BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|210031210 transmembrane protein with metallophosphoesterase domain isoform 2 [Homo sapiens] (316 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|210031210 transmembrane protein with metallophosphoesterase d... 627 e-180 gi|210031196 transmembrane protein with metallophosphoesterase d... 627 e-180 gi|17017963 forkhead box P2 isoform I [Homo sapiens] 30 2.8 gi|22538413 forkhead box P2 isoform III [Homo sapiens] 30 2.8 gi|149999352 forkhead box P2 isoform II [Homo sapiens] 30 2.8 gi|30581111 minor histocompatibility antigen 13 isoform 3 [Homo ... 28 8.2 gi|30581109 minor histocompatibility antigen 13 isoform 2 [Homo ... 28 8.2 gi|7706441 vacuolar protein sorting 29 isoform 1 [Homo sapiens] 28 8.2 gi|17402912 vacuolar protein sorting 29 isoform 2 [Homo sapiens] 28 8.2 gi|6631100 natural killer-tumor recognition sequence [Homo sapiens] 28 8.2 gi|40254834 kinesin family member 1C [Homo sapiens] 28 8.2 >gi|210031210 transmembrane protein with metallophosphoesterase domain isoform 2 [Homo sapiens] Length = 316 Score = 627 bits (1616), Expect = e-180 Identities = 316/316 (100%), Positives = 316/316 (100%) Query: 1 MEQAYQLLAWRSGRVVGSLEKTRKLVLRPALAVGVTAVLSVAGILNAAQPPAVKTVEVPI 60 MEQAYQLLAWRSGRVVGSLEKTRKLVLRPALAVGVTAVLSVAGILNAAQPPAVKTVEVPI Sbjct: 1 MEQAYQLLAWRSGRVVGSLEKTRKLVLRPALAVGVTAVLSVAGILNAAQPPAVKTVEVPI 60 Query: 61 HQLPASMNNLKIVLLSDIHLGPTVGRTKMEMFVRMVNVLEPDITVIVGDLSDSEASVLRT 120 HQLPASMNNLKIVLLSDIHLGPTVGRTKMEMFVRMVNVLEPDITVIVGDLSDSEASVLRT Sbjct: 61 HQLPASMNNLKIVLLSDIHLGPTVGRTKMEMFVRMVNVLEPDITVIVGDLSDSEASVLRT 120 Query: 121 AVAPLGQLHSHLGAYFVTGNHEYYTSDVSNWFALLESLHVQPLHNENVKISATRAQRGGG 180 AVAPLGQLHSHLGAYFVTGNHEYYTSDVSNWFALLESLHVQPLHNENVKISATRAQRGGG Sbjct: 121 AVAPLGQLHSHLGAYFVTGNHEYYTSDVSNWFALLESLHVQPLHNENVKISATRAQRGGG 180 Query: 181 GSGSGSEDEDWICLAGVDDIEADILHYSGHGMDLDKALEGCSPDHTIILLAHQPLAAKRA 240 GSGSGSEDEDWICLAGVDDIEADILHYSGHGMDLDKALEGCSPDHTIILLAHQPLAAKRA Sbjct: 181 GSGSGSEDEDWICLAGVDDIEADILHYSGHGMDLDKALEGCSPDHTIILLAHQPLAAKRA 240 Query: 241 LQARPDINLILSGHTHAGQIFPLNVAAYLLNPFFAGLYQVAQATFVYVSPGTAYYGIPMR 300 LQARPDINLILSGHTHAGQIFPLNVAAYLLNPFFAGLYQVAQATFVYVSPGTAYYGIPMR Sbjct: 241 LQARPDINLILSGHTHAGQIFPLNVAAYLLNPFFAGLYQVAQATFVYVSPGTAYYGIPMR 300 Query: 301 LGSRAEITELILQRSP 316 LGSRAEITELILQRSP Sbjct: 301 LGSRAEITELILQRSP 316 >gi|210031196 transmembrane protein with metallophosphoesterase domain isoform 1 [Homo sapiens] Length = 453 Score = 627 bits (1616), Expect = e-180 Identities = 316/316 (100%), Positives = 316/316 (100%) Query: 1 MEQAYQLLAWRSGRVVGSLEKTRKLVLRPALAVGVTAVLSVAGILNAAQPPAVKTVEVPI 60 MEQAYQLLAWRSGRVVGSLEKTRKLVLRPALAVGVTAVLSVAGILNAAQPPAVKTVEVPI Sbjct: 138 MEQAYQLLAWRSGRVVGSLEKTRKLVLRPALAVGVTAVLSVAGILNAAQPPAVKTVEVPI 197 Query: 61 HQLPASMNNLKIVLLSDIHLGPTVGRTKMEMFVRMVNVLEPDITVIVGDLSDSEASVLRT 120 HQLPASMNNLKIVLLSDIHLGPTVGRTKMEMFVRMVNVLEPDITVIVGDLSDSEASVLRT Sbjct: 198 HQLPASMNNLKIVLLSDIHLGPTVGRTKMEMFVRMVNVLEPDITVIVGDLSDSEASVLRT 257 Query: 121 AVAPLGQLHSHLGAYFVTGNHEYYTSDVSNWFALLESLHVQPLHNENVKISATRAQRGGG 180 AVAPLGQLHSHLGAYFVTGNHEYYTSDVSNWFALLESLHVQPLHNENVKISATRAQRGGG Sbjct: 258 AVAPLGQLHSHLGAYFVTGNHEYYTSDVSNWFALLESLHVQPLHNENVKISATRAQRGGG 317 Query: 181 GSGSGSEDEDWICLAGVDDIEADILHYSGHGMDLDKALEGCSPDHTIILLAHQPLAAKRA 240 GSGSGSEDEDWICLAGVDDIEADILHYSGHGMDLDKALEGCSPDHTIILLAHQPLAAKRA Sbjct: 318 GSGSGSEDEDWICLAGVDDIEADILHYSGHGMDLDKALEGCSPDHTIILLAHQPLAAKRA 377 Query: 241 LQARPDINLILSGHTHAGQIFPLNVAAYLLNPFFAGLYQVAQATFVYVSPGTAYYGIPMR 300 LQARPDINLILSGHTHAGQIFPLNVAAYLLNPFFAGLYQVAQATFVYVSPGTAYYGIPMR Sbjct: 378 LQARPDINLILSGHTHAGQIFPLNVAAYLLNPFFAGLYQVAQATFVYVSPGTAYYGIPMR 437 Query: 301 LGSRAEITELILQRSP 316 LGSRAEITELILQRSP Sbjct: 438 LGSRAEITELILQRSP 453 >gi|17017963 forkhead box P2 isoform I [Homo sapiens] Length = 715 Score = 30.0 bits (66), Expect = 2.8 Identities = 17/70 (24%), Positives = 28/70 (40%) Query: 10 WRSGRVVGSLEKTRKLVLRPALAVGVTAVLSVAGILNAAQPPAVKTVEVPIHQLPASMNN 69 W V +++K+ P L + L LNA+ A+ +P+ P +NN Sbjct: 573 WTVDEVEYQKRRSQKITGSPTLVKNIPTSLGYGAALNASLQAALAESSLPLLSNPGLINN 632 Query: 70 LKIVLLSDIH 79 LL +H Sbjct: 633 ASSGLLQAVH 642 >gi|22538413 forkhead box P2 isoform III [Homo sapiens] Length = 623 Score = 30.0 bits (66), Expect = 2.8 Identities = 17/70 (24%), Positives = 28/70 (40%) Query: 10 WRSGRVVGSLEKTRKLVLRPALAVGVTAVLSVAGILNAAQPPAVKTVEVPIHQLPASMNN 69 W V +++K+ P L + L LNA+ A+ +P+ P +NN Sbjct: 481 WTVDEVEYQKRRSQKITGSPTLVKNIPTSLGYGAALNASLQAALAESSLPLLSNPGLINN 540 Query: 70 LKIVLLSDIH 79 LL +H Sbjct: 541 ASSGLLQAVH 550 >gi|149999352 forkhead box P2 isoform II [Homo sapiens] Length = 740 Score = 30.0 bits (66), Expect = 2.8 Identities = 17/70 (24%), Positives = 28/70 (40%) Query: 10 WRSGRVVGSLEKTRKLVLRPALAVGVTAVLSVAGILNAAQPPAVKTVEVPIHQLPASMNN 69 W V +++K+ P L + L LNA+ A+ +P+ P +NN Sbjct: 598 WTVDEVEYQKRRSQKITGSPTLVKNIPTSLGYGAALNASLQAALAESSLPLLSNPGLINN 657 Query: 70 LKIVLLSDIH 79 LL +H Sbjct: 658 ASSGLLQAVH 667 >gi|30581111 minor histocompatibility antigen 13 isoform 3 [Homo sapiens] Length = 426 Score = 28.5 bits (62), Expect = 8.2 Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 3/77 (3%) Query: 240 ALQARPDINLILSGHTHAGQIFPLNVAAYLLNPFFAGLYQVAQATFVYVSPGTAYYGIPM 299 AL R DI+L + HT+ F + L F +++ AQ +Y+ P A G P+ Sbjct: 274 ALLLRFDISLKKNTHTYFYTSFAAYIFGLGLTIFIMHIFKHAQPALLYLVP--ACIGFPV 331 Query: 300 RLG-SRAEITELILQRS 315 + ++ E+TE+ S Sbjct: 332 LVALAKGEVTEMFSYES 348 >gi|30581109 minor histocompatibility antigen 13 isoform 2 [Homo sapiens] Length = 394 Score = 28.5 bits (62), Expect = 8.2 Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 3/77 (3%) Query: 240 ALQARPDINLILSGHTHAGQIFPLNVAAYLLNPFFAGLYQVAQATFVYVSPGTAYYGIPM 299 AL R DI+L + HT+ F + L F +++ AQ +Y+ P A G P+ Sbjct: 274 ALLLRFDISLKKNTHTYFYTSFAAYIFGLGLTIFIMHIFKHAQPALLYLVP--ACIGFPV 331 Query: 300 RLG-SRAEITELILQRS 315 + ++ E+TE+ S Sbjct: 332 LVALAKGEVTEMFSYES 348 >gi|7706441 vacuolar protein sorting 29 isoform 1 [Homo sapiens] Length = 182 Score = 28.5 bits (62), Expect = 8.2 Identities = 13/52 (25%), Positives = 25/52 (48%) Query: 235 LAAKRALQARPDINLILSGHTHAGQIFPLNVAAYLLNPFFAGLYQVAQATFV 286 +A+ LQ + D+++++SGHTH + F Y+ G Y + + Sbjct: 96 MASLALLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGAYNALETNII 147 >gi|17402912 vacuolar protein sorting 29 isoform 2 [Homo sapiens] Length = 186 Score = 28.5 bits (62), Expect = 8.2 Identities = 13/52 (25%), Positives = 25/52 (48%) Query: 235 LAAKRALQARPDINLILSGHTHAGQIFPLNVAAYLLNPFFAGLYQVAQATFV 286 +A+ LQ + D+++++SGHTH + F Y+ G Y + + Sbjct: 100 MASLALLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGAYNALETNII 151 >gi|6631100 natural killer-tumor recognition sequence [Homo sapiens] Length = 1462 Score = 28.5 bits (62), Expect = 8.2 Identities = 15/64 (23%), Positives = 28/64 (43%) Query: 188 DEDWICLAGVDDIEADILHYSGHGMDLDKALEGCSPDHTIILLAHQPLAAKRALQARPDI 247 +E+ CL + +E + + + D +E C+PD + + A PDI Sbjct: 1099 EENVACLQNIQHVEESVPNGVEDVLQTDDNMEICTPDRSSPAKVEETSPLGNARLDTPDI 1158 Query: 248 NLIL 251 N++L Sbjct: 1159 NIVL 1162 >gi|40254834 kinesin family member 1C [Homo sapiens] Length = 1103 Score = 28.5 bits (62), Expect = 8.2 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 2/74 (2%) Query: 173 TRAQRGGGGSGSGSEDEDWICLAGVDDIEADILHYSGHGMDLDKALEGCSPDHTIILLAH 232 T + GGG+GSG E+ A V+D+ A I +G ++ L+ S D + L Sbjct: 806 TVGEEEGGGAGSGGGSEEGARGAEVEDLRAHIDKLTGILQEV--KLQNSSKDRELQALRD 863 Query: 233 QPLAAKRALQARPD 246 + L +R + D Sbjct: 864 RMLRMERVIPLAQD 877 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.319 0.135 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,563,070 Number of Sequences: 37866 Number of extensions: 501499 Number of successful extensions: 1500 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 1488 Number of HSP's gapped (non-prelim): 11 length of query: 316 length of database: 18,247,518 effective HSP length: 102 effective length of query: 214 effective length of database: 14,385,186 effective search space: 3078429804 effective search space used: 3078429804 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.