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Search of human proteins with 209863022
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|209863022 uridine-cytidine kinase 1 isoform b [Homo sapiens]
(201 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|209863022 uridine-cytidine kinase 1 isoform b [Homo sapiens] 417 e-117
gi|13899253 uridine-cytidine kinase 1 isoform a [Homo sapiens] 340 4e-94
gi|18699734 uridine-cytidine kinase 2 [Homo sapiens] 238 3e-63
gi|57863312 uridine-cytidine kinase 1-like 1 [Homo sapiens] 144 7e-35
gi|8923530 nicotinamide riboside kinase 1 isoform 1 [Homo sapiens] 35 0.033
gi|189027124 nicotinamide riboside kinase 1 isoform 2 [Homo sapi... 34 0.073
gi|46048234 nucleolar protein 8 [Homo sapiens] 32 0.36
gi|19743898 receptor tyrosine kinase-like orphan receptor 2 prec... 30 1.1
gi|209915597 UMP-CMP kinase 1 isoform b [Homo sapiens] 30 1.8
gi|191252797 dephospho-CoA kinase domain containing [Homo sapiens] 30 1.8
gi|191252795 dephospho-CoA kinase domain containing [Homo sapiens] 30 1.8
gi|4502011 adenylate kinase 1 [Homo sapiens] 29 3.1
gi|24762248 integrin beta 1 binding protein 3 [Homo sapiens] 29 3.1
gi|28144897 adenylate kinase 5 isoform 1 [Homo sapiens] 29 3.1
gi|28144899 adenylate kinase 5 isoform 2 [Homo sapiens] 29 3.1
gi|7706497 UMP-CMP kinase 1 isoform a [Homo sapiens] 28 5.2
gi|195539337 S-adenosylhomocysteine hydrolase-like 2 isoform b [... 28 6.9
gi|24308043 S-adenosylhomocysteine hydrolase-like 2 isoform a [H... 28 6.9
gi|148491106 zinc finger protein 295 isoform S [Homo sapiens] 28 6.9
gi|148491088 zinc finger protein 295 isoform L [Homo sapiens] 28 6.9
gi|50345873 zinc finger protein 295 isoform L [Homo sapiens] 28 6.9
gi|224586884 cold shock domain protein A isoform b [Homo sapiens] 27 9.0
gi|224586882 cold shock domain protein A isoform a [Homo sapiens] 27 9.0
>gi|209863022 uridine-cytidine kinase 1 isoform b [Homo sapiens]
Length = 201
Score = 417 bits (1071), Expect = e-117
Identities = 201/201 (100%), Positives = 201/201 (100%)
Query: 1 MASAGGEDCESPAPEADRPHQRPFLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKVV 60
MASAGGEDCESPAPEADRPHQRPFLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKVV
Sbjct: 1 MASAGGEDCESPAPEADRPHQRPFLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKVV 60
Query: 61 ILSQDRFYKVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIVEGKTVEVPTYDFVTH 120
ILSQDRFYKVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIVEGKTVEVPTYDFVTH
Sbjct: 61 ILSQDRFYKVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIVEGKTVEVPTYDFVTH 120
Query: 121 SRLPETTVVYPADVVLFEGILVFYSQEIRDMFHLRLFVDTDSDVRLSRRDKEVCRCDHPA 180
SRLPETTVVYPADVVLFEGILVFYSQEIRDMFHLRLFVDTDSDVRLSRRDKEVCRCDHPA
Sbjct: 121 SRLPETTVVYPADVVLFEGILVFYSQEIRDMFHLRLFVDTDSDVRLSRRDKEVCRCDHPA 180
Query: 181 RSGQYGCHQPDRAAHPGHSEW 201
RSGQYGCHQPDRAAHPGHSEW
Sbjct: 181 RSGQYGCHQPDRAAHPGHSEW 201
>gi|13899253 uridine-cytidine kinase 1 isoform a [Homo sapiens]
Length = 277
Score = 340 bits (873), Expect = 4e-94
Identities = 169/169 (100%), Positives = 169/169 (100%)
Query: 1 MASAGGEDCESPAPEADRPHQRPFLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKVV 60
MASAGGEDCESPAPEADRPHQRPFLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKVV
Sbjct: 1 MASAGGEDCESPAPEADRPHQRPFLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKVV 60
Query: 61 ILSQDRFYKVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIVEGKTVEVPTYDFVTH 120
ILSQDRFYKVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIVEGKTVEVPTYDFVTH
Sbjct: 61 ILSQDRFYKVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIVEGKTVEVPTYDFVTH 120
Query: 121 SRLPETTVVYPADVVLFEGILVFYSQEIRDMFHLRLFVDTDSDVRLSRR 169
SRLPETTVVYPADVVLFEGILVFYSQEIRDMFHLRLFVDTDSDVRLSRR
Sbjct: 121 SRLPETTVVYPADVVLFEGILVFYSQEIRDMFHLRLFVDTDSDVRLSRR 169
>gi|18699734 uridine-cytidine kinase 2 [Homo sapiens]
Length = 261
Score = 238 bits (607), Expect = 3e-63
Identities = 113/147 (76%), Positives = 133/147 (90%)
Query: 23 PFLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKVVILSQDRFYKVLTAEQKAKALKG 82
PFLIGVSGGTASGKS+VC KI++LLGQNEV+ RQ++VVILSQD FY+VLT+EQKAKALKG
Sbjct: 20 PFLIGVSGGTASGKSSVCAKIVQLLGQNEVDYRQKQVVILSQDSFYRVLTSEQKAKALKG 79
Query: 83 QYNFDHPDAFDNDLMHRTLKNIVEGKTVEVPTYDFVTHSRLPETTVVYPADVVLFEGILV 142
Q+NFDHPDAFDN+L+ +TLK I EGKTV++P YDFV+HSR ET VYPADVVLFEGIL
Sbjct: 80 QFNFDHPDAFDNELILKTLKEITEGKTVQIPVYDFVSHSRKEETVTVYPADVVLFEGILA 139
Query: 143 FYSQEIRDMFHLRLFVDTDSDVRLSRR 169
FYSQE+RD+F ++LFVDTD+D RLSRR
Sbjct: 140 FYSQEVRDLFQMKLFVDTDADTRLSRR 166
>gi|57863312 uridine-cytidine kinase 1-like 1 [Homo sapiens]
Length = 548
Score = 144 bits (362), Expect = 7e-35
Identities = 72/146 (49%), Positives = 100/146 (68%), Gaps = 7/146 (4%)
Query: 24 FLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKVVILSQDRFYKVLTAEQKAKALKGQ 83
F IG+ GG+ASGK+TV I+E L V V+LS D FYKVLT +Q+ +A
Sbjct: 99 FAIGLGGGSASGKTTVARMIIEALDVPWV-------VLLSMDSFYKVLTEQQQEQAAHNN 151
Query: 84 YNFDHPDAFDNDLMHRTLKNIVEGKTVEVPTYDFVTHSRLPETTVVYPADVVLFEGILVF 143
+NFDHPDAFD DL+ TLK + +GK+V+VP YDF THSR + +Y A+V++FEGI+ F
Sbjct: 152 FNFDHPDAFDFDLIISTLKKLKQGKSVKVPIYDFTTHSRKKDWKTLYGANVIIFEGIMAF 211
Query: 144 YSQEIRDMFHLRLFVDTDSDVRLSRR 169
+ + ++ +++FVDTDSD+RL RR
Sbjct: 212 ADKTLLELLDMKIFVDTDSDIRLVRR 237
>gi|8923530 nicotinamide riboside kinase 1 isoform 1 [Homo sapiens]
Length = 199
Score = 35.4 bits (80), Expect = 0.033
Identities = 34/152 (22%), Positives = 66/152 (43%), Gaps = 20/152 (13%)
Query: 22 RPFLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKVVILSQDRFYKVLTAEQKAKALK 81
+ F+IG+SG T SGK+T+ + + + L V +SQD F+K + + K
Sbjct: 2 KTFIIGISGVTNSGKTTLAKNLQKHLPNCSV---------ISQDDFFKPESEIETDK--N 50
Query: 82 GQYNFDHPDAFDNDLMHRTLKNIVEGKTVEVPTYDFVTHSRLPETTVVYPADVVLFEGIL 141
G +D +A + + M + +E V + D + +P +++ EG L
Sbjct: 51 GFLQYDVLEALNMEKMMSAISCWMESARHSVVSTDQESAEEIP---------ILIIEGFL 101
Query: 142 VFYSQEIRDMFHLRLFVDTDSDVRLSRRDKEV 173
+F + + +++ F+ + RR V
Sbjct: 102 LFNYKPLDTIWNRSYFLTIPYEECKRRRSTRV 133
>gi|189027124 nicotinamide riboside kinase 1 isoform 2 [Homo
sapiens]
Length = 175
Score = 34.3 bits (77), Expect = 0.073
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 20/122 (16%)
Query: 22 RPFLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKVVILSQDRFYKVLTAEQKAKALK 81
+ F+IG+SG T SGK+T+ + + + L V +SQD F+K + + K
Sbjct: 2 KTFIIGISGVTNSGKTTLAKNLQKHLPNCSV---------ISQDDFFKPESEIETDK--N 50
Query: 82 GQYNFDHPDAFDNDLMHRTLKNIVEGKTVEVPTYDFVTHSRLPETTVVYPADVVLFEGIL 141
G +D +A + + M + +E V + D + +P +++ EG L
Sbjct: 51 GFLQYDVLEALNMEKMMSAISCWMESARHSVVSTDQESAEEIP---------ILIIEGFL 101
Query: 142 VF 143
+F
Sbjct: 102 LF 103
>gi|46048234 nucleolar protein 8 [Homo sapiens]
Length = 1167
Score = 32.0 bits (71), Expect = 0.36
Identities = 24/99 (24%), Positives = 45/99 (45%), Gaps = 16/99 (16%)
Query: 20 HQRPFLIGVSGGT-----ASGKSTVCEKIMELLGQNEVEQRQRKVVILSQDRFYKVLTAE 74
H+ P +I + G+ + G+ T C+ + G N ++ ++R+ SQDR ++
Sbjct: 605 HEDPSIISMEDGSPYVNGSLGEVTPCQHAKKANGPNYIQPQKRQTTFESQDRKAVSPSSS 664
Query: 75 QK------AKALKGQYNFD-----HPDAFDNDLMHRTLK 102
+K ++ L+G+ + H FD D H T K
Sbjct: 665 EKRSKNPISRPLEGKKSLSLSAKTHNIGFDKDSCHSTTK 703
>gi|19743898 receptor tyrosine kinase-like orphan receptor 2
precursor [Homo sapiens]
Length = 943
Score = 30.4 bits (67), Expect = 1.1
Identities = 26/92 (28%), Positives = 41/92 (44%)
Query: 44 MELLGQNEVEQRQRKVVILSQDRFYKVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKN 103
ME+ N+ +Q + K + LS RF + L ++ K KG P + +TLK+
Sbjct: 452 MEMPLINQHKQAKLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKD 511
Query: 104 IVEGKTVEVPTYDFVTHSRLPETTVVYPADVV 135
EG E ++ + +RL VV VV
Sbjct: 512 KAEGPLREEFRHEAMLRARLQHPNVVCLLGVV 543
>gi|209915597 UMP-CMP kinase 1 isoform b [Homo sapiens]
Length = 179
Score = 29.6 bits (65), Expect = 1.8
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 22 RPFLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKVVIL 62
+P ++ V GG +GK T C +I+E + Q Q+ ++
Sbjct: 34 KPLVVFVLGGPGAGKGTQCARIVEEMDQTMAANAQKNKFLI 74
>gi|191252797 dephospho-CoA kinase domain containing [Homo
sapiens]
Length = 231
Score = 29.6 bits (65), Expect = 1.8
Identities = 12/23 (52%), Positives = 18/23 (78%)
Query: 24 FLIGVSGGTASGKSTVCEKIMEL 46
FL+G++GG ASGKS+V + +L
Sbjct: 2 FLVGLTGGIASGKSSVIQVFQQL 24
>gi|191252795 dephospho-CoA kinase domain containing [Homo
sapiens]
Length = 231
Score = 29.6 bits (65), Expect = 1.8
Identities = 12/23 (52%), Positives = 18/23 (78%)
Query: 24 FLIGVSGGTASGKSTVCEKIMEL 46
FL+G++GG ASGKS+V + +L
Sbjct: 2 FLVGLTGGIASGKSSVIQVFQQL 24
>gi|4502011 adenylate kinase 1 [Homo sapiens]
Length = 194
Score = 28.9 bits (63), Expect = 3.1
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 25 LIGVSGGTASGKSTVCEKIMELLG 48
+I V GG SGK T CEKI++ G
Sbjct: 10 IIFVVGGPGSGKGTQCEKIVQKYG 33
>gi|24762248 integrin beta 1 binding protein 3 [Homo sapiens]
Length = 230
Score = 28.9 bits (63), Expect = 3.1
Identities = 26/134 (19%), Positives = 55/134 (41%), Gaps = 17/134 (12%)
Query: 25 LIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKVVILSQDRFYKVLTAEQKAKALKGQY 84
++G+ G T GK+T+ ++ L ++ QD F+K +Q A G
Sbjct: 4 IVGIGGMTNGGKTTLTNSLLRAL---------PNCCVIHQDDFFK--PQDQIAVGEDGFK 52
Query: 85 NFDHPDAFDNDLMHRTLKNIVEGKTVEVPTYDFVTHSRLPETTVVYPADVVLFEGILVFY 144
+D ++ D + M T++ + + +T ++L EG L++
Sbjct: 53 QWDVLESLDMEAMLDTVQAWLSSPQKFARAHGVSVQPEASDT------HILLLEGFLLYS 106
Query: 145 SQEIRDMFHLRLFV 158
+ + D++ R F+
Sbjct: 107 YKPLVDLYSRRYFL 120
>gi|28144897 adenylate kinase 5 isoform 1 [Homo sapiens]
Length = 562
Score = 28.9 bits (63), Expect = 3.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 25 LIGVSGGTASGKSTVCEKIMELLG 48
+I + GG SGK T CEK++E G
Sbjct: 378 IIFIIGGPGSGKGTQCEKLVEKYG 401
>gi|28144899 adenylate kinase 5 isoform 2 [Homo sapiens]
Length = 536
Score = 28.9 bits (63), Expect = 3.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 25 LIGVSGGTASGKSTVCEKIMELLG 48
+I + GG SGK T CEK++E G
Sbjct: 352 IIFIIGGPGSGKGTQCEKLVEKYG 375
>gi|7706497 UMP-CMP kinase 1 isoform a [Homo sapiens]
Length = 228
Score = 28.1 bits (61), Expect = 5.2
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 22 RPFLIGVSGGTASGKSTVCEKIMELLG 48
+P ++ V GG +GK T C +I+E G
Sbjct: 34 KPLVVFVLGGPGAGKGTQCARIVEKYG 60
>gi|195539337 S-adenosylhomocysteine hydrolase-like 2 isoform b
[Homo sapiens]
Length = 610
Score = 27.7 bits (60), Expect = 6.9
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Query: 4 AGGEDCESPAPEADRPHQRPFLIGVSGGTASGKSTVCEKI 43
AGG D E+PAP A+RP + G G A+ S K+
Sbjct: 45 AGGGDPEAPAPAAERPP----VPGPGSGPAAALSPAAGKV 80
>gi|24308043 S-adenosylhomocysteine hydrolase-like 2 isoform a
[Homo sapiens]
Length = 611
Score = 27.7 bits (60), Expect = 6.9
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Query: 4 AGGEDCESPAPEADRPHQRPFLIGVSGGTASGKSTVCEKI 43
AGG D E+PAP A+RP + G G A+ S K+
Sbjct: 45 AGGGDPEAPAPAAERPP----VPGPGSGPAAALSPAAGKV 80
>gi|148491106 zinc finger protein 295 isoform S [Homo sapiens]
Length = 865
Score = 27.7 bits (60), Expect = 6.9
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 36 KSTVCEKIMELLGQNEVEQRQRKVVILSQDRFYKVLTAEQKAKALKGQYNFDHPDAFDND 95
K +C+ ++ ++G + + + V+ S + F + T ++ Q +F PDAFDN
Sbjct: 26 KGQLCDVLL-IVGDQKF-RAHKNVLAASSEYFQSLFTNKENESQTVFQLDFCEPDAFDNV 83
Query: 96 L 96
L
Sbjct: 84 L 84
>gi|148491088 zinc finger protein 295 isoform L [Homo sapiens]
Length = 1066
Score = 27.7 bits (60), Expect = 6.9
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 36 KSTVCEKIMELLGQNEVEQRQRKVVILSQDRFYKVLTAEQKAKALKGQYNFDHPDAFDND 95
K +C+ ++ ++G + + + V+ S + F + T ++ Q +F PDAFDN
Sbjct: 26 KGQLCDVLL-IVGDQKF-RAHKNVLAASSEYFQSLFTNKENESQTVFQLDFCEPDAFDNV 83
Query: 96 L 96
L
Sbjct: 84 L 84
>gi|50345873 zinc finger protein 295 isoform L [Homo sapiens]
Length = 1066
Score = 27.7 bits (60), Expect = 6.9
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 36 KSTVCEKIMELLGQNEVEQRQRKVVILSQDRFYKVLTAEQKAKALKGQYNFDHPDAFDND 95
K +C+ ++ ++G + + + V+ S + F + T ++ Q +F PDAFDN
Sbjct: 26 KGQLCDVLL-IVGDQKF-RAHKNVLAASSEYFQSLFTNKENESQTVFQLDFCEPDAFDNV 83
Query: 96 L 96
L
Sbjct: 84 L 84
>gi|224586884 cold shock domain protein A isoform b [Homo sapiens]
Length = 303
Score = 27.3 bits (59), Expect = 9.0
Identities = 30/133 (22%), Positives = 53/133 (39%), Gaps = 7/133 (5%)
Query: 11 SPAPEADRPHQRPFLIGVSGGTASGKST---VCEKIMELLGQNEVEQRQRKVVILSQDRF 67
S AP+A P + G GG A+ +T + G + E++ +L ++
Sbjct: 38 SGAPQAAAPAPAAHVAGNPGGDAAPAATGTAAAASLATAAGSEDAEKKVLATKVLGTVKW 97
Query: 68 YKVLTAEQKAKALKGQYN-FDHPDAFDNDLMHRTLKNIVEGKTVEVPTYDFVTHSRLPET 126
+ V + + F H A + + L+++ +G+TVE +D V + E
Sbjct: 98 FNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVE---FDVVEGEKGAEA 154
Query: 127 TVVYPADVVLFEG 139
V D V EG
Sbjct: 155 ANVTGPDGVPVEG 167
>gi|224586882 cold shock domain protein A isoform a [Homo sapiens]
Length = 372
Score = 27.3 bits (59), Expect = 9.0
Identities = 30/133 (22%), Positives = 53/133 (39%), Gaps = 7/133 (5%)
Query: 11 SPAPEADRPHQRPFLIGVSGGTASGKST---VCEKIMELLGQNEVEQRQRKVVILSQDRF 67
S AP+A P + G GG A+ +T + G + E++ +L ++
Sbjct: 38 SGAPQAAAPAPAAHVAGNPGGDAAPAATGTAAAASLATAAGSEDAEKKVLATKVLGTVKW 97
Query: 68 YKVLTAEQKAKALKGQYN-FDHPDAFDNDLMHRTLKNIVEGKTVEVPTYDFVTHSRLPET 126
+ V + + F H A + + L+++ +G+TVE +D V + E
Sbjct: 98 FNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVE---FDVVEGEKGAEA 154
Query: 127 TVVYPADVVLFEG 139
V D V EG
Sbjct: 155 ANVTGPDGVPVEG 167
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,298,776
Number of Sequences: 37866
Number of extensions: 343329
Number of successful extensions: 923
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 905
Number of HSP's gapped (non-prelim): 25
length of query: 201
length of database: 18,247,518
effective HSP length: 97
effective length of query: 104
effective length of database: 14,574,516
effective search space: 1515749664
effective search space used: 1515749664
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.