Search of human proteins with 21362110

Search of human proteins with 21362110

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|21362110 thiamin pyrophosphokinase 1 isoform a [Homo
sapiens]
         (243 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|21362110 thiamin pyrophosphokinase 1 isoform a [Homo sapiens]      503   e-143
gi|110227857 thiamin pyrophosphokinase 1 isoform b [Homo sapiens]     387   e-108
gi|5454002 putative c-Myc-responsive isoform 1 [Homo sapiens]          29   3.2  
gi|56713254 kynurenine aminotransferase III isoform 1 [Homo sapi...    29   4.2  
gi|56713256 kynurenine aminotransferase III isoform 2 [Homo sapi...    29   4.2  
gi|7657619 sushi-repeat-containing protein, X-linked 2 [Homo sap...    28   7.2  
gi|224586853 sorbin and SH3 domain containing 2 isoform 7 [Homo ...    28   9.4  
gi|10947118 sorbin and SH3 domain containing 2 isoform 2 [Homo s...    28   9.4  

>gi|21362110 thiamin pyrophosphokinase 1 isoform a [Homo sapiens]
          Length = 243

 Score =  503 bits (1295), Expect = e-143
 Identities = 243/243 (100%), Positives = 243/243 (100%)

Query: 1   MEHAFTPLEPLLSTGNLKYCLVILNQPLDNYFRHLWNKALLRACADGGANRLYDITEGER 60
           MEHAFTPLEPLLSTGNLKYCLVILNQPLDNYFRHLWNKALLRACADGGANRLYDITEGER
Sbjct: 1   MEHAFTPLEPLLSTGNLKYCLVILNQPLDNYFRHLWNKALLRACADGGANRLYDITEGER 60

Query: 61  ESFLPEFINGDFDSIRPEVREYYATKGCELISTPDQDHTDFTKCLKMLQKKIEEKDLKVD 120
           ESFLPEFINGDFDSIRPEVREYYATKGCELISTPDQDHTDFTKCLKMLQKKIEEKDLKVD
Sbjct: 61  ESFLPEFINGDFDSIRPEVREYYATKGCELISTPDQDHTDFTKCLKMLQKKIEEKDLKVD 120

Query: 121 VIVTLGGLAGRFDQIMASVNTLFQATHITPFPIIIIQEESLIYLLQPGKHRLHVDTGMEG 180
           VIVTLGGLAGRFDQIMASVNTLFQATHITPFPIIIIQEESLIYLLQPGKHRLHVDTGMEG
Sbjct: 121 VIVTLGGLAGRFDQIMASVNTLFQATHITPFPIIIIQEESLIYLLQPGKHRLHVDTGMEG 180

Query: 181 DWCGLIPVGQPCMQVTTTGLKWNLTNDVLAFGTLVSTSNTYDGSGVVTVETDHPLLWTMA 240
           DWCGLIPVGQPCMQVTTTGLKWNLTNDVLAFGTLVSTSNTYDGSGVVTVETDHPLLWTMA
Sbjct: 181 DWCGLIPVGQPCMQVTTTGLKWNLTNDVLAFGTLVSTSNTYDGSGVVTVETDHPLLWTMA 240

Query: 241 IKS 243
           IKS
Sbjct: 241 IKS 243


>gi|110227857 thiamin pyrophosphokinase 1 isoform b [Homo sapiens]
          Length = 194

 Score =  387 bits (993), Expect = e-108
 Identities = 194/243 (79%), Positives = 194/243 (79%), Gaps = 49/243 (20%)

Query: 1   MEHAFTPLEPLLSTGNLKYCLVILNQPLDNYFRHLWNKALLRACADGGANRLYDITEGER 60
           MEHAFTPLEPLLSTGNLKYCLVILNQPLDNYFRHLWNKALLRACADGGANRLYDITEGER
Sbjct: 1   MEHAFTPLEPLLSTGNLKYCLVILNQPLDNYFRHLWNKALLRACADGGANRLYDITEGER 60

Query: 61  ESFLPEFINGDFDSIRPEVREYYATKGCELISTPDQDHTDFTKCLKMLQKKIEEKDLKVD 120
           ESFLPEFINGDFDSIRPEVREYYATKGCELISTPDQDHTDFTKCLKMLQKKIEEKDLK  
Sbjct: 61  ESFLPEFINGDFDSIRPEVREYYATKGCELISTPDQDHTDFTKCLKMLQKKIEEKDLK-- 118

Query: 121 VIVTLGGLAGRFDQIMASVNTLFQATHITPFPIIIIQEESLIYLLQPGKHRLHVDTGMEG 180
                                                          GKHRLHVDTGMEG
Sbjct: 119 -----------------------------------------------GKHRLHVDTGMEG 131

Query: 181 DWCGLIPVGQPCMQVTTTGLKWNLTNDVLAFGTLVSTSNTYDGSGVVTVETDHPLLWTMA 240
           DWCGLIPVGQPCMQVTTTGLKWNLTNDVLAFGTLVSTSNTYDGSGVVTVETDHPLLWTMA
Sbjct: 132 DWCGLIPVGQPCMQVTTTGLKWNLTNDVLAFGTLVSTSNTYDGSGVVTVETDHPLLWTMA 191

Query: 241 IKS 243
           IKS
Sbjct: 192 IKS 194


>gi|5454002 putative c-Myc-responsive isoform 1 [Homo sapiens]
          Length = 174

 Score = 29.3 bits (64), Expect = 3.2
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 39  ALLRACADGGANRLYDITEGERESFLPEFINGD 71
           A++R  ADG   +++D  EGE E+ L  +   D
Sbjct: 129 AMIRGAADGSRFQVWDYEEGEVEALLDRYFEAD 161


>gi|56713254 kynurenine aminotransferase III isoform 1 [Homo
           sapiens]
          Length = 454

 Score = 28.9 bits (63), Expect = 4.2
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)

Query: 98  HTDFTKCLKMLQKKIEEK--DLKVDVIVTLGGLAGRFDQIMASVNTLFQATHITPF 151
           H    K L  L +K+ +K  D   +++VT+G     F+ I A ++   +   I PF
Sbjct: 103 HPSLVKALSYLYEKLYQKQIDSNKEILVTVGAYGSLFNTIQALIDEGDEVILIVPF 158


>gi|56713256 kynurenine aminotransferase III isoform 2 [Homo
           sapiens]
          Length = 420

 Score = 28.9 bits (63), Expect = 4.2
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)

Query: 98  HTDFTKCLKMLQKKIEEK--DLKVDVIVTLGGLAGRFDQIMASVNTLFQATHITPF 151
           H    K L  L +K+ +K  D   +++VT+G     F+ I A ++   +   I PF
Sbjct: 69  HPSLVKALSYLYEKLYQKQIDSNKEILVTVGAYGSLFNTIQALIDEGDEVILIVPF 124


>gi|7657619 sushi-repeat-containing protein, X-linked 2 [Homo
           sapiens]
          Length = 465

 Score = 28.1 bits (61), Expect = 7.2
 Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 9/106 (8%)

Query: 65  PEFINGDFDSIRPEVREYYATKGCELISTPDQDHTDFTKCLKMLQKKIEEKDLKVDVIVT 124
           P  IN + +S    + ++Y  +   +IS PD  +  +   + MLQ+     DL+   I+ 
Sbjct: 321 PMKINVNVNSAAGLLDQFYEKQRLLIISAPDPSNRYYKMQISMLQQSTCGLDLRHVTIIE 380

Query: 125 LGGL----AGRFDQIMASVNTL-----FQATHITPFPIIIIQEESL 161
           L G      GR  +   S N +     FQ    + F +++I ++ +
Sbjct: 381 LVGQPPQEVGRIREQQLSANIIEELRQFQRLTRSYFNMVLIDKQGI 426


>gi|224586853 sorbin and SH3 domain containing 2 isoform 7 [Homo
           sapiens]
          Length = 1004

 Score = 27.7 bits (60), Expect = 9.4
 Identities = 14/49 (28%), Positives = 22/49 (44%)

Query: 54  DITEGERESFLPEFINGDFDSIRPEVREYYATKGCELISTPDQDHTDFT 102
           ++T  E+     EF + D D +  +  +Y   +G    S  D DH  FT
Sbjct: 486 EVTSDEQPRAHVEFSDSDQDGVVSDHSDYIHLEGSSFCSESDFDHFSFT 534


>gi|10947118 sorbin and SH3 domain containing 2 isoform 2 [Homo
           sapiens]
          Length = 1100

 Score = 27.7 bits (60), Expect = 9.4
 Identities = 14/49 (28%), Positives = 22/49 (44%)

Query: 54  DITEGERESFLPEFINGDFDSIRPEVREYYATKGCELISTPDQDHTDFT 102
           ++T  E+     EF + D D +  +  +Y   +G    S  D DH  FT
Sbjct: 582 EVTSDEQPRAHVEFSDSDQDGVVSDHSDYIHLEGSSFCSESDFDHFSFT 630


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.139    0.429 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,472,638
Number of Sequences: 37866
Number of extensions: 411078
Number of successful extensions: 788
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 782
Number of HSP's gapped (non-prelim): 9
length of query: 243
length of database: 18,247,518
effective HSP length: 99
effective length of query: 144
effective length of database: 14,498,784
effective search space: 2087824896
effective search space used: 2087824896
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.