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Search of human proteins with 21361468
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21361468 nucleolar protein 11 [Homo sapiens]
(719 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21361468 nucleolar protein 11 [Homo sapiens] 1431 0.0
gi|87299628 biorientation of chromosomes in cell division 1-like... 33 0.71
gi|237858799 adenylate kinase domain containing 1 isoform 1 [Hom... 32 2.1
gi|7661622 hypothetical protein LOC25906 [Homo sapiens] 32 2.7
gi|153791282 nuclear RNA export factor 2B [Homo sapiens] 31 3.5
gi|14277694 nuclear RNA export factor 2 [Homo sapiens] 31 3.5
gi|13430854 nuclear RNA export factor 2 [Homo sapiens] 31 3.5
gi|212549782 caspase 8 associated protein 2 [Homo sapiens] 31 3.5
gi|6912288 caspase 8 associated protein 2 [Homo sapiens] 31 3.5
gi|212549532 caspase 8 associated protein 2 [Homo sapiens] 31 3.5
gi|55769583 progesterone-induced blocking factor 1 [Homo sapiens] 31 4.6
gi|59938780 WD repeat domain 31 isoform 1 [Homo sapiens] 30 7.8
gi|21687048 WD repeat domain 31 isoform 3 [Homo sapiens] 30 7.8
gi|140561024 CASK-interacting protein CIP98 isoform 1 [Homo sapi... 30 7.8
gi|20357504 dystonin isoform 1eB precursor [Homo sapiens] 30 7.8
gi|57242807 zinc finger protein 518 [Homo sapiens] 30 7.8
>gi|21361468 nucleolar protein 11 [Homo sapiens]
Length = 719
Score = 1431 bits (3704), Expect = 0.0
Identities = 719/719 (100%), Positives = 719/719 (100%)
Query: 1 MAALEEEFTLSSVVLSAGPEGLLGVEQSDKTDQFLVTDSGRTVILYKVSDQKPLGSWSVK 60
MAALEEEFTLSSVVLSAGPEGLLGVEQSDKTDQFLVTDSGRTVILYKVSDQKPLGSWSVK
Sbjct: 1 MAALEEEFTLSSVVLSAGPEGLLGVEQSDKTDQFLVTDSGRTVILYKVSDQKPLGSWSVK 60
Query: 61 QGQIITCPAVCNFQTGEYVVVHDNKVLRIWNNEDVNLDKVFKATLSAEVYRILSVQGTEP 120
QGQIITCPAVCNFQTGEYVVVHDNKVLRIWNNEDVNLDKVFKATLSAEVYRILSVQGTEP
Sbjct: 61 QGQIITCPAVCNFQTGEYVVVHDNKVLRIWNNEDVNLDKVFKATLSAEVYRILSVQGTEP 120
Query: 121 LVLFKEGAVRGLEALLADPQQKIETVISDEEVIKWTKFFVVFRHPVLIFITEKHGNYFAY 180
LVLFKEGAVRGLEALLADPQQKIETVISDEEVIKWTKFFVVFRHPVLIFITEKHGNYFAY
Sbjct: 121 LVLFKEGAVRGLEALLADPQQKIETVISDEEVIKWTKFFVVFRHPVLIFITEKHGNYFAY 180
Query: 181 VQMFNSRILTKYTLLLGQDENSVIKSFTASVDRKFISLMSLSSDGCIYETLIPIRPADPE 240
VQMFNSRILTKYTLLLGQDENSVIKSFTASVDRKFISLMSLSSDGCIYETLIPIRPADPE
Sbjct: 181 VQMFNSRILTKYTLLLGQDENSVIKSFTASVDRKFISLMSLSSDGCIYETLIPIRPADPE 240
Query: 241 KNQSLVKSLLLKAVVSGNARNGVALTALDQDHVAVLGSPLAASKECLSVWNIKFQTLQTS 300
KNQSLVKSLLLKAVVSGNARNGVALTALDQDHVAVLGSPLAASKECLSVWNIKFQTLQTS
Sbjct: 241 KNQSLVKSLLLKAVVSGNARNGVALTALDQDHVAVLGSPLAASKECLSVWNIKFQTLQTS 300
Query: 301 KELPQGTSGQLWYYGEHLFMLHGKSLTVIPYKCEVSSLAGALGKLKHSQDPGTHVVSHFV 360
KELPQGTSGQLWYYGEHLFMLHGKSLTVIPYKCEVSSLAGALGKLKHSQDPGTHVVSHFV
Sbjct: 301 KELPQGTSGQLWYYGEHLFMLHGKSLTVIPYKCEVSSLAGALGKLKHSQDPGTHVVSHFV 360
Query: 361 NWETPQGCGLGFQNSEQSRRILRRRKIEVSLQPEVPPSKQLLSTIMKDSEKHIEVEVRKF 420
NWETPQGCGLGFQNSEQSRRILRRRKIEVSLQPEVPPSKQLLSTIMKDSEKHIEVEVRKF
Sbjct: 361 NWETPQGCGLGFQNSEQSRRILRRRKIEVSLQPEVPPSKQLLSTIMKDSEKHIEVEVRKF 420
Query: 421 LALKQTPDFHTVIGDTVTGLLERCKAEPSFYPRNCLMQLIQTHVLSYSLCPDLMEIALKK 480
LALKQTPDFHTVIGDTVTGLLERCKAEPSFYPRNCLMQLIQTHVLSYSLCPDLMEIALKK
Sbjct: 421 LALKQTPDFHTVIGDTVTGLLERCKAEPSFYPRNCLMQLIQTHVLSYSLCPDLMEIALKK 480
Query: 481 KDVQLLQLCLQQFPDIPESVTCACLKIFLSIGDDSLQETDVNMESVFDYSINSVHDEKME 540
KDVQLLQLCLQQFPDIPESVTCACLKIFLSIGDDSLQETDVNMESVFDYSINSVHDEKME
Sbjct: 481 KDVQLLQLCLQQFPDIPESVTCACLKIFLSIGDDSLQETDVNMESVFDYSINSVHDEKME 540
Query: 541 EQTEILQNGFNPEEDKCNNCDQELNKKPQDETKESTSCPVVQKRAALLNAILHSAYSETF 600
EQTEILQNGFNPEEDKCNNCDQELNKKPQDETKESTSCPVVQKRAALLNAILHSAYSETF
Sbjct: 541 EQTEILQNGFNPEEDKCNNCDQELNKKPQDETKESTSCPVVQKRAALLNAILHSAYSETF 600
Query: 601 LLPHLKDIPAQHITLFLKYLYFLYLKCSENATMTLPGIHPPTLNQIMDWICLLLDANFTV 660
LLPHLKDIPAQHITLFLKYLYFLYLKCSENATMTLPGIHPPTLNQIMDWICLLLDANFTV
Sbjct: 601 LLPHLKDIPAQHITLFLKYLYFLYLKCSENATMTLPGIHPPTLNQIMDWICLLLDANFTV 660
Query: 661 VVMMPEAKRLLINLYKLVKSQISVYSELNKIEVSFRELQKLNQEKNNRGLYSIEVLELF 719
VVMMPEAKRLLINLYKLVKSQISVYSELNKIEVSFRELQKLNQEKNNRGLYSIEVLELF
Sbjct: 661 VVMMPEAKRLLINLYKLVKSQISVYSELNKIEVSFRELQKLNQEKNNRGLYSIEVLELF 719
>gi|87299628 biorientation of chromosomes in cell division 1-like
[Homo sapiens]
Length = 3051
Score = 33.5 bits (75), Expect = 0.71
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 513 DDSLQETDVNMESVFDYSINSVHDEKM----EEQTEILQNGFNPEEDKCNNCDQELNKKP 568
D SL ++DV + + D +++SVH + E+ E + + EE + + D+E NK
Sbjct: 392 DFSLIDSDV--DGLTDITVSSVHTSDLSSFEEDTEEEVVTSDSMEEGEITSDDEEKNK-- 447
Query: 569 QDETKESTSCPVVQKRAALLNAILHSAY 596
Q++TK TS K ++ +A +H Y
Sbjct: 448 QNKTKTQTSDSSEGKTKSVRHAYVHKPY 475
>gi|237858799 adenylate kinase domain containing 1 isoform 1 [Homo
sapiens]
Length = 1911
Score = 32.0 bits (71), Expect = 2.1
Identities = 54/249 (21%), Positives = 93/249 (37%), Gaps = 54/249 (21%)
Query: 376 EQSRRILRRRKIEVSLQPEVPPSKQLLSTIMKDSEKHIEVEVRKFLALKQTPDFHTVIGD 435
E++RR+L K++ E D+E E+E + ++ H G
Sbjct: 716 EENRRLLELMKVKAKEAEET------------DNEDEEEIEGDELEVHEEPEASHDTRGS 763
Query: 436 TVTGLLERCKA---EPSFYPRNCLMQLIQTHVLSYSLCPDLMEIALKKKDVQLLQLCLQQ 492
+ E + EP ++T + S + +EI + V L +
Sbjct: 764 WLPEEFEASEVPETEPEAVSEPIEETTVETEIPKGS--KEGLEIEKLSETVVLPEFPEDS 821
Query: 493 FPDIPE--------------------SVTCACLKIF-LSIGD----DSLQETDVNMESVF 527
+PD+PE +++ A +KI L I D + LQ+ ME F
Sbjct: 822 YPDVPEMEPFKEKIGSFIILWKQLEATISEAYIKILNLEIADRTPQELLQKVVETMEKPF 881
Query: 528 DYSINSVHDEKMEEQTEILQNGFNPEEDKCNNCDQELNKKPQDETKESTS--------CP 579
Y+ + E EE+TE Q +E+ ++E ++ +D+ KE CP
Sbjct: 882 QYTAWELTGEDYEEETEDYQTEAEVDEE----LEEEEEEEGEDKMKERKRHLGDTKHFCP 937
Query: 580 VVQKRAALL 588
VV K +L
Sbjct: 938 VVLKENFIL 946
>gi|7661622 hypothetical protein LOC25906 [Homo sapiens]
Length = 121
Score = 31.6 bits (70), Expect = 2.7
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 513 DDSLQETDVNMESVFDYSINSVHDEKMEEQTEILQNGFNPEEDKCNNCDQELNKKPQDE 571
DD +E D + E D +S DE M++ E+ +P++ + N D E N++ QD+
Sbjct: 63 DDEEEEDDEDDE---DSEEDSEDDEDMQDMDEMNDYNESPDDGEVNEVDMEGNEQDQDQ 118
>gi|153791282 nuclear RNA export factor 2B [Homo sapiens]
Length = 626
Score = 31.2 bits (69), Expect = 3.5
Identities = 33/115 (28%), Positives = 48/115 (41%), Gaps = 12/115 (10%)
Query: 197 GQDENSVIKSFTASVDRKFISLMSLSSDGCIYETLIPIRPADPEKNQSLVKSLLLKAVVS 256
GQ + SV+ +FT R FI+ SS CI + +R A P++ QS + S
Sbjct: 509 GQSQGSVL-AFT----RTFIATPGSSSSLCIVNDELFVRDASPQETQSAFSIPVSTLSSS 563
Query: 257 GNARNGVALTALDQDHVAVLGSPLAASKECL--SVWNI-----KFQTLQTSKELP 304
+ Q A G L S++CL + WN F LQT ++P
Sbjct: 564 SEPSLSQEQQEMVQAFSAQSGMKLEWSQKCLQDNEWNYTRAGQAFTMLQTEGKIP 618
>gi|14277694 nuclear RNA export factor 2 [Homo sapiens]
Length = 626
Score = 31.2 bits (69), Expect = 3.5
Identities = 33/115 (28%), Positives = 48/115 (41%), Gaps = 12/115 (10%)
Query: 197 GQDENSVIKSFTASVDRKFISLMSLSSDGCIYETLIPIRPADPEKNQSLVKSLLLKAVVS 256
GQ + SV+ +FT R FI+ SS CI + +R A P++ QS + S
Sbjct: 509 GQSQGSVL-AFT----RTFIATPGSSSSLCIVNDELFVRDASPQETQSAFSIPVSTLSSS 563
Query: 257 GNARNGVALTALDQDHVAVLGSPLAASKECL--SVWNI-----KFQTLQTSKELP 304
+ Q A G L S++CL + WN F LQT ++P
Sbjct: 564 SEPSLSQEQQEMVQAFSAQSGMKLEWSQKCLQDNEWNYTRAGQAFTMLQTEGKIP 618
>gi|13430854 nuclear RNA export factor 2 [Homo sapiens]
Length = 626
Score = 31.2 bits (69), Expect = 3.5
Identities = 33/115 (28%), Positives = 48/115 (41%), Gaps = 12/115 (10%)
Query: 197 GQDENSVIKSFTASVDRKFISLMSLSSDGCIYETLIPIRPADPEKNQSLVKSLLLKAVVS 256
GQ + SV+ +FT R FI+ SS CI + +R A P++ QS + S
Sbjct: 509 GQSQGSVL-AFT----RTFIATPGSSSSLCIVNDELFVRDASPQETQSAFSIPVSTLSSS 563
Query: 257 GNARNGVALTALDQDHVAVLGSPLAASKECL--SVWNI-----KFQTLQTSKELP 304
+ Q A G L S++CL + WN F LQT ++P
Sbjct: 564 SEPSLSQEQQEMVQAFSAQSGMKLEWSQKCLQDNEWNYTRAGQAFTMLQTEGKIP 618
>gi|212549782 caspase 8 associated protein 2 [Homo sapiens]
Length = 1982
Score = 31.2 bits (69), Expect = 3.5
Identities = 51/232 (21%), Positives = 94/232 (40%), Gaps = 26/232 (11%)
Query: 353 THVVSHFVN--WETPQGCGLGFQNSEQSRRILRRRKIEVSLQP--EVPPSKQLLSTIMKD 408
THV H N W +E+ +++ +E + P VP S+Q + +++
Sbjct: 986 THVRIHQTNNKWNKRPDKSSRSSKTEKKDKVMSTSSLE-KIVPIIAVPSSEQEIMHMLRM 1044
Query: 409 SEKHIEVEVRKFLALKQTPDFHTVIGDTVTGLLERCKAEPSFYPRNCLMQLIQTHVLSYS 468
KH+ KF A FH +I + K + + + + T L +
Sbjct: 1045 IRKHVRKNYMKFKAKFSLIQFHRIIESAILSFTSLIK----HLNLHKISKSVTT--LQKN 1098
Query: 469 LCPDLMEIALK--KKDVQLLQLCLQQFPDIPESVTCACLKIFLSIGDDSLQETDVNMESV 526
LC D++E LK KK+ + +L QQ PD+ K DD L ++ +
Sbjct: 1099 LC-DIIESKLKQVKKNGIVDRLFEQQLPDMK--------KKLWKFVDDQLDYLFAKLKKI 1149
Query: 527 F---DYSINSVHDE-KMEEQTEILQNGFNPEEDKCNNCDQELNKKPQDETKE 574
S DE K+E+ ++ N ++ +N ++EL K+ ++++
Sbjct: 1150 LVCDSKSFGRDSDEGKLEKTSKQNAQYSNSQKRSVDNSNRELLKEKLSKSED 1201
>gi|6912288 caspase 8 associated protein 2 [Homo sapiens]
Length = 1982
Score = 31.2 bits (69), Expect = 3.5
Identities = 51/232 (21%), Positives = 94/232 (40%), Gaps = 26/232 (11%)
Query: 353 THVVSHFVN--WETPQGCGLGFQNSEQSRRILRRRKIEVSLQP--EVPPSKQLLSTIMKD 408
THV H N W +E+ +++ +E + P VP S+Q + +++
Sbjct: 986 THVRIHQTNNKWNKRPDKSSRSSKTEKKDKVMSTSSLE-KIVPIIAVPSSEQEIMHMLRM 1044
Query: 409 SEKHIEVEVRKFLALKQTPDFHTVIGDTVTGLLERCKAEPSFYPRNCLMQLIQTHVLSYS 468
KH+ KF A FH +I + K + + + + T L +
Sbjct: 1045 IRKHVRKNYMKFKAKFSLIQFHRIIESAILSFTSLIK----HLNLHKISKSVTT--LQKN 1098
Query: 469 LCPDLMEIALK--KKDVQLLQLCLQQFPDIPESVTCACLKIFLSIGDDSLQETDVNMESV 526
LC D++E LK KK+ + +L QQ PD+ K DD L ++ +
Sbjct: 1099 LC-DIIESKLKQVKKNGIVDRLFEQQLPDMK--------KKLWKFVDDQLDYLFAKLKKI 1149
Query: 527 F---DYSINSVHDE-KMEEQTEILQNGFNPEEDKCNNCDQELNKKPQDETKE 574
S DE K+E+ ++ N ++ +N ++EL K+ ++++
Sbjct: 1150 LVCDSKSFGRDSDEGKLEKTSKQNAQYSNSQKRSVDNSNRELLKEKLSKSED 1201
>gi|212549532 caspase 8 associated protein 2 [Homo sapiens]
Length = 1982
Score = 31.2 bits (69), Expect = 3.5
Identities = 51/232 (21%), Positives = 94/232 (40%), Gaps = 26/232 (11%)
Query: 353 THVVSHFVN--WETPQGCGLGFQNSEQSRRILRRRKIEVSLQP--EVPPSKQLLSTIMKD 408
THV H N W +E+ +++ +E + P VP S+Q + +++
Sbjct: 986 THVRIHQTNNKWNKRPDKSSRSSKTEKKDKVMSTSSLE-KIVPIIAVPSSEQEIMHMLRM 1044
Query: 409 SEKHIEVEVRKFLALKQTPDFHTVIGDTVTGLLERCKAEPSFYPRNCLMQLIQTHVLSYS 468
KH+ KF A FH +I + K + + + + T L +
Sbjct: 1045 IRKHVRKNYMKFKAKFSLIQFHRIIESAILSFTSLIK----HLNLHKISKSVTT--LQKN 1098
Query: 469 LCPDLMEIALK--KKDVQLLQLCLQQFPDIPESVTCACLKIFLSIGDDSLQETDVNMESV 526
LC D++E LK KK+ + +L QQ PD+ K DD L ++ +
Sbjct: 1099 LC-DIIESKLKQVKKNGIVDRLFEQQLPDMK--------KKLWKFVDDQLDYLFAKLKKI 1149
Query: 527 F---DYSINSVHDE-KMEEQTEILQNGFNPEEDKCNNCDQELNKKPQDETKE 574
S DE K+E+ ++ N ++ +N ++EL K+ ++++
Sbjct: 1150 LVCDSKSFGRDSDEGKLEKTSKQNAQYSNSQKRSVDNSNRELLKEKLSKSED 1201
>gi|55769583 progesterone-induced blocking factor 1 [Homo sapiens]
Length = 757
Score = 30.8 bits (68), Expect = 4.6
Identities = 41/207 (19%), Positives = 83/207 (40%), Gaps = 17/207 (8%)
Query: 399 KQLLSTIMKDSEKHIEVEVRKFLALKQTPDFHTVI--GDTVTGLLERCKAEPSFYPRNCL 456
KQL T +D + + EV++R + D +I GD ++ K+E + +
Sbjct: 220 KQLTETYEEDRKNYSEVQIRCQRLALELADTKQLIQQGDYRQENYDKVKSERDALEQEVI 279
Query: 457 MQLIQTHVLSYSLCPDLMEIALKKKDVQLLQLCLQQFPDIPE---------SVTCACLKI 507
+ +L S E + K+V L+ + E SV CA +
Sbjct: 280 ELRRKHEILEASHMIQTKERSELSKEVVTLEQTVTLLQKDKEYLNRQNMELSVRCAHEED 339
Query: 508 FLSIGDDSLQETDVNMESVFDYSINS------VHDEKMEEQTEILQNGFNPEEDKCNNCD 561
L L+E+ E +++ + S ++ K+ ++ E ++ N E D+ N
Sbjct: 340 RLERLQAQLEESKKAREEMYEKYVASRDHYKTEYENKLHDELEQIRLKTNQEIDQLRNAS 399
Query: 562 QELNKKPQDETKESTSCPVVQKRAALL 588
+E+ ++ +E+ V +K A++
Sbjct: 400 REMYERENRNLREARDNAVAEKERAVM 426
>gi|59938780 WD repeat domain 31 isoform 1 [Homo sapiens]
Length = 367
Score = 30.0 bits (66), Expect = 7.8
Identities = 26/119 (21%), Positives = 51/119 (42%), Gaps = 4/119 (3%)
Query: 24 GVEQSDKTDQFLVTDSGRTVILYKVSDQKPLGSWSVKQGQIITCPAVCNFQTGEYVV-VH 82
G+ S + Q T++L+ V + + SV + + +C Y++
Sbjct: 151 GLAVSPDSSQLCTGSRDNTLLLWDVVTGQSVERASVSRNVVTH---LCWVPREPYILQTS 207
Query: 83 DNKVLRIWNNEDVNLDKVFKATLSAEVYRILSVQGTEPLVLFKEGAVRGLEALLADPQQ 141
++K LR+W++ + + +F A + Y +SV G + + G EA L D +Q
Sbjct: 208 EDKTLRLWDSRGLQVAHMFPAKQHIQTYCEVSVDGHKCISCSNGFGGEGCEATLWDLRQ 266
>gi|21687048 WD repeat domain 31 isoform 3 [Homo sapiens]
Length = 366
Score = 30.0 bits (66), Expect = 7.8
Identities = 26/119 (21%), Positives = 51/119 (42%), Gaps = 4/119 (3%)
Query: 24 GVEQSDKTDQFLVTDSGRTVILYKVSDQKPLGSWSVKQGQIITCPAVCNFQTGEYVV-VH 82
G+ S + Q T++L+ V + + SV + + +C Y++
Sbjct: 150 GLAVSPDSSQLCTGSRDNTLLLWDVVTGQSVERASVSRNVVTH---LCWVPREPYILQTS 206
Query: 83 DNKVLRIWNNEDVNLDKVFKATLSAEVYRILSVQGTEPLVLFKEGAVRGLEALLADPQQ 141
++K LR+W++ + + +F A + Y +SV G + + G EA L D +Q
Sbjct: 207 EDKTLRLWDSRGLQVAHMFPAKQHIQTYCEVSVDGHKCISCSNGFGGEGCEATLWDLRQ 265
>gi|140561024 CASK-interacting protein CIP98 isoform 1 [Homo
sapiens]
Length = 907
Score = 30.0 bits (66), Expect = 7.8
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Query: 315 GEHLFMLHGKSLTVIPYKCEVSSLAGA----LGKLKHSQDPGTHVVSHFVNWETPQG 367
G+ + ++ KSL + + V +L G+ L + PG +V +H W PQG
Sbjct: 185 GDQILRVNDKSLARVTHAEAVKALKGSKKLVLSVYSAGRIPGGYVTNHIYTWVDPQG 241
>gi|20357504 dystonin isoform 1eB precursor [Homo sapiens]
Length = 3062
Score = 30.0 bits (66), Expect = 7.8
Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 12/87 (13%)
Query: 546 LQNGFNPEEDKCNNCDQELNK----KPQ-DETKESTSCPVVQKRAALLNAILHSAYSETF 600
L N E+D+C NK +P+ +ET E+ C + ++ + N +++S +S++
Sbjct: 1724 LNNASGREKDECTATPSSFNKCHCGEPEHEETPENRKCAIDEEFNEMRNTVINSEFSQSG 1783
Query: 601 LL-------PHLKDIPAQHITLFLKYL 620
L P + P+ + + YL
Sbjct: 1784 KLASTISIDPKVNSSPSVCVPSLISYL 1810
>gi|57242807 zinc finger protein 518 [Homo sapiens]
Length = 1483
Score = 30.0 bits (66), Expect = 7.8
Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 538 KMEEQTEILQNGFNPEEDKCNNCDQELNKKPQDETKESTSCPVVQKRAALLNAILHSAYS 597
K E+Q+ ++Q + E+D+ +C+ +K P+ E+++ T Q A S +
Sbjct: 357 KSEDQSHVVQEHLSEEKDERLHCENN-DKAPESESEKPTPLSTGQGNRAEEGPNASSGFM 415
Query: 598 ETFLL-PHLKDI 608
+T +L P LK++
Sbjct: 416 KTAVLGPTLKNV 427
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,796,951
Number of Sequences: 37866
Number of extensions: 1178936
Number of successful extensions: 3369
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 3365
Number of HSP's gapped (non-prelim): 22
length of query: 719
length of database: 18,247,518
effective HSP length: 110
effective length of query: 609
effective length of database: 14,082,258
effective search space: 8576095122
effective search space used: 8576095122
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.