHCLWTGRCIGFGNH 338
Query: 163 KFFLQFLAYSVLYCLYIATTVFSYFIKY----------WRGELPSVRSKFHVLFLLFVAC 212
+++ FL + + C +I F Y + W V VL++L +A
Sbjct: 339 HYYIFFLFFLSMVCGWIIYGSFIYLSSHCATTFKEDGLWTYLNQIVACSPWVLYILMLAT 398
Query: 213 MFFVSLVILFGYHCW------LVSRNKTTLEAFCTPV-FTSGPEKNGFNLGFIKNIQQVF 265
F L + L S + +L+ + T K +NLGF++N+ F
Sbjct: 399 FHFSWSTFLLLNQLFQIAFLGLTSHERISLQKQSKHMKQTLSLRKTPYNLGFMQNLADFF 458
>gi|47933346 zinc finger, DHHC domain containing 13 isoform 1 [Homo
sapiens]
Length = 622
Score = 70.9 bits (172), Expect = 2e-12
Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 20/180 (11%)
Query: 106 KKLPVYTRTGSGAV---RFCDRCHLIKPDRCHHCSVCAMCVLKMDHHCPWVNNCIGFSNY 162
KK+ + T +G++ FC C + KP R HC VC CV + D HC W CIGF N+
Sbjct: 409 KKVNIITLAETGSLDFRTFCTSCLIRKPLRSLHCHVCNCCVARYDQHCLWTGRCIGFGNH 468
Query: 163 KFFLQFLAYSVLYCLYIATTVFSYFIKY----------WRGELPSVRSKFHVLFLLFVAC 212
+++ FL + + C +I F Y + W V VL++L +A
Sbjct: 469 HYYIFFLFFLSMVCGWIIYGSFIYLSSHCATTFKEDGLWTYLNQIVACSPWVLYILMLAT 528
Query: 213 MFFVSLVILFGYHCW------LVSRNKTTLEAFCTPV-FTSGPEKNGFNLGFIKNIQQVF 265
F L + L S + +L+ + T K +NLGF++N+ F
Sbjct: 529 FHFSWSTFLLLNQLFQIAFLGLTSHERISLQKQSKHMKQTLSLRKTPYNLGFMQNLADFF 588
>gi|197304690 zinc finger, DHHC-type containing 4 [Homo sapiens]
Length = 344
Score = 70.9 bits (172), Expect = 2e-12
Identities = 54/181 (29%), Positives = 80/181 (44%), Gaps = 37/181 (20%)
Query: 122 CDRCHLIKPDRCHHCSVCAMCVLKMDHHCPWVNNCIGFSNYKFFLQF---LAYSVLYCLY 178
C C L KP R HCSVC CV + DHHC WVNNCIG N ++FL + L S
Sbjct: 151 CSTCDLRKPARSKHCSVCNWCVHRFDHHCVWVNNCIGAWNIRYFLIYVLTLTASAATVAI 210
Query: 179 IATTVFSYFIKYW----------RGELPSVRSKFHV--LFLLFVACMFFVSLVILFG--- 223
++TT + + G L + + F + LFL F +F + V++
Sbjct: 211 VSTTFLVHLVVMSDLYQETYIDDLGHLHVMDTVFLIQYLFLTFPRIVFMLGFVVVLSFLL 270
Query: 224 -----YHCWLVSRNKTTLE------AFC--TPVFTSGP------EKNGFNLGFIKNIQQV 264
+ +L + N+TT E A+C P+ P +N + G N+Q++
Sbjct: 271 GGYLLFVLYLAATNQTTNEWYRGDWAWCQRCPLVAWPPSAEPQVHRNIHSHGLRSNLQEI 330
Query: 265 F 265
F
Sbjct: 331 F 331
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.328 0.141 0.477
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,141,896
Number of Sequences: 37866
Number of extensions: 593791
Number of successful extensions: 2475
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 2378
Number of HSP's gapped (non-prelim): 79
length of query: 328
length of database: 18,247,518
effective HSP length: 103
effective length of query: 225
effective length of database: 14,347,320
effective search space: 3228147000
effective search space used: 3228147000
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.