Guide to the Human Genome
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Search of human proteins with 21361370

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|21361370 brain glycogen phosphorylase [Homo sapiens]
         (843 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|21361370 brain glycogen phosphorylase [Homo sapiens]              1716   0.0  
gi|5032009 muscle glycogen phosphorylase [Homo sapiens]              1485   0.0  
gi|71037379 liver glycogen phosphorylase [Homo sapiens]              1438   0.0  
gi|154090976 sterile alpha and TIR motif containing 1 [Homo sapi...    34   0.50 
gi|238859593 UDP-glucose ceramide glucosyltransferase-like 2 [Ho...    32   2.5  
gi|149589008 peptidase D [Homo sapiens]                                32   3.2  
gi|59891448 rapamycin-insensitive companion of mTOR [Homo sapiens]     31   4.2  
gi|94681046 cyclin M4 [Homo sapiens]                                   31   5.5  
gi|4504677 interleukin 7 precursor [Homo sapiens]                      30   9.4  
gi|38505170 Ras protein-specific guanine nucleotide-releasing fa...    30   9.4  

>gi|21361370 brain glycogen phosphorylase [Homo sapiens]
          Length = 843

 Score = 1716 bits (4445), Expect = 0.0
 Identities = 843/843 (100%), Positives = 843/843 (100%)

Query: 1   MAKPLTDSEKRKQISVRGLAGLGDVAEVRKSFNRHLHFTLVKDRNVATPRDYFFALAHTV 60
           MAKPLTDSEKRKQISVRGLAGLGDVAEVRKSFNRHLHFTLVKDRNVATPRDYFFALAHTV
Sbjct: 1   MAKPLTDSEKRKQISVRGLAGLGDVAEVRKSFNRHLHFTLVKDRNVATPRDYFFALAHTV 60

Query: 61  RDHLVGRWIRTQQHYYERDPKRIYYLSLEFYMGRTLQNTMVNLGLQNACDEAIYQLGLDL 120
           RDHLVGRWIRTQQHYYERDPKRIYYLSLEFYMGRTLQNTMVNLGLQNACDEAIYQLGLDL
Sbjct: 61  RDHLVGRWIRTQQHYYERDPKRIYYLSLEFYMGRTLQNTMVNLGLQNACDEAIYQLGLDL 120

Query: 121 EELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKIVNGWQVEEA 180
           EELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKIVNGWQVEEA
Sbjct: 121 EELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKIVNGWQVEEA 180

Query: 181 DDWLRYGNPWEKARPEYMLPVHFYGRVEHTPDGVKWLDTQVVLAMPYDTPVPGYKNNTVN 240
           DDWLRYGNPWEKARPEYMLPVHFYGRVEHTPDGVKWLDTQVVLAMPYDTPVPGYKNNTVN
Sbjct: 181 DDWLRYGNPWEKARPEYMLPVHFYGRVEHTPDGVKWLDTQVVLAMPYDTPVPGYKNNTVN 240

Query: 241 TMRLWSAKAPNDFKLQDFNVGDYIEAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFV 300
           TMRLWSAKAPNDFKLQDFNVGDYIEAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFV
Sbjct: 241 TMRLWSAKAPNDFKLQDFNVGDYIEAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFV 300

Query: 301 VAATLQDIIRRFKSSKFGCRDPVRTCFETFPDKVAIQLNDTHPALSIPELMRILVDVEKV 360
           VAATLQDIIRRFKSSKFGCRDPVRTCFETFPDKVAIQLNDTHPALSIPELMRILVDVEKV
Sbjct: 301 VAATLQDIIRRFKSSKFGCRDPVRTCFETFPDKVAIQLNDTHPALSIPELMRILVDVEKV 360

Query: 361 DWDKAWEITKKTCAYTNHTVLPEALERWPVSMFEKLLPRHLEIIYAINQRHLDHVAALFP 420
           DWDKAWEITKKTCAYTNHTVLPEALERWPVSMFEKLLPRHLEIIYAINQRHLDHVAALFP
Sbjct: 361 DWDKAWEITKKTCAYTNHTVLPEALERWPVSMFEKLLPRHLEIIYAINQRHLDHVAALFP 420

Query: 421 GDVDRLRRMSVIEEGDCKRINMAHLCVIGSHAVNGVARIHSEIVKQSVFKDFYELEPEKF 480
           GDVDRLRRMSVIEEGDCKRINMAHLCVIGSHAVNGVARIHSEIVKQSVFKDFYELEPEKF
Sbjct: 421 GDVDRLRRMSVIEEGDCKRINMAHLCVIGSHAVNGVARIHSEIVKQSVFKDFYELEPEKF 480

Query: 481 QNKTNGITPRRWLLLCNPGLADTIVEKIGEEFLTDLSQLKKLLPLVSDEVFIRDVAKVKQ 540
           QNKTNGITPRRWLLLCNPGLADTIVEKIGEEFLTDLSQLKKLLPLVSDEVFIRDVAKVKQ
Sbjct: 481 QNKTNGITPRRWLLLCNPGLADTIVEKIGEEFLTDLSQLKKLLPLVSDEVFIRDVAKVKQ 540

Query: 541 ENKLKFSAFLEKEYKVKINPSSMFDVHVKRIHEYKRQLLNCLHVVTLYNRIKRDPAKAFV 600
           ENKLKFSAFLEKEYKVKINPSSMFDVHVKRIHEYKRQLLNCLHVVTLYNRIKRDPAKAFV
Sbjct: 541 ENKLKFSAFLEKEYKVKINPSSMFDVHVKRIHEYKRQLLNCLHVVTLYNRIKRDPAKAFV 600

Query: 601 PRTVMIGGKAAPGYHMAKLIIKLVTSIGDVVNHDPVVGDRLKVIFLENYRVSLAEKVIPA 660
           PRTVMIGGKAAPGYHMAKLIIKLVTSIGDVVNHDPVVGDRLKVIFLENYRVSLAEKVIPA
Sbjct: 601 PRTVMIGGKAAPGYHMAKLIIKLVTSIGDVVNHDPVVGDRLKVIFLENYRVSLAEKVIPA 660

Query: 661 ADLSQQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGAENLFIFGLRVEDVE 720
           ADLSQQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGAENLFIFGLRVEDVE
Sbjct: 661 ADLSQQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGAENLFIFGLRVEDVE 720

Query: 721 ALDRKGYNAREYYDHLPELKQAVDQISSGFFSPKEPDCFKDIVNMLMHHDRFKVFADYEA 780
           ALDRKGYNAREYYDHLPELKQAVDQISSGFFSPKEPDCFKDIVNMLMHHDRFKVFADYEA
Sbjct: 721 ALDRKGYNAREYYDHLPELKQAVDQISSGFFSPKEPDCFKDIVNMLMHHDRFKVFADYEA 780

Query: 781 YMQCQAQVDQLYRNPKEWTKKVIRNIACSGKFSSDRTITEYAREIWGVEPSDLQIPPPNI 840
           YMQCQAQVDQLYRNPKEWTKKVIRNIACSGKFSSDRTITEYAREIWGVEPSDLQIPPPNI
Sbjct: 781 YMQCQAQVDQLYRNPKEWTKKVIRNIACSGKFSSDRTITEYAREIWGVEPSDLQIPPPNI 840

Query: 841 PRD 843
           PRD
Sbjct: 841 PRD 843


>gi|5032009 muscle glycogen phosphorylase [Homo sapiens]
          Length = 842

 Score = 1485 bits (3844), Expect = 0.0
 Identities = 704/839 (83%), Positives = 782/839 (93%)

Query: 1   MAKPLTDSEKRKQISVRGLAGLGDVAEVRKSFNRHLHFTLVKDRNVATPRDYFFALAHTV 60
           M++PL+D EKRKQISVRGLAG+ +V E++K+FNRHLHFTLVKDRNVATPRDY+FALAHTV
Sbjct: 1   MSRPLSDQEKRKQISVRGLAGVENVTELKKNFNRHLHFTLVKDRNVATPRDYYFALAHTV 60

Query: 61  RDHLVGRWIRTQQHYYERDPKRIYYLSLEFYMGRTLQNTMVNLGLQNACDEAIYQLGLDL 120
           RDHLVGRWIRTQQHYYE+DPKRIYYLSLEFYMGRTLQNTMVNL L+NACDEA YQLGLD+
Sbjct: 61  RDHLVGRWIRTQQHYYEKDPKRIYYLSLEFYMGRTLQNTMVNLALENACDEATYQLGLDM 120

Query: 121 EELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKIVNGWQVEEA 180
           EELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKI  GWQ+EEA
Sbjct: 121 EELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKISGGWQMEEA 180

Query: 181 DDWLRYGNPWEKARPEYMLPVHFYGRVEHTPDGVKWLDTQVVLAMPYDTPVPGYKNNTVN 240
           DDWLRYGNPWEKARPE+ LPVHFYG VEHT  G KW+DTQVVLAMPYDTPVPGY+NN VN
Sbjct: 181 DDWLRYGNPWEKARPEFTLPVHFYGHVEHTSQGAKWVDTQVVLAMPYDTPVPGYRNNVVN 240

Query: 241 TMRLWSAKAPNDFKLQDFNVGDYIEAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFV 300
           TMRLWSAKAPNDF L+DFNVG YI+AVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFV
Sbjct: 241 TMRLWSAKAPNDFNLKDFNVGGYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFV 300

Query: 301 VAATLQDIIRRFKSSKFGCRDPVRTCFETFPDKVAIQLNDTHPALSIPELMRILVDVEKV 360
           VAATLQDIIRRFKSSKFGCRDPVRT F+ FPDKVAIQLNDTHP+L+IPELMRILVD+E++
Sbjct: 301 VAATLQDIIRRFKSSKFGCRDPVRTNFDAFPDKVAIQLNDTHPSLAIPELMRILVDLERM 360

Query: 361 DWDKAWEITKKTCAYTNHTVLPEALERWPVSMFEKLLPRHLEIIYAINQRHLDHVAALFP 420
           DWDKAW++T +TCAYTNHTVLPEALERWPV + E LLPRHL+IIY INQR L+ VAA FP
Sbjct: 361 DWDKAWDVTVRTCAYTNHTVLPEALERWPVHLLETLLPRHLQIIYEINQRFLNRVAAAFP 420

Query: 421 GDVDRLRRMSVIEEGDCKRINMAHLCVIGSHAVNGVARIHSEIVKQSVFKDFYELEPEKF 480
           GDVDRLRRMS++EEG  KRINMAHLC+ GSHAVNGVARIHSEI+K+++FKDFYELEP KF
Sbjct: 421 GDVDRLRRMSLVEEGAVKRINMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKF 480

Query: 481 QNKTNGITPRRWLLLCNPGLADTIVEKIGEEFLTDLSQLKKLLPLVSDEVFIRDVAKVKQ 540
           QNKTNGITPRRWL+LCNPGLA+ I E+IGE+F++DL QL+KLL  V DE FIRDVAKVKQ
Sbjct: 481 QNKTNGITPRRWLVLCNPGLAEVIAERIGEDFISDLDQLRKLLSFVDDEAFIRDVAKVKQ 540

Query: 541 ENKLKFSAFLEKEYKVKINPSSMFDVHVKRIHEYKRQLLNCLHVVTLYNRIKRDPAKAFV 600
           ENKLKF+A+LE+EYKV INP+S+FD+ VKRIHEYKRQLLNCLHV+TLYNRIKR+P K FV
Sbjct: 541 ENKLKFAAYLEREYKVHINPNSLFDIQVKRIHEYKRQLLNCLHVITLYNRIKREPNKFFV 600

Query: 601 PRTVMIGGKAAPGYHMAKLIIKLVTSIGDVVNHDPVVGDRLKVIFLENYRVSLAEKVIPA 660
           PRTVMIGGKAAPGYHMAK+II+LVT+IGDVVNHDP VGDRL+VIFLENYRVSLAEKVIPA
Sbjct: 601 PRTVMIGGKAAPGYHMAKMIIRLVTAIGDVVNHDPAVGDRLRVIFLENYRVSLAEKVIPA 660

Query: 661 ADLSQQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGAENLFIFGLRVEDVE 720
           ADLS+QISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAG EN FIFG+RVEDV+
Sbjct: 661 ADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVD 720

Query: 721 ALDRKGYNAREYYDHLPELKQAVDQISSGFFSPKEPDCFKDIVNMLMHHDRFKVFADYEA 780
            LD++GYNA+EYYD +PEL+Q ++Q+SSGFFSPK+PD FKDIVNMLMHHDRFKVFADYE 
Sbjct: 721 KLDQRGYNAQEYYDRIPELRQVIEQLSSGFFSPKQPDLFKDIVNMLMHHDRFKVFADYED 780

Query: 781 YMQCQAQVDQLYRNPKEWTKKVIRNIACSGKFSSDRTITEYAREIWGVEPSDLQIPPPN 839
           Y++CQ +V  LY+NP+EWT+ VIRNIA SGKFSSDRTI +YAREIWGVEPS  ++P P+
Sbjct: 781 YIKCQEKVSALYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEPSRQRLPAPD 839


>gi|71037379 liver glycogen phosphorylase [Homo sapiens]
          Length = 847

 Score = 1438 bits (3722), Expect = 0.0
 Identities = 687/839 (81%), Positives = 765/839 (91%)

Query: 1   MAKPLTDSEKRKQISVRGLAGLGDVAEVRKSFNRHLHFTLVKDRNVATPRDYFFALAHTV 60
           MAKPLTD EKR+QIS+RG+ G+ +VAE++KSFNRHLHFTLVKDRNVAT RDY+FALAHTV
Sbjct: 1   MAKPLTDQEKRRQISIRGIVGVENVAELKKSFNRHLHFTLVKDRNVATTRDYYFALAHTV 60

Query: 61  RDHLVGRWIRTQQHYYERDPKRIYYLSLEFYMGRTLQNTMVNLGLQNACDEAIYQLGLDL 120
           RDHLVGRWIRTQQHYY++ PKR+YYLSLEFYMGRTLQNTM+NLGLQNACDEAIYQLGLD+
Sbjct: 61  RDHLVGRWIRTQQHYYDKCPKRVYYLSLEFYMGRTLQNTMINLGLQNACDEAIYQLGLDI 120

Query: 121 EELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKIVNGWQVEEA 180
           EELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYE+GIFNQKI +GWQVEEA
Sbjct: 121 EELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEYGIFNQKIRDGWQVEEA 180

Query: 181 DDWLRYGNPWEKARPEYMLPVHFYGRVEHTPDGVKWLDTQVVLAMPYDTPVPGYKNNTVN 240
           DDWLRYGNPWEK+RPE+MLPVHFYG+VEHT  G KW+DTQVVLA+PYDTPVPGY NNTVN
Sbjct: 181 DDWLRYGNPWEKSRPEFMLPVHFYGKVEHTNTGTKWIDTQVVLALPYDTPVPGYMNNTVN 240

Query: 241 TMRLWSAKAPNDFKLQDFNVGDYIEAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFV 300
           TMRLWSA+APNDF L+DFNVGDYI+AVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFV
Sbjct: 241 TMRLWSARAPNDFNLRDFNVGDYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFV 300

Query: 301 VAATLQDIIRRFKSSKFGCRDPVRTCFETFPDKVAIQLNDTHPALSIPELMRILVDVEKV 360
           VAATLQDIIRRFK+SKFG      T F+ FPD+VAIQLNDTHPAL+IPELMRI VD+EK+
Sbjct: 301 VAATLQDIIRRFKASKFGSTRGAGTVFDAFPDQVAIQLNDTHPALAIPELMRIFVDIEKL 360

Query: 361 DWDKAWEITKKTCAYTNHTVLPEALERWPVSMFEKLLPRHLEIIYAINQRHLDHVAALFP 420
            W KAWE+T+KT AYTNHTVLPEALERWPV + EKLLPRHLEIIY INQ+HLD + ALFP
Sbjct: 361 PWSKAWELTQKTFAYTNHTVLPEALERWPVDLVEKLLPRHLEIIYEINQKHLDRIVALFP 420

Query: 421 GDVDRLRRMSVIEEGDCKRINMAHLCVIGSHAVNGVARIHSEIVKQSVFKDFYELEPEKF 480
            DVDRLRRMS+IEE   KRINMAHLC++GSHAVNGVA+IHS+IVK  VFKDF ELEP+KF
Sbjct: 421 KDVDRLRRMSLIEEEGSKRINMAHLCIVGSHAVNGVAKIHSDIVKTKVFKDFSELEPDKF 480

Query: 481 QNKTNGITPRRWLLLCNPGLADTIVEKIGEEFLTDLSQLKKLLPLVSDEVFIRDVAKVKQ 540
           QNKTNGITPRRWLLLCNPGLA+ I EKIGE+++ DLSQL KL   + D+VF+R++AKVKQ
Sbjct: 481 QNKTNGITPRRWLLLCNPGLAELIAEKIGEDYVKDLSQLTKLHSFLGDDVFLRELAKVKQ 540

Query: 541 ENKLKFSAFLEKEYKVKINPSSMFDVHVKRIHEYKRQLLNCLHVVTLYNRIKRDPAKAFV 600
           ENKLKFS FLE EYKVKINPSSMFDV VKRIHEYKRQLLNCLHV+T+YNRIK+DP K FV
Sbjct: 541 ENKLKFSQFLETEYKVKINPSSMFDVQVKRIHEYKRQLLNCLHVITMYNRIKKDPKKLFV 600

Query: 601 PRTVMIGGKAAPGYHMAKLIIKLVTSIGDVVNHDPVVGDRLKVIFLENYRVSLAEKVIPA 660
           PRTV+IGGKAAPGYHMAK+IIKL+TS+ DVVN+DP+VG +LKVIFLENYRVSLAEKVIPA
Sbjct: 601 PRTVIIGGKAAPGYHMAKMIIKLITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPA 660

Query: 661 ADLSQQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGAENLFIFGLRVEDVE 720
            DLS+QISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAG ENLFIFG+R++DV 
Sbjct: 661 TDLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENLFIFGMRIDDVA 720

Query: 721 ALDRKGYNAREYYDHLPELKQAVDQISSGFFSPKEPDCFKDIVNMLMHHDRFKVFADYEA 780
           ALD+KGY A+EYY+ LPELK  +DQI +GFFSPK+PD FKDI+NML +HDRFKVFADYEA
Sbjct: 721 ALDKKGYEAKEYYEALPELKLVIDQIDNGFFSPKQPDLFKDIINMLFYHDRFKVFADYEA 780

Query: 781 YMQCQAQVDQLYRNPKEWTKKVIRNIACSGKFSSDRTITEYAREIWGVEPSDLQIPPPN 839
           Y++CQ +V QLY NPK W   V++NIA SGKFSSDRTI EYA+ IW VEPSDL+I   N
Sbjct: 781 YVKCQDKVSQLYMNPKAWNTMVLKNIAASGKFSSDRTIKEYAQNIWNVEPSDLKISLSN 839


>gi|154090976 sterile alpha and TIR motif containing 1 [Homo
           sapiens]
          Length = 724

 Score = 34.3 bits (77), Expect = 0.50
 Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 14/104 (13%)

Query: 458 RIHSEIVKQSVFKDFYELEPEKFQNK--TNGITPRRWLLLCNPGLADTIVEK------IG 509
           ++H ++   SVF D  +LE  KF++K   + +  R ++L+ +PG  D  ++       + 
Sbjct: 581 KVHLQLHGFSVFIDVEKLEAGKFEDKLIQSVMGARNFVLVLSPGALDKCMQDHDCKDWVH 640

Query: 510 EEFLTDLSQLKKLLPLV------SDEVFIRDVAKVKQENKLKFS 547
           +E +T LS  K ++P++        +V   D+  V   N +K+S
Sbjct: 641 KEIVTALSCGKNIVPIIDGFEWPEPQVLPEDMQAVLTFNGIKWS 684


>gi|238859593 UDP-glucose ceramide glucosyltransferase-like 2 [Homo
            sapiens]
          Length = 1516

 Score = 32.0 bits (71), Expect = 2.5
 Identities = 29/121 (23%), Positives = 58/121 (47%), Gaps = 12/121 (9%)

Query: 480  FQNKTNGITPRRWLLLCNPGLADTIVEKIGEEFLTDLSQLKKLLPLVSDEVFIRDVAKV- 538
            FQ K N   P  W+L  + G ++ I + +G E     + L+ ++ +++   F   + KV 
Sbjct: 1132 FQLKAN---PGAWILRLHQGKSEDIYQIVGHEGTDSQADLEDIIVVLNS--FKSKILKVK 1186

Query: 539  --KQENKLKFSAFLEKEYKVK--INPSSMFDVHVKRIHEYKRQLLNCLHVVT--LYNRIK 592
              K+ +K+K     +++ K K   +    F V + + ++ ++ +LN   V +  LY R  
Sbjct: 1187 VKKETDKIKEDILTDEDEKTKGLWDSIKSFTVSLHKENKKEKDVLNIFSVASGHLYERFL 1246

Query: 593  R 593
            R
Sbjct: 1247 R 1247


>gi|149589008 peptidase D [Homo sapiens]
          Length = 493

 Score = 31.6 bits (70), Expect = 3.2
 Identities = 33/137 (24%), Positives = 59/137 (43%), Gaps = 12/137 (8%)

Query: 381 LPEALERWPVSMFEKLLPRHLEIIYAINQ-RHLDHVAALF----PGDVDRLRRMSVIEEG 435
           LP +   W   +  K    H +  YA++  +++D +A++     P  +  LR ++     
Sbjct: 100 LPASHATWMGKIHSK---EHFKEKYAVDDVQYVDEIASVLTSQKPSVLLTLRGVNTDSGS 156

Query: 436 DCKRINMAHLCVIGSHAVNGVARIHSEIVKQSVFKDFYELEPEKFQNKTNGITPRRWLLL 495
            C+    A    I    VN    +H EIV+  VFK   ELE  ++ NK +    R  +  
Sbjct: 157 VCRE---ASFDGISKFEVNNTI-LHPEIVECRVFKTDMELEVLRYTNKISSEAHREVMKA 212

Query: 496 CNPGLADTIVEKIGEEF 512
              G+ +  +E + E +
Sbjct: 213 VKVGMKEYELESLFEHY 229


>gi|59891448 rapamycin-insensitive companion of mTOR [Homo sapiens]
          Length = 1708

 Score = 31.2 bits (69), Expect = 4.2
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 179 EADDWLRYGNPWEKARPEYMLPVHFYGRVEHTPDGVKWLDTQVVL 223
           + D+++R  N     RP   LP+H YG++ H   G   L+ Q ++
Sbjct: 859 DGDNYVRRSNQ-RLQRPHVYLPIHLYGQLVHHKTGCHLLEVQNII 902


>gi|94681046 cyclin M4 [Homo sapiens]
          Length = 775

 Score = 30.8 bits (68), Expect = 5.5
 Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 5/76 (6%)

Query: 497 NPGLADTIVEKIGEEFLTD-LSQLKKLLPLVSDEVFI--RDVAKVKQENKLKFSAF--LE 551
           N G  D   E +G   L D + ++ K   L   +++   R   +V ++NK  FSAF   +
Sbjct: 480 NEGEGDPFYEVLGLVTLEDVIEEIIKSEILDESDMYTDNRSRKRVSEKNKRDFSAFKDAD 539

Query: 552 KEYKVKINPSSMFDVH 567
            E KVKI+P  +   H
Sbjct: 540 NELKVKISPQLLLAAH 555


>gi|4504677 interleukin 7 precursor [Homo sapiens]
          Length = 177

 Score = 30.0 bits (66), Expect = 9.4
 Identities = 15/51 (29%), Positives = 25/51 (49%)

Query: 531 FIRDVAKVKQENKLKFSAFLEKEYKVKINPSSMFDVHVKRIHEYKRQLLNC 581
           F R +    +E    F A  +    +K+N +  FD+H+ ++ E    LLNC
Sbjct: 67  FKRHICDANKEGMFLFRAARKLRQFLKMNSTGDFDLHLLKVSEGTTILLNC 117


>gi|38505170 Ras protein-specific guanine nucleotide-releasing
           factor 2 [Homo sapiens]
          Length = 1237

 Score = 30.0 bits (66), Expect = 9.4
 Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 24/95 (25%)

Query: 236 NNTVNTMRLWSAKAPNDFKLQD---FNVGDYIEAVL--------DRNLAENISRVLYPND 284
           N  +N +R W +K   DF+L +    NV + +E VL        +R  A NI R L  +D
Sbjct: 916 NRVLNVLRHWVSKHAQDFELNNELKMNVLNLLEEVLRDPDLLPQERKAAANILRALSQDD 975

Query: 285 NFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGC 319
                 ++ LK         L+DII+     K  C
Sbjct: 976 Q----DDIHLK---------LEDIIQMTDCMKAEC 997


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.138    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,826,506
Number of Sequences: 37866
Number of extensions: 1399504
Number of successful extensions: 2773
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 2769
Number of HSP's gapped (non-prelim): 10
length of query: 843
length of database: 18,247,518
effective HSP length: 111
effective length of query: 732
effective length of database: 14,044,392
effective search space: 10280494944
effective search space used: 10280494944
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 66 (30.0 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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