Guide to the Human Genome
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Search of human proteins with 218083269

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|218083269 chitinase domain containing 1 isoform c [Homo
sapiens]
         (362 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|218083269 chitinase domain containing 1 isoform c [Homo sapiens]   741   0.0  
gi|218083215 chitinase domain containing 1 isoform a [Homo sapiens]   725   0.0  
gi|218083182 chitinase domain containing 1 isoform a [Homo sapiens]   725   0.0  
gi|218083142 chitinase domain containing 1 isoform a [Homo sapiens]   725   0.0  
gi|218083233 chitinase domain containing 1 isoform b [Homo sapiens]   711   0.0  
gi|223555935 dynein, axonemal, heavy polypeptide 14 isoform 1 [H...    32   0.68 
gi|116008194 myosin light chain kinase isoform 3A [Homo sapiens]       31   2.0  
gi|116008192 myosin light chain kinase isoform 1 [Homo sapiens]        31   2.0  
gi|116008190 myosin light chain kinase isoform 3B [Homo sapiens]       31   2.0  
gi|116008188 myosin light chain kinase isoform 2 [Homo sapiens]        31   2.0  
gi|4502809 chitotriosidase [Homo sapiens]                              30   2.6  
gi|239745813 PREDICTED: hypothetical protein XP_002343595 [Homo ...    30   3.4  
gi|148612818 protein kinase, cGMP-dependent, type I isoform 1 [H...    30   4.4  
gi|10835242 protein kinase, cGMP-dependent, type I isoform 2 [Ho...    30   4.4  
gi|28557781 protein kinase C, eta [Homo sapiens]                       30   4.4  
gi|194018453 zinc finger protein 222 isoform 2 [Homo sapiens]          30   4.4  
gi|22748811 hypothetical protein LOC127795 [Homo sapiens]              30   4.4  
gi|63079709 apolipoprotein AV [Homo sapiens]                           28   9.8  
gi|91598777 transmembrane protein 146 [Homo sapiens]                   28   9.8  

>gi|218083269 chitinase domain containing 1 isoform c [Homo sapiens]
          Length = 362

 Score =  741 bits (1914), Expect = 0.0
 Identities = 362/362 (100%), Positives = 362/362 (100%)

Query: 1   MRTLFNLLWLALACSPVHTTLSKSDAKKAASKTLLEKSQFSDKPVQDRGLVVTDLKAESV 60
           MRTLFNLLWLALACSPVHTTLSKSDAKKAASKTLLEKSQFSDKPVQDRGLVVTDLKAESV
Sbjct: 1   MRTLFNLLWLALACSPVHTTLSKSDAKKAASKTLLEKSQFSDKPVQDRGLVVTDLKAESV 60

Query: 61  VLEHRSYCSAKARDRHFAGDVLGYVTPWNSHGYDVTKVFGSKFTQISPVWLQLKRRGREM 120
           VLEHRSYCSAKARDRHFAGDVLGYVTPWNSHGYDVTKVFGSKFTQISPVWLQLKRRGREM
Sbjct: 61  VLEHRSYCSAKARDRHFAGDVLGYVTPWNSHGYDVTKVFGSKFTQISPVWLQLKRRGREM 120

Query: 121 FEVTGLHDVDQGWMRAVRKHAKGLHIVPRLLFEDWTYDDFRNVLDSEDEIEELSKTVVQV 180
           FEVTGLHDVDQGWMRAVRKHAKGLHIVPRLLFEDWTYDDFRNVLDSEDEIEELSKTVVQV
Sbjct: 121 FEVTGLHDVDQGWMRAVRKHAKGLHIVPRLLFEDWTYDDFRNVLDSEDEIEELSKTVVQV 180

Query: 181 AKNQHFDGFVVEVWNQLLSQKRVTDQLGMFTHKEFEQLAPVLDGFSLMTYDYSTAHQPGP 240
           AKNQHFDGFVVEVWNQLLSQKRVTDQLGMFTHKEFEQLAPVLDGFSLMTYDYSTAHQPGP
Sbjct: 181 AKNQHFDGFVVEVWNQLLSQKRVTDQLGMFTHKEFEQLAPVLDGFSLMTYDYSTAHQPGP 240

Query: 241 NAPLSWVRACVQVLDPKSKWRSKILLGLNFYGMDYATSKDAREPVVGARYIQTLKDHRPR 300
           NAPLSWVRACVQVLDPKSKWRSKILLGLNFYGMDYATSKDAREPVVGARYIQTLKDHRPR
Sbjct: 241 NAPLSWVRACVQVLDPKSKWRSKILLGLNFYGMDYATSKDAREPVVGARYIQTLKDHRPR 300

Query: 301 MVWDSQASEHFFEYKKSRSGRHVVFYPTLKSLQVRLELARELGVGVSIWELGQGLDYFYD 360
           MVWDSQASEHFFEYKKSRSGRHVVFYPTLKSLQVRLELARELGVGVSIWELGQGLDYFYD
Sbjct: 301 MVWDSQASEHFFEYKKSRSGRHVVFYPTLKSLQVRLELARELGVGVSIWELGQGLDYFYD 360

Query: 361 LL 362
           LL
Sbjct: 361 LL 362


>gi|218083215 chitinase domain containing 1 isoform a [Homo sapiens]
          Length = 393

 Score =  725 bits (1872), Expect = 0.0
 Identities = 362/393 (92%), Positives = 362/393 (92%), Gaps = 31/393 (7%)

Query: 1   MRTLFNLLWLALACSPVHTTLSKSDAKKAASKTLLEKSQFSDKPVQDRGLVVTDLKAESV 60
           MRTLFNLLWLALACSPVHTTLSKSDAKKAASKTLLEKSQFSDKPVQDRGLVVTDLKAESV
Sbjct: 1   MRTLFNLLWLALACSPVHTTLSKSDAKKAASKTLLEKSQFSDKPVQDRGLVVTDLKAESV 60

Query: 61  VLEHRSYCSAKARDRHFAGDVLGYVTPWNSHGYDVTKVFGSKFTQISPVWLQLKRRGREM 120
           VLEHRSYCSAKARDRHFAGDVLGYVTPWNSHGYDVTKVFGSKFTQISPVWLQLKRRGREM
Sbjct: 61  VLEHRSYCSAKARDRHFAGDVLGYVTPWNSHGYDVTKVFGSKFTQISPVWLQLKRRGREM 120

Query: 121 FEVTGLHDVDQGWMRAVRKHAKGLHIVPRLLFEDWTYDDFRNVLDSEDEIEELSKTVVQV 180
           FEVTGLHDVDQGWMRAVRKHAKGLHIVPRLLFEDWTYDDFRNVLDSEDEIEELSKTVVQV
Sbjct: 121 FEVTGLHDVDQGWMRAVRKHAKGLHIVPRLLFEDWTYDDFRNVLDSEDEIEELSKTVVQV 180

Query: 181 AKNQHFDGFVVEVWNQLLSQKRV-------------------------------TDQLGM 209
           AKNQHFDGFVVEVWNQLLSQKRV                               TDQLGM
Sbjct: 181 AKNQHFDGFVVEVWNQLLSQKRVGLIHMLTHLAEALHQARLLALLVIPPAITPGTDQLGM 240

Query: 210 FTHKEFEQLAPVLDGFSLMTYDYSTAHQPGPNAPLSWVRACVQVLDPKSKWRSKILLGLN 269
           FTHKEFEQLAPVLDGFSLMTYDYSTAHQPGPNAPLSWVRACVQVLDPKSKWRSKILLGLN
Sbjct: 241 FTHKEFEQLAPVLDGFSLMTYDYSTAHQPGPNAPLSWVRACVQVLDPKSKWRSKILLGLN 300

Query: 270 FYGMDYATSKDAREPVVGARYIQTLKDHRPRMVWDSQASEHFFEYKKSRSGRHVVFYPTL 329
           FYGMDYATSKDAREPVVGARYIQTLKDHRPRMVWDSQASEHFFEYKKSRSGRHVVFYPTL
Sbjct: 301 FYGMDYATSKDAREPVVGARYIQTLKDHRPRMVWDSQASEHFFEYKKSRSGRHVVFYPTL 360

Query: 330 KSLQVRLELARELGVGVSIWELGQGLDYFYDLL 362
           KSLQVRLELARELGVGVSIWELGQGLDYFYDLL
Sbjct: 361 KSLQVRLELARELGVGVSIWELGQGLDYFYDLL 393


>gi|218083182 chitinase domain containing 1 isoform a [Homo sapiens]
          Length = 393

 Score =  725 bits (1872), Expect = 0.0
 Identities = 362/393 (92%), Positives = 362/393 (92%), Gaps = 31/393 (7%)

Query: 1   MRTLFNLLWLALACSPVHTTLSKSDAKKAASKTLLEKSQFSDKPVQDRGLVVTDLKAESV 60
           MRTLFNLLWLALACSPVHTTLSKSDAKKAASKTLLEKSQFSDKPVQDRGLVVTDLKAESV
Sbjct: 1   MRTLFNLLWLALACSPVHTTLSKSDAKKAASKTLLEKSQFSDKPVQDRGLVVTDLKAESV 60

Query: 61  VLEHRSYCSAKARDRHFAGDVLGYVTPWNSHGYDVTKVFGSKFTQISPVWLQLKRRGREM 120
           VLEHRSYCSAKARDRHFAGDVLGYVTPWNSHGYDVTKVFGSKFTQISPVWLQLKRRGREM
Sbjct: 61  VLEHRSYCSAKARDRHFAGDVLGYVTPWNSHGYDVTKVFGSKFTQISPVWLQLKRRGREM 120

Query: 121 FEVTGLHDVDQGWMRAVRKHAKGLHIVPRLLFEDWTYDDFRNVLDSEDEIEELSKTVVQV 180
           FEVTGLHDVDQGWMRAVRKHAKGLHIVPRLLFEDWTYDDFRNVLDSEDEIEELSKTVVQV
Sbjct: 121 FEVTGLHDVDQGWMRAVRKHAKGLHIVPRLLFEDWTYDDFRNVLDSEDEIEELSKTVVQV 180

Query: 181 AKNQHFDGFVVEVWNQLLSQKRV-------------------------------TDQLGM 209
           AKNQHFDGFVVEVWNQLLSQKRV                               TDQLGM
Sbjct: 181 AKNQHFDGFVVEVWNQLLSQKRVGLIHMLTHLAEALHQARLLALLVIPPAITPGTDQLGM 240

Query: 210 FTHKEFEQLAPVLDGFSLMTYDYSTAHQPGPNAPLSWVRACVQVLDPKSKWRSKILLGLN 269
           FTHKEFEQLAPVLDGFSLMTYDYSTAHQPGPNAPLSWVRACVQVLDPKSKWRSKILLGLN
Sbjct: 241 FTHKEFEQLAPVLDGFSLMTYDYSTAHQPGPNAPLSWVRACVQVLDPKSKWRSKILLGLN 300

Query: 270 FYGMDYATSKDAREPVVGARYIQTLKDHRPRMVWDSQASEHFFEYKKSRSGRHVVFYPTL 329
           FYGMDYATSKDAREPVVGARYIQTLKDHRPRMVWDSQASEHFFEYKKSRSGRHVVFYPTL
Sbjct: 301 FYGMDYATSKDAREPVVGARYIQTLKDHRPRMVWDSQASEHFFEYKKSRSGRHVVFYPTL 360

Query: 330 KSLQVRLELARELGVGVSIWELGQGLDYFYDLL 362
           KSLQVRLELARELGVGVSIWELGQGLDYFYDLL
Sbjct: 361 KSLQVRLELARELGVGVSIWELGQGLDYFYDLL 393


>gi|218083142 chitinase domain containing 1 isoform a [Homo sapiens]
          Length = 393

 Score =  725 bits (1872), Expect = 0.0
 Identities = 362/393 (92%), Positives = 362/393 (92%), Gaps = 31/393 (7%)

Query: 1   MRTLFNLLWLALACSPVHTTLSKSDAKKAASKTLLEKSQFSDKPVQDRGLVVTDLKAESV 60
           MRTLFNLLWLALACSPVHTTLSKSDAKKAASKTLLEKSQFSDKPVQDRGLVVTDLKAESV
Sbjct: 1   MRTLFNLLWLALACSPVHTTLSKSDAKKAASKTLLEKSQFSDKPVQDRGLVVTDLKAESV 60

Query: 61  VLEHRSYCSAKARDRHFAGDVLGYVTPWNSHGYDVTKVFGSKFTQISPVWLQLKRRGREM 120
           VLEHRSYCSAKARDRHFAGDVLGYVTPWNSHGYDVTKVFGSKFTQISPVWLQLKRRGREM
Sbjct: 61  VLEHRSYCSAKARDRHFAGDVLGYVTPWNSHGYDVTKVFGSKFTQISPVWLQLKRRGREM 120

Query: 121 FEVTGLHDVDQGWMRAVRKHAKGLHIVPRLLFEDWTYDDFRNVLDSEDEIEELSKTVVQV 180
           FEVTGLHDVDQGWMRAVRKHAKGLHIVPRLLFEDWTYDDFRNVLDSEDEIEELSKTVVQV
Sbjct: 121 FEVTGLHDVDQGWMRAVRKHAKGLHIVPRLLFEDWTYDDFRNVLDSEDEIEELSKTVVQV 180

Query: 181 AKNQHFDGFVVEVWNQLLSQKRV-------------------------------TDQLGM 209
           AKNQHFDGFVVEVWNQLLSQKRV                               TDQLGM
Sbjct: 181 AKNQHFDGFVVEVWNQLLSQKRVGLIHMLTHLAEALHQARLLALLVIPPAITPGTDQLGM 240

Query: 210 FTHKEFEQLAPVLDGFSLMTYDYSTAHQPGPNAPLSWVRACVQVLDPKSKWRSKILLGLN 269
           FTHKEFEQLAPVLDGFSLMTYDYSTAHQPGPNAPLSWVRACVQVLDPKSKWRSKILLGLN
Sbjct: 241 FTHKEFEQLAPVLDGFSLMTYDYSTAHQPGPNAPLSWVRACVQVLDPKSKWRSKILLGLN 300

Query: 270 FYGMDYATSKDAREPVVGARYIQTLKDHRPRMVWDSQASEHFFEYKKSRSGRHVVFYPTL 329
           FYGMDYATSKDAREPVVGARYIQTLKDHRPRMVWDSQASEHFFEYKKSRSGRHVVFYPTL
Sbjct: 301 FYGMDYATSKDAREPVVGARYIQTLKDHRPRMVWDSQASEHFFEYKKSRSGRHVVFYPTL 360

Query: 330 KSLQVRLELARELGVGVSIWELGQGLDYFYDLL 362
           KSLQVRLELARELGVGVSIWELGQGLDYFYDLL
Sbjct: 361 KSLQVRLELARELGVGVSIWELGQGLDYFYDLL 393


>gi|218083233 chitinase domain containing 1 isoform b [Homo sapiens]
          Length = 418

 Score =  711 bits (1836), Expect = 0.0
 Identities = 362/418 (86%), Positives = 362/418 (86%), Gaps = 56/418 (13%)

Query: 1   MRTLFNLLWLALACSPVHTTLSKSDAKKAASKTLLEK----------------------- 37
           MRTLFNLLWLALACSPVHTTLSKSDAKKAASKTLLEK                       
Sbjct: 1   MRTLFNLLWLALACSPVHTTLSKSDAKKAASKTLLEKVKFCSCCPGWSAMARSWLTATSA 60

Query: 38  --SQFSDKPVQDRGLVVTDLKAESVVLEHRSYCSAKARDRHFAGDVLGYVTPWNSHGYDV 95
             SQFSDKPVQDRGLVVTDLKAESVVLEHRSYCSAKARDRHFAGDVLGYVTPWNSHGYDV
Sbjct: 61  TQSQFSDKPVQDRGLVVTDLKAESVVLEHRSYCSAKARDRHFAGDVLGYVTPWNSHGYDV 120

Query: 96  TKVFGSKFTQISPVWLQLKRRGREMFEVTGLHDVDQGWMRAVRKHAKGLHIVPRLLFEDW 155
           TKVFGSKFTQISPVWLQLKRRGREMFEVTGLHDVDQGWMRAVRKHAKGLHIVPRLLFEDW
Sbjct: 121 TKVFGSKFTQISPVWLQLKRRGREMFEVTGLHDVDQGWMRAVRKHAKGLHIVPRLLFEDW 180

Query: 156 TYDDFRNVLDSEDEIEELSKTVVQVAKNQHFDGFVVEVWNQLLSQKRV------------ 203
           TYDDFRNVLDSEDEIEELSKTVVQVAKNQHFDGFVVEVWNQLLSQKRV            
Sbjct: 181 TYDDFRNVLDSEDEIEELSKTVVQVAKNQHFDGFVVEVWNQLLSQKRVGLIHMLTHLAEA 240

Query: 204 -------------------TDQLGMFTHKEFEQLAPVLDGFSLMTYDYSTAHQPGPNAPL 244
                              TDQLGMFTHKEFEQLAPVLDGFSLMTYDYSTAHQPGPNAPL
Sbjct: 241 LHQARLLALLVIPPAITPGTDQLGMFTHKEFEQLAPVLDGFSLMTYDYSTAHQPGPNAPL 300

Query: 245 SWVRACVQVLDPKSKWRSKILLGLNFYGMDYATSKDAREPVVGARYIQTLKDHRPRMVWD 304
           SWVRACVQVLDPKSKWRSKILLGLNFYGMDYATSKDAREPVVGARYIQTLKDHRPRMVWD
Sbjct: 301 SWVRACVQVLDPKSKWRSKILLGLNFYGMDYATSKDAREPVVGARYIQTLKDHRPRMVWD 360

Query: 305 SQASEHFFEYKKSRSGRHVVFYPTLKSLQVRLELARELGVGVSIWELGQGLDYFYDLL 362
           SQASEHFFEYKKSRSGRHVVFYPTLKSLQVRLELARELGVGVSIWELGQGLDYFYDLL
Sbjct: 361 SQASEHFFEYKKSRSGRHVVFYPTLKSLQVRLELARELGVGVSIWELGQGLDYFYDLL 418


>gi|223555935 dynein, axonemal, heavy polypeptide 14 isoform 1 [Homo
            sapiens]
          Length = 4515

 Score = 32.3 bits (72), Expect = 0.68
 Identities = 33/151 (21%), Positives = 54/151 (35%), Gaps = 13/151 (8%)

Query: 205  DQLGMFTHKEFEQLAPVLDGFSLMTYDYSTAHQPGPN--APLSWVRACVQVLDPKSKWRS 262
            D+L    HK  + L   + G  ++T +         N   P  W +   +   P S W  
Sbjct: 4213 DKLLFVIHKSLKDLQLAIKGEIILTQELEEIFNSFLNMRVPTLWQKHAYRSCKPLSSWID 4272

Query: 263  KILLGLNFYGMDYATSKDAREPVVGARYIQTLKDHRPRMVWDSQASEH-------FFEYK 315
             ++  LNF+     T        +  RY++ +   +  +   SQ  +H       FFE  
Sbjct: 4273 DLIQRLNFFN----TWAKVAYTAIQRRYMRFVTVWKQSIPSTSQKCKHPEDSENNFFEGF 4328

Query: 316  KSRSGRHVVFYPTLKSLQVRLELARELGVGV 346
             SR      F+P      V  +  R  G+ V
Sbjct: 4329 PSRYWLPAFFFPQAFLAAVLQDYGRSRGIAV 4359


>gi|116008194 myosin light chain kinase isoform 3A [Homo sapiens]
          Length = 1863

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 13/108 (12%)

Query: 28  KAASKTLLEKSQFSDKPVQDRGLVVTDLKAESVVLEHRSYCSAKARDRHFAGDVLGYVTP 87
           K  + + + K+  S  P +   + +T+  A + +L  R+ C  +     F G V GY  P
Sbjct: 5   KLVASSHISKTSLSVDPSRVDSMPLTE--APAFILPPRNLCIKEGATAKFEGRVRGYPEP 62

Query: 88  ---WNSHGYDVTKVFGSKFTQISPVWLQLKRRGREMFEVTGLHDVDQG 132
              W+ +G  +T   G +F       L    RG     +  +H+ D+G
Sbjct: 63  QVTWHRNGQPITS--GGRFL------LDCGIRGTFSLVIHAVHEEDRG 102


>gi|116008192 myosin light chain kinase isoform 1 [Homo sapiens]
          Length = 1914

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 13/108 (12%)

Query: 28  KAASKTLLEKSQFSDKPVQDRGLVVTDLKAESVVLEHRSYCSAKARDRHFAGDVLGYVTP 87
           K  + + + K+  S  P +   + +T+  A + +L  R+ C  +     F G V GY  P
Sbjct: 5   KLVASSHISKTSLSVDPSRVDSMPLTE--APAFILPPRNLCIKEGATAKFEGRVRGYPEP 62

Query: 88  ---WNSHGYDVTKVFGSKFTQISPVWLQLKRRGREMFEVTGLHDVDQG 132
              W+ +G  +T   G +F       L    RG     +  +H+ D+G
Sbjct: 63  QVTWHRNGQPITS--GGRFL------LDCGIRGTFSLVIHAVHEEDRG 102


>gi|116008190 myosin light chain kinase isoform 3B [Homo sapiens]
          Length = 1794

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 13/108 (12%)

Query: 28  KAASKTLLEKSQFSDKPVQDRGLVVTDLKAESVVLEHRSYCSAKARDRHFAGDVLGYVTP 87
           K  + + + K+  S  P +   + +T+  A + +L  R+ C  +     F G V GY  P
Sbjct: 5   KLVASSHISKTSLSVDPSRVDSMPLTE--APAFILPPRNLCIKEGATAKFEGRVRGYPEP 62

Query: 88  ---WNSHGYDVTKVFGSKFTQISPVWLQLKRRGREMFEVTGLHDVDQG 132
              W+ +G  +T   G +F       L    RG     +  +H+ D+G
Sbjct: 63  QVTWHRNGQPITS--GGRFL------LDCGIRGTFSLVIHAVHEEDRG 102


>gi|116008188 myosin light chain kinase isoform 2 [Homo sapiens]
          Length = 1845

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 13/108 (12%)

Query: 28  KAASKTLLEKSQFSDKPVQDRGLVVTDLKAESVVLEHRSYCSAKARDRHFAGDVLGYVTP 87
           K  + + + K+  S  P +   + +T+  A + +L  R+ C  +     F G V GY  P
Sbjct: 5   KLVASSHISKTSLSVDPSRVDSMPLTE--APAFILPPRNLCIKEGATAKFEGRVRGYPEP 62

Query: 88  ---WNSHGYDVTKVFGSKFTQISPVWLQLKRRGREMFEVTGLHDVDQG 132
              W+ +G  +T   G +F       L    RG     +  +H+ D+G
Sbjct: 63  QVTWHRNGQPITS--GGRFL------LDCGIRGTFSLVIHAVHEEDRG 102


>gi|4502809 chitotriosidase [Homo sapiens]
          Length = 466

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 16/85 (18%)

Query: 214 EFEQLAPVLDGFSLMTYDYSTAHQP--GPNAPLSW------------VRACVQVLDPKSK 259
           E +++A  LD  +LM YD+  + +   G N+PL              V A VQ    K  
Sbjct: 196 EVDKIAQNLDFVNLMAYDFHGSWEKVTGHNSPLYKRQEESGAAASLNVDAAVQQWLQKGT 255

Query: 260 WRSKILLGLNFYGMDY--ATSKDAR 282
             SK++LG+  YG  +  A+S D R
Sbjct: 256 PASKLILGMPTYGRSFTLASSSDTR 280


>gi|239745813 PREDICTED: hypothetical protein XP_002343595 [Homo
           sapiens]
          Length = 279

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 5/70 (7%)

Query: 204 TDQLGMFTHKEFEQLA----PVLDGFS-LMTYDYSTAHQPGPNAPLSWVRACVQVLDPKS 258
           TD+LG+    +  Q+A    P+  G + L   D+ T H P  + PLSW +     + P+ 
Sbjct: 12  TDRLGILQWVDEAQMAASPLPMYPGPTPLPGDDHETQHPPSSSRPLSWPQKAQHPMGPEE 71

Query: 259 KWRSKILLGL 268
               + L+GL
Sbjct: 72  SGVLEPLVGL 81


>gi|148612818 protein kinase, cGMP-dependent, type I isoform 1 [Homo
           sapiens]
          Length = 671

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 2/34 (5%)

Query: 45  VQDRGLVVTDLKAESVVLEHRSYCSAKARDRHFA 78
           +  +G++  DLK E+++L+HR Y  AK  D  FA
Sbjct: 475 LHSKGIIYRDLKPENLILDHRGY--AKLVDFGFA 506


>gi|10835242 protein kinase, cGMP-dependent, type I isoform 2 [Homo
           sapiens]
          Length = 686

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 2/34 (5%)

Query: 45  VQDRGLVVTDLKAESVVLEHRSYCSAKARDRHFA 78
           +  +G++  DLK E+++L+HR Y  AK  D  FA
Sbjct: 490 LHSKGIIYRDLKPENLILDHRGY--AKLVDFGFA 521


>gi|28557781 protein kinase C, eta [Homo sapiens]
          Length = 683

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 9/24 (37%), Positives = 18/24 (75%)

Query: 45  VQDRGLVVTDLKAESVVLEHRSYC 68
           + D+G++  DLK ++V+L+H  +C
Sbjct: 470 LHDKGIIYRDLKLDNVLLDHEGHC 493


>gi|194018453 zinc finger protein 222 isoform 2 [Homo sapiens]
          Length = 451

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 2/69 (2%)

Query: 149 RLLFEDWTYDDFRNVLDSEDEIEELSKTVVQVAKNQHFDGFVVEVWNQLLSQKRVTDQLG 208
           R L+ D   ++FRN+L    +I+   +TV +   ++ F     ++W Q+ S    +    
Sbjct: 30  RKLYRDVMLENFRNLLSVGGKIQTEMETVPEAGTHEEFS--CKQIWEQIASDLTRSQDTT 87

Query: 209 MFTHKEFEQ 217
           +   + FEQ
Sbjct: 88  ISNSQLFEQ 96


>gi|22748811 hypothetical protein LOC127795 [Homo sapiens]
          Length = 546

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 5/86 (5%)

Query: 144 LHIVPRLLFEDWTYDDFRNVLDSEDEIEELSKTVVQVAKNQHFDGFVVEVWNQLLSQKRV 203
           +H +PR    DW+ +    V  S D+ E++ ++          D F++ +  + L  + +
Sbjct: 136 VHGIPRRKLRDWSLEQM--VRGSSDQPEDIGQSPSGTTNE---DAFLLALVRRELKSRPL 190

Query: 204 TDQLGMFTHKEFEQLAPVLDGFSLMT 229
           +  L     KE + L P+  GF L +
Sbjct: 191 SSNLLEKLQKELKILDPISSGFLLQS 216


>gi|63079709 apolipoprotein AV [Homo sapiens]
          Length = 366

 Score = 28.5 bits (62), Expect = 9.8
 Identities = 30/118 (25%), Positives = 44/118 (37%), Gaps = 2/118 (1%)

Query: 149 RLLFEDWTYDDFRNVLDSEDEIEELSKTVVQVAKNQHFDGFVVEVWNQLLS-QKRVTDQL 207
           R   + +T D    V     E++E  + V +  K Q   G V E W  L   Q RV    
Sbjct: 126 RQQLKPYTMDLMEQVALRVQELQEQLRVVGEDTKAQLLGG-VDEAWALLQGLQSRVVHHT 184

Query: 208 GMFTHKEFEQLAPVLDGFSLMTYDYSTAHQPGPNAPLSWVRACVQVLDPKSKWRSKIL 265
           G F          ++ G      +   +  P   A  + +  CVQVL  K   ++K L
Sbjct: 185 GRFKELFHPYAESLVSGIGRHVQELHRSVAPHAPASPARLSRCVQVLSRKLTLKAKAL 242


>gi|91598777 transmembrane protein 146 [Homo sapiens]
          Length = 798

 Score = 28.5 bits (62), Expect = 9.8
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)

Query: 231 DYSTAHQPGPNAPLSWVRACVQVLDPKSKWRSKILLGLNFYGMDYATSKD 280
           +Y + H P  NAPL W     Q+L  ++   ++I+ G N + + Y +  D
Sbjct: 648 NYVSCHDPNNNAPLRWPDVQYQILGGRT--ANQIIFGHNGFYVFYISIVD 695


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.135    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,387,843
Number of Sequences: 37866
Number of extensions: 554047
Number of successful extensions: 1182
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1168
Number of HSP's gapped (non-prelim): 24
length of query: 362
length of database: 18,247,518
effective HSP length: 104
effective length of query: 258
effective length of database: 14,309,454
effective search space: 3691839132
effective search space used: 3691839132
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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