Search of human proteins with 217035113

Search of human proteins with 217035113

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|217035113 organic solute transporter alpha [Homo sapiens]
         (340 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|217035113 organic solute transporter alpha [Homo sapiens]          684   0.0  
gi|190358512 transmembrane protein 184C [Homo sapiens]                 44   3e-04
gi|167466217 integrin alpha L isoform b precursor [Homo sapiens]       30   2.4  
gi|167466215 integrin alpha L isoform a precursor [Homo sapiens]       30   2.4  
gi|119964728 D-2-hydroxyglutarate dehydrogenase precursor [Homo ...    30   2.4  
gi|169204828 PREDICTED: hypothetical protein [Homo sapiens]            29   6.9  
gi|169205567 PREDICTED: hypothetical protein [Homo sapiens]            29   6.9  
gi|169204182 PREDICTED: hypothetical protein [Homo sapiens]            29   6.9  
gi|31543630 solute carrier family 20 (phosphate transporter), me...    28   9.0  

>gi|217035113 organic solute transporter alpha [Homo sapiens]
          Length = 340

 Score =  684 bits (1764), Expect = 0.0
 Identities = 340/340 (100%), Positives = 340/340 (100%)

Query: 1   MEPGRTQIKLDPRYTADLLEVLKTNYGIPSACFSQPPTAAQLLRALGPVELALTSILTLL 60
           MEPGRTQIKLDPRYTADLLEVLKTNYGIPSACFSQPPTAAQLLRALGPVELALTSILTLL
Sbjct: 1   MEPGRTQIKLDPRYTADLLEVLKTNYGIPSACFSQPPTAAQLLRALGPVELALTSILTLL 60

Query: 61  ALGSIAIFLEDAVYLYKNTLCPIKRRTLLWKSSAPTVVSVLCCFGLWIPRSLVLVEMTIT 120
           ALGSIAIFLEDAVYLYKNTLCPIKRRTLLWKSSAPTVVSVLCCFGLWIPRSLVLVEMTIT
Sbjct: 61  ALGSIAIFLEDAVYLYKNTLCPIKRRTLLWKSSAPTVVSVLCCFGLWIPRSLVLVEMTIT 120

Query: 121 SFYAVCFYLLMLVMVEGFGGKEAVLRTLRDTPMMVHTGPCCCCCPCCPRLLLTRKKLQLL 180
           SFYAVCFYLLMLVMVEGFGGKEAVLRTLRDTPMMVHTGPCCCCCPCCPRLLLTRKKLQLL
Sbjct: 121 SFYAVCFYLLMLVMVEGFGGKEAVLRTLRDTPMMVHTGPCCCCCPCCPRLLLTRKKLQLL 180

Query: 181 MLGPFQYAFLKITLTLVGLFLVPDGIYDPADISEGSTALWINTFLGVSTLLALWTLGIIS 240
           MLGPFQYAFLKITLTLVGLFLVPDGIYDPADISEGSTALWINTFLGVSTLLALWTLGIIS
Sbjct: 181 MLGPFQYAFLKITLTLVGLFLVPDGIYDPADISEGSTALWINTFLGVSTLLALWTLGIIS 240

Query: 241 RQARLHLGEQNMGAKFALFQVLLILTALQPSIFSVLANGGQIACSPPYSSKTRSQVMNCH 300
           RQARLHLGEQNMGAKFALFQVLLILTALQPSIFSVLANGGQIACSPPYSSKTRSQVMNCH
Sbjct: 241 RQARLHLGEQNMGAKFALFQVLLILTALQPSIFSVLANGGQIACSPPYSSKTRSQVMNCH 300

Query: 301 LLILETFLMTVLTRMYYRRKDHKVGYETFSSPDLDLNLKA 340
           LLILETFLMTVLTRMYYRRKDHKVGYETFSSPDLDLNLKA
Sbjct: 301 LLILETFLMTVLTRMYYRRKDHKVGYETFSSPDLDLNLKA 340


>gi|190358512 transmembrane protein 184C [Homo sapiens]
          Length = 438

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 38/160 (23%), Positives = 69/160 (43%), Gaps = 9/160 (5%)

Query: 156 HTGPCCCCCP-CCPRLLLTRKKLQLLMLGPFQYAFLKITLTLVGLFLVPDGIYDPADISE 214
           H  P CCC P     +LL R KL     G  QY  ++   T+V L     GIYD  + S 
Sbjct: 152 HFPPLCCCPPWAMGEVLLFRCKL-----GVLQYTVVRPFTTIVALICELLGIYDEGNFSF 206

Query: 215 GSTALWINTFLGVSTLLALWTLGIISRQARLHLGEQNMGAKFALFQVLLILTALQPSIFS 274
            +   ++     +S L A++ L +  +  +  L       KF   ++++ ++  Q  + +
Sbjct: 207 SNAWTYLVIINNMSQLFAMYCLLLFYKVLKEELSPIQPVGKFLCVKLVVFVSFWQAVVIA 266

Query: 275 VLANGGQIACSPPYSSKTRSQV---MNCHLLILETFLMTV 311
           +L   G I+    +  +T   V   +   ++ +E FL  +
Sbjct: 267 LLVKVGVISEKHTWEWQTVEAVATGLQDFIICIEMFLAAI 306


>gi|167466217 integrin alpha L isoform b precursor [Homo sapiens]
          Length = 1086

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 6/89 (6%)

Query: 19  LEVLKTNYGIPSACFSQPPTAAQLLRALG-----PVELALTSILTLLALGSIA-IFLEDA 72
           +E+LK +  IP +C   P  +  L RAL      P+  A  S+   +   ++      D+
Sbjct: 748 VEMLKPHSQIPVSCEELPEESRLLSRALSCNVSSPIFKAGHSVALQMMFNTLVNSSWGDS 807

Query: 73  VYLYKNTLCPIKRRTLLWKSSAPTVVSVL 101
           V L+ N  C  +   LL  +SA T++ +L
Sbjct: 808 VELHANVTCNNEDSDLLEDNSATTIIPIL 836


>gi|167466215 integrin alpha L isoform a precursor [Homo sapiens]
          Length = 1170

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 6/89 (6%)

Query: 19  LEVLKTNYGIPSACFSQPPTAAQLLRALG-----PVELALTSILTLLALGSIA-IFLEDA 72
           +E+LK +  IP +C   P  +  L RAL      P+  A  S+   +   ++      D+
Sbjct: 832 VEMLKPHSQIPVSCEELPEESRLLSRALSCNVSSPIFKAGHSVALQMMFNTLVNSSWGDS 891

Query: 73  VYLYKNTLCPIKRRTLLWKSSAPTVVSVL 101
           V L+ N  C  +   LL  +SA T++ +L
Sbjct: 892 VELHANVTCNNEDSDLLEDNSATTIIPIL 920


>gi|119964728 D-2-hydroxyglutarate dehydrogenase precursor [Homo
           sapiens]
          Length = 521

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 32/139 (23%), Positives = 54/139 (38%), Gaps = 21/139 (15%)

Query: 161 CCCCPCCPRLLLTRKKLQLLMLGPFQYAFLKITLTLVGLF--LVPDGIYDPADISEGSTA 218
           CC  P  P + LTR++  +  L      F  ++   +  F  +VP G+    +  +    
Sbjct: 36  CCSAPGTPEVPLTRERYPVRRL-----PFSTVSKQDLAAFERIVPGGVVTDPEALQAPNV 90

Query: 219 LWINTFLGVS-TLLALWTLGIISRQARLHLGEQNM------------GAKFALFQVLLIL 265
            W+ T  G S  LL   T   +S   R H  E+N+            G    +F  +++ 
Sbjct: 91  DWLRTLRGCSKVLLRPRTSEEVSHILR-HCHERNLAVNPQGGNTGMVGGSVPVFDEIILS 149

Query: 266 TALQPSIFSVLANGGQIAC 284
           TA    + S  +  G + C
Sbjct: 150 TARMNRVLSFHSVSGILVC 168


>gi|169204828 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 219

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 8/10 (80%), Positives = 8/10 (80%)

Query: 158 GPCCCCCPCC 167
           G CCCCC CC
Sbjct: 154 GCCCCCCCCC 163


>gi|169205567 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 219

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 8/10 (80%), Positives = 8/10 (80%)

Query: 158 GPCCCCCPCC 167
           G CCCCC CC
Sbjct: 154 GCCCCCCCCC 163


>gi|169204182 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 220

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 8/10 (80%), Positives = 8/10 (80%)

Query: 158 GPCCCCCPCC 167
           G CCCCC CC
Sbjct: 154 GCCCCCCCCC 163


>gi|31543630 solute carrier family 20 (phosphate transporter),
           member 1 [Homo sapiens]
          Length = 679

 Score = 28.5 bits (62), Expect = 9.0
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 5/43 (11%)

Query: 196 LVGLFLVPDGIYDPADISEG-STALWINTFLGVSTLLALWTLG 237
           LV L+LV    YD  D+S   +T +W+  + GV   + LW  G
Sbjct: 542 LVALYLV----YDTGDVSSKVATPIWLLLYGGVGICVGLWVWG 580


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.327    0.141    0.438 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,211,191
Number of Sequences: 37866
Number of extensions: 481607
Number of successful extensions: 2089
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2038
Number of HSP's gapped (non-prelim): 43
length of query: 340
length of database: 18,247,518
effective HSP length: 103
effective length of query: 237
effective length of database: 14,347,320
effective search space: 3400314840
effective search space used: 3400314840
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.