Guide to the Human Genome
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Search of human proteins with 210031210

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|210031210 transmembrane protein with metallophosphoesterase
domain isoform 2 [Homo sapiens]
         (316 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|210031210 transmembrane protein with metallophosphoesterase d...   627   e-180
gi|210031196 transmembrane protein with metallophosphoesterase d...   627   e-180
gi|17017963 forkhead box P2 isoform I [Homo sapiens]                   30   2.8  
gi|22538413 forkhead box P2 isoform III [Homo sapiens]                 30   2.8  
gi|149999352 forkhead box P2 isoform II [Homo sapiens]                 30   2.8  
gi|30581111 minor histocompatibility antigen 13 isoform 3 [Homo ...    28   8.2  
gi|30581109 minor histocompatibility antigen 13 isoform 2 [Homo ...    28   8.2  
gi|7706441 vacuolar protein sorting 29 isoform 1 [Homo sapiens]        28   8.2  
gi|17402912 vacuolar protein sorting 29 isoform 2 [Homo sapiens]       28   8.2  
gi|6631100 natural killer-tumor recognition sequence [Homo sapiens]    28   8.2  
gi|40254834 kinesin family member 1C [Homo sapiens]                    28   8.2  

>gi|210031210 transmembrane protein with metallophosphoesterase
           domain isoform 2 [Homo sapiens]
          Length = 316

 Score =  627 bits (1616), Expect = e-180
 Identities = 316/316 (100%), Positives = 316/316 (100%)

Query: 1   MEQAYQLLAWRSGRVVGSLEKTRKLVLRPALAVGVTAVLSVAGILNAAQPPAVKTVEVPI 60
           MEQAYQLLAWRSGRVVGSLEKTRKLVLRPALAVGVTAVLSVAGILNAAQPPAVKTVEVPI
Sbjct: 1   MEQAYQLLAWRSGRVVGSLEKTRKLVLRPALAVGVTAVLSVAGILNAAQPPAVKTVEVPI 60

Query: 61  HQLPASMNNLKIVLLSDIHLGPTVGRTKMEMFVRMVNVLEPDITVIVGDLSDSEASVLRT 120
           HQLPASMNNLKIVLLSDIHLGPTVGRTKMEMFVRMVNVLEPDITVIVGDLSDSEASVLRT
Sbjct: 61  HQLPASMNNLKIVLLSDIHLGPTVGRTKMEMFVRMVNVLEPDITVIVGDLSDSEASVLRT 120

Query: 121 AVAPLGQLHSHLGAYFVTGNHEYYTSDVSNWFALLESLHVQPLHNENVKISATRAQRGGG 180
           AVAPLGQLHSHLGAYFVTGNHEYYTSDVSNWFALLESLHVQPLHNENVKISATRAQRGGG
Sbjct: 121 AVAPLGQLHSHLGAYFVTGNHEYYTSDVSNWFALLESLHVQPLHNENVKISATRAQRGGG 180

Query: 181 GSGSGSEDEDWICLAGVDDIEADILHYSGHGMDLDKALEGCSPDHTIILLAHQPLAAKRA 240
           GSGSGSEDEDWICLAGVDDIEADILHYSGHGMDLDKALEGCSPDHTIILLAHQPLAAKRA
Sbjct: 181 GSGSGSEDEDWICLAGVDDIEADILHYSGHGMDLDKALEGCSPDHTIILLAHQPLAAKRA 240

Query: 241 LQARPDINLILSGHTHAGQIFPLNVAAYLLNPFFAGLYQVAQATFVYVSPGTAYYGIPMR 300
           LQARPDINLILSGHTHAGQIFPLNVAAYLLNPFFAGLYQVAQATFVYVSPGTAYYGIPMR
Sbjct: 241 LQARPDINLILSGHTHAGQIFPLNVAAYLLNPFFAGLYQVAQATFVYVSPGTAYYGIPMR 300

Query: 301 LGSRAEITELILQRSP 316
           LGSRAEITELILQRSP
Sbjct: 301 LGSRAEITELILQRSP 316


>gi|210031196 transmembrane protein with metallophosphoesterase
           domain isoform 1 [Homo sapiens]
          Length = 453

 Score =  627 bits (1616), Expect = e-180
 Identities = 316/316 (100%), Positives = 316/316 (100%)

Query: 1   MEQAYQLLAWRSGRVVGSLEKTRKLVLRPALAVGVTAVLSVAGILNAAQPPAVKTVEVPI 60
           MEQAYQLLAWRSGRVVGSLEKTRKLVLRPALAVGVTAVLSVAGILNAAQPPAVKTVEVPI
Sbjct: 138 MEQAYQLLAWRSGRVVGSLEKTRKLVLRPALAVGVTAVLSVAGILNAAQPPAVKTVEVPI 197

Query: 61  HQLPASMNNLKIVLLSDIHLGPTVGRTKMEMFVRMVNVLEPDITVIVGDLSDSEASVLRT 120
           HQLPASMNNLKIVLLSDIHLGPTVGRTKMEMFVRMVNVLEPDITVIVGDLSDSEASVLRT
Sbjct: 198 HQLPASMNNLKIVLLSDIHLGPTVGRTKMEMFVRMVNVLEPDITVIVGDLSDSEASVLRT 257

Query: 121 AVAPLGQLHSHLGAYFVTGNHEYYTSDVSNWFALLESLHVQPLHNENVKISATRAQRGGG 180
           AVAPLGQLHSHLGAYFVTGNHEYYTSDVSNWFALLESLHVQPLHNENVKISATRAQRGGG
Sbjct: 258 AVAPLGQLHSHLGAYFVTGNHEYYTSDVSNWFALLESLHVQPLHNENVKISATRAQRGGG 317

Query: 181 GSGSGSEDEDWICLAGVDDIEADILHYSGHGMDLDKALEGCSPDHTIILLAHQPLAAKRA 240
           GSGSGSEDEDWICLAGVDDIEADILHYSGHGMDLDKALEGCSPDHTIILLAHQPLAAKRA
Sbjct: 318 GSGSGSEDEDWICLAGVDDIEADILHYSGHGMDLDKALEGCSPDHTIILLAHQPLAAKRA 377

Query: 241 LQARPDINLILSGHTHAGQIFPLNVAAYLLNPFFAGLYQVAQATFVYVSPGTAYYGIPMR 300
           LQARPDINLILSGHTHAGQIFPLNVAAYLLNPFFAGLYQVAQATFVYVSPGTAYYGIPMR
Sbjct: 378 LQARPDINLILSGHTHAGQIFPLNVAAYLLNPFFAGLYQVAQATFVYVSPGTAYYGIPMR 437

Query: 301 LGSRAEITELILQRSP 316
           LGSRAEITELILQRSP
Sbjct: 438 LGSRAEITELILQRSP 453


>gi|17017963 forkhead box P2 isoform I [Homo sapiens]
          Length = 715

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 17/70 (24%), Positives = 28/70 (40%)

Query: 10  WRSGRVVGSLEKTRKLVLRPALAVGVTAVLSVAGILNAAQPPAVKTVEVPIHQLPASMNN 69
           W    V     +++K+   P L   +   L     LNA+   A+    +P+   P  +NN
Sbjct: 573 WTVDEVEYQKRRSQKITGSPTLVKNIPTSLGYGAALNASLQAALAESSLPLLSNPGLINN 632

Query: 70  LKIVLLSDIH 79
               LL  +H
Sbjct: 633 ASSGLLQAVH 642


>gi|22538413 forkhead box P2 isoform III [Homo sapiens]
          Length = 623

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 17/70 (24%), Positives = 28/70 (40%)

Query: 10  WRSGRVVGSLEKTRKLVLRPALAVGVTAVLSVAGILNAAQPPAVKTVEVPIHQLPASMNN 69
           W    V     +++K+   P L   +   L     LNA+   A+    +P+   P  +NN
Sbjct: 481 WTVDEVEYQKRRSQKITGSPTLVKNIPTSLGYGAALNASLQAALAESSLPLLSNPGLINN 540

Query: 70  LKIVLLSDIH 79
               LL  +H
Sbjct: 541 ASSGLLQAVH 550


>gi|149999352 forkhead box P2 isoform II [Homo sapiens]
          Length = 740

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 17/70 (24%), Positives = 28/70 (40%)

Query: 10  WRSGRVVGSLEKTRKLVLRPALAVGVTAVLSVAGILNAAQPPAVKTVEVPIHQLPASMNN 69
           W    V     +++K+   P L   +   L     LNA+   A+    +P+   P  +NN
Sbjct: 598 WTVDEVEYQKRRSQKITGSPTLVKNIPTSLGYGAALNASLQAALAESSLPLLSNPGLINN 657

Query: 70  LKIVLLSDIH 79
               LL  +H
Sbjct: 658 ASSGLLQAVH 667


>gi|30581111 minor histocompatibility antigen 13 isoform 3 [Homo
           sapiens]
          Length = 426

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 3/77 (3%)

Query: 240 ALQARPDINLILSGHTHAGQIFPLNVAAYLLNPFFAGLYQVAQATFVYVSPGTAYYGIPM 299
           AL  R DI+L  + HT+    F   +    L  F   +++ AQ   +Y+ P  A  G P+
Sbjct: 274 ALLLRFDISLKKNTHTYFYTSFAAYIFGLGLTIFIMHIFKHAQPALLYLVP--ACIGFPV 331

Query: 300 RLG-SRAEITELILQRS 315
            +  ++ E+TE+    S
Sbjct: 332 LVALAKGEVTEMFSYES 348


>gi|30581109 minor histocompatibility antigen 13 isoform 2 [Homo
           sapiens]
          Length = 394

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 3/77 (3%)

Query: 240 ALQARPDINLILSGHTHAGQIFPLNVAAYLLNPFFAGLYQVAQATFVYVSPGTAYYGIPM 299
           AL  R DI+L  + HT+    F   +    L  F   +++ AQ   +Y+ P  A  G P+
Sbjct: 274 ALLLRFDISLKKNTHTYFYTSFAAYIFGLGLTIFIMHIFKHAQPALLYLVP--ACIGFPV 331

Query: 300 RLG-SRAEITELILQRS 315
            +  ++ E+TE+    S
Sbjct: 332 LVALAKGEVTEMFSYES 348


>gi|7706441 vacuolar protein sorting 29 isoform 1 [Homo sapiens]
          Length = 182

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 13/52 (25%), Positives = 25/52 (48%)

Query: 235 LAAKRALQARPDINLILSGHTHAGQIFPLNVAAYLLNPFFAGLYQVAQATFV 286
           +A+   LQ + D+++++SGHTH  + F      Y+      G Y   +   +
Sbjct: 96  MASLALLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGAYNALETNII 147


>gi|17402912 vacuolar protein sorting 29 isoform 2 [Homo sapiens]
          Length = 186

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 13/52 (25%), Positives = 25/52 (48%)

Query: 235 LAAKRALQARPDINLILSGHTHAGQIFPLNVAAYLLNPFFAGLYQVAQATFV 286
           +A+   LQ + D+++++SGHTH  + F      Y+      G Y   +   +
Sbjct: 100 MASLALLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGAYNALETNII 151


>gi|6631100 natural killer-tumor recognition sequence [Homo sapiens]
          Length = 1462

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 15/64 (23%), Positives = 28/64 (43%)

Query: 188  DEDWICLAGVDDIEADILHYSGHGMDLDKALEGCSPDHTIILLAHQPLAAKRALQARPDI 247
            +E+  CL  +  +E  + +     +  D  +E C+PD +      +      A    PDI
Sbjct: 1099 EENVACLQNIQHVEESVPNGVEDVLQTDDNMEICTPDRSSPAKVEETSPLGNARLDTPDI 1158

Query: 248  NLIL 251
            N++L
Sbjct: 1159 NIVL 1162


>gi|40254834 kinesin family member 1C [Homo sapiens]
          Length = 1103

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 2/74 (2%)

Query: 173 TRAQRGGGGSGSGSEDEDWICLAGVDDIEADILHYSGHGMDLDKALEGCSPDHTIILLAH 232
           T  +  GGG+GSG   E+    A V+D+ A I   +G   ++   L+  S D  +  L  
Sbjct: 806 TVGEEEGGGAGSGGGSEEGARGAEVEDLRAHIDKLTGILQEV--KLQNSSKDRELQALRD 863

Query: 233 QPLAAKRALQARPD 246
           + L  +R +    D
Sbjct: 864 RMLRMERVIPLAQD 877


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.135    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,563,070
Number of Sequences: 37866
Number of extensions: 501499
Number of successful extensions: 1500
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1488
Number of HSP's gapped (non-prelim): 11
length of query: 316
length of database: 18,247,518
effective HSP length: 102
effective length of query: 214
effective length of database: 14,385,186
effective search space: 3078429804
effective search space used: 3078429804
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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