BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|209862743 tetratricopeptide repeat domain 39C isoform 1 [Homo sapiens] (583 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|209862743 tetratricopeptide repeat domain 39C isoform 1 [Homo... 1163 0.0 gi|116256462 tetratricopeptide repeat domain 39C isoform 2 [Homo... 1044 0.0 gi|22749191 tetratricopeptide repeat domain 39B [Homo sapiens] 199 4e-51 gi|221307588 tetratricopeptide repeat domain 39A isoform 1 [Homo... 171 2e-42 gi|122937436 tetratricopeptide repeat domain 39A isoform 2 [Homo... 168 1e-41 gi|148529023 hypothetical protein LOC23172 [Homo sapiens] 34 0.32 gi|217416374 hypothetical protein LOC92749 [Homo sapiens] 33 0.95 gi|210147462 von Willebrand factor A domain containing 5B1 [Homo... 32 1.2 gi|218563749 ArfGAP with coiled-coil, ankyrin repeat and PH doma... 30 4.7 gi|4506519 regulator of G-protein signalling 5 [Homo sapiens] 30 6.1 gi|51477723 testis expressed sequence 11 isoform 2 [Homo sapiens] 30 6.1 gi|51477721 testis expressed sequence 11 isoform 1 [Homo sapiens] 30 6.1 gi|239755530 PREDICTED: similar to hCG2036644 [Homo sapiens] 30 6.1 gi|239750002 PREDICTED: hypothetical protein XP_002347250 [Homo ... 30 6.1 gi|239744313 PREDICTED: hypothetical protein XP_002343115 [Homo ... 30 6.1 gi|19424126 diamine N-acetyltransferase 2 [Homo sapiens] 30 6.1 gi|156119621 inhibitor of DNA binding 3 [Homo sapiens] 30 6.1 >gi|209862743 tetratricopeptide repeat domain 39C isoform 1 [Homo sapiens] Length = 583 Score = 1163 bits (3009), Expect = 0.0 Identities = 583/583 (100%), Positives = 583/583 (100%) Query: 1 MAGSEQQRPRRRDDGDSDAAAAAAAPLQDAELALAGINMLLNNGFRESDQLFKQYRNHSP 60 MAGSEQQRPRRRDDGDSDAAAAAAAPLQDAELALAGINMLLNNGFRESDQLFKQYRNHSP Sbjct: 1 MAGSEQQRPRRRDDGDSDAAAAAAAPLQDAELALAGINMLLNNGFRESDQLFKQYRNHSP 60 Query: 61 LMSFGASFVSFLNAMMTFEEEKMQLACDDLKTTEKLCESEEAGVIETIKNKIKKNVDVRK 120 LMSFGASFVSFLNAMMTFEEEKMQLACDDLKTTEKLCESEEAGVIETIKNKIKKNVDVRK Sbjct: 61 LMSFGASFVSFLNAMMTFEEEKMQLACDDLKTTEKLCESEEAGVIETIKNKIKKNVDVRK 120 Query: 121 SAPSMVDRLQRQIIIADCQVYLAVLSFVKQELSAYIKGGWILRKAWKIYNKCYLDINALQ 180 SAPSMVDRLQRQIIIADCQVYLAVLSFVKQELSAYIKGGWILRKAWKIYNKCYLDINALQ Sbjct: 121 SAPSMVDRLQRQIIIADCQVYLAVLSFVKQELSAYIKGGWILRKAWKIYNKCYLDINALQ 180 Query: 181 ELYQKKLTEESLTSDAANDNHIVAEGVSEESLNRLKGAVSFGYGLFHLCISMVPPNLLKI 240 ELYQKKLTEESLTSDAANDNHIVAEGVSEESLNRLKGAVSFGYGLFHLCISMVPPNLLKI Sbjct: 181 ELYQKKLTEESLTSDAANDNHIVAEGVSEESLNRLKGAVSFGYGLFHLCISMVPPNLLKI 240 Query: 241 INLLGFPGDRLQGLSSLMYASESKDMKAPLATLALLWYHTVVRPFFALDGSDNKAGLDEA 300 INLLGFPGDRLQGLSSLMYASESKDMKAPLATLALLWYHTVVRPFFALDGSDNKAGLDEA Sbjct: 241 INLLGFPGDRLQGLSSLMYASESKDMKAPLATLALLWYHTVVRPFFALDGSDNKAGLDEA 300 Query: 301 KEILLKKEAAYPNSSLFMFFKGRIQRLECQINSALTSFHTALELAVDQREIQHVCLYEIG 360 KEILLKKEAAYPNSSLFMFFKGRIQRLECQINSALTSFHTALELAVDQREIQHVCLYEIG Sbjct: 301 KEILLKKEAAYPNSSLFMFFKGRIQRLECQINSALTSFHTALELAVDQREIQHVCLYEIG 360 Query: 361 WCSMIELNFKDAFDSFERLKNESRWSQCYYAYLTAVCQGATGDVDGAQIVFKEVQKLFKR 420 WCSMIELNFKDAFDSFERLKNESRWSQCYYAYLTAVCQGATGDVDGAQIVFKEVQKLFKR Sbjct: 361 WCSMIELNFKDAFDSFERLKNESRWSQCYYAYLTAVCQGATGDVDGAQIVFKEVQKLFKR 420 Query: 421 KNNQIEQFSVKKAERFRKQTPTKALCVLASIEVLYLWKALPNCSFPNLQRMSQACHEVDD 480 KNNQIEQFSVKKAERFRKQTPTKALCVLASIEVLYLWKALPNCSFPNLQRMSQACHEVDD Sbjct: 421 KNNQIEQFSVKKAERFRKQTPTKALCVLASIEVLYLWKALPNCSFPNLQRMSQACHEVDD 480 Query: 481 SSVVGLKYLLLGAIHKCLGNSEDAVQYFQRAVKDELCRQNNLYVQPYACYELGCLLLDKP 540 SSVVGLKYLLLGAIHKCLGNSEDAVQYFQRAVKDELCRQNNLYVQPYACYELGCLLLDKP Sbjct: 481 SSVVGLKYLLLGAIHKCLGNSEDAVQYFQRAVKDELCRQNNLYVQPYACYELGCLLLDKP 540 Query: 541 ETVGRGRALLLQAKEDFSGYDFENRLHVRIHAALASLRELVPQ 583 ETVGRGRALLLQAKEDFSGYDFENRLHVRIHAALASLRELVPQ Sbjct: 541 ETVGRGRALLLQAKEDFSGYDFENRLHVRIHAALASLRELVPQ 583 >gi|116256462 tetratricopeptide repeat domain 39C isoform 2 [Homo sapiens] Length = 522 Score = 1044 bits (2700), Expect = 0.0 Identities = 522/522 (100%), Positives = 522/522 (100%) Query: 62 MSFGASFVSFLNAMMTFEEEKMQLACDDLKTTEKLCESEEAGVIETIKNKIKKNVDVRKS 121 MSFGASFVSFLNAMMTFEEEKMQLACDDLKTTEKLCESEEAGVIETIKNKIKKNVDVRKS Sbjct: 1 MSFGASFVSFLNAMMTFEEEKMQLACDDLKTTEKLCESEEAGVIETIKNKIKKNVDVRKS 60 Query: 122 APSMVDRLQRQIIIADCQVYLAVLSFVKQELSAYIKGGWILRKAWKIYNKCYLDINALQE 181 APSMVDRLQRQIIIADCQVYLAVLSFVKQELSAYIKGGWILRKAWKIYNKCYLDINALQE Sbjct: 61 APSMVDRLQRQIIIADCQVYLAVLSFVKQELSAYIKGGWILRKAWKIYNKCYLDINALQE 120 Query: 182 LYQKKLTEESLTSDAANDNHIVAEGVSEESLNRLKGAVSFGYGLFHLCISMVPPNLLKII 241 LYQKKLTEESLTSDAANDNHIVAEGVSEESLNRLKGAVSFGYGLFHLCISMVPPNLLKII Sbjct: 121 LYQKKLTEESLTSDAANDNHIVAEGVSEESLNRLKGAVSFGYGLFHLCISMVPPNLLKII 180 Query: 242 NLLGFPGDRLQGLSSLMYASESKDMKAPLATLALLWYHTVVRPFFALDGSDNKAGLDEAK 301 NLLGFPGDRLQGLSSLMYASESKDMKAPLATLALLWYHTVVRPFFALDGSDNKAGLDEAK Sbjct: 181 NLLGFPGDRLQGLSSLMYASESKDMKAPLATLALLWYHTVVRPFFALDGSDNKAGLDEAK 240 Query: 302 EILLKKEAAYPNSSLFMFFKGRIQRLECQINSALTSFHTALELAVDQREIQHVCLYEIGW 361 EILLKKEAAYPNSSLFMFFKGRIQRLECQINSALTSFHTALELAVDQREIQHVCLYEIGW Sbjct: 241 EILLKKEAAYPNSSLFMFFKGRIQRLECQINSALTSFHTALELAVDQREIQHVCLYEIGW 300 Query: 362 CSMIELNFKDAFDSFERLKNESRWSQCYYAYLTAVCQGATGDVDGAQIVFKEVQKLFKRK 421 CSMIELNFKDAFDSFERLKNESRWSQCYYAYLTAVCQGATGDVDGAQIVFKEVQKLFKRK Sbjct: 301 CSMIELNFKDAFDSFERLKNESRWSQCYYAYLTAVCQGATGDVDGAQIVFKEVQKLFKRK 360 Query: 422 NNQIEQFSVKKAERFRKQTPTKALCVLASIEVLYLWKALPNCSFPNLQRMSQACHEVDDS 481 NNQIEQFSVKKAERFRKQTPTKALCVLASIEVLYLWKALPNCSFPNLQRMSQACHEVDDS Sbjct: 361 NNQIEQFSVKKAERFRKQTPTKALCVLASIEVLYLWKALPNCSFPNLQRMSQACHEVDDS 420 Query: 482 SVVGLKYLLLGAIHKCLGNSEDAVQYFQRAVKDELCRQNNLYVQPYACYELGCLLLDKPE 541 SVVGLKYLLLGAIHKCLGNSEDAVQYFQRAVKDELCRQNNLYVQPYACYELGCLLLDKPE Sbjct: 421 SVVGLKYLLLGAIHKCLGNSEDAVQYFQRAVKDELCRQNNLYVQPYACYELGCLLLDKPE 480 Query: 542 TVGRGRALLLQAKEDFSGYDFENRLHVRIHAALASLRELVPQ 583 TVGRGRALLLQAKEDFSGYDFENRLHVRIHAALASLRELVPQ Sbjct: 481 TVGRGRALLLQAKEDFSGYDFENRLHVRIHAALASLRELVPQ 522 >gi|22749191 tetratricopeptide repeat domain 39B [Homo sapiens] Length = 616 Score = 199 bits (507), Expect = 4e-51 Identities = 147/598 (24%), Positives = 275/598 (45%), Gaps = 64/598 (10%) Query: 6 QQRPRRRDDGDSDAAAAAAAPLQDA-ELALAGINMLLNNGFRESDQLFKQYRNHSPLMSF 64 QQ PR+R ++++ L+ E +N+ L+N F ++ +L + + S + Sbjct: 45 QQAPRQRGASTVSSSSSTKVDLKSGLEECAVALNLFLSNKFTDALELLRPWAKESMYHAL 104 Query: 65 GASFVSFLNAMMTFEEEKMQLACDDLKTTEKLCES--EEAGVIETIKNKIKKNVDVRKSA 122 G S + L A++TFE++ +Q +K + C+ ++ V+E+ + + + + S Sbjct: 105 GYSTIVVLQAVLTFEQQDIQNGISAMKDALQTCQKYRKKYTVVESFSSLLSRGSLEQLSE 164 Query: 123 PSMVDRLQRQIIIADCQVYLAVLSFVKQE-LSAYIKGGWILRKAWKIYNKCYLDINALQE 181 M +I A+C + A L+FV+ E + +IKGG +R +++IY +C ++ L E Sbjct: 165 EEM----HAEICYAECLLQKAALTFVQDENMINFIKGGLKIRTSYQIYKEC---LSILHE 217 Query: 182 LYQKKLTEESLTSDAANDNHIVAEGVSEESLNRLKGAVSFGYGLFHLCISMVPPNLLKII 241 + + KL +E +G V G G F+L +S++P +++++ Sbjct: 218 IQKNKL--------------------QQEFFYEFEGGVKLGSGAFNLMLSLLPARIIRLL 257 Query: 242 NLLGFPGDRLQGLSSLMYASESKDMKAPLATLALLWYHTVVRPFFALDGSDNKAGLDEAK 301 +GF G+R GL L + + M++ L L +L +HT + +L + + EA+ Sbjct: 258 EFIGFSGNRELGLLQLREGASGRSMRSALCCLTILAFHT----YISLILGTGEVNVAEAE 313 Query: 302 EILLKKEAAYPNSSLFMFFKGRIQRLECQINSALTSFHTALELAVDQREIQHVCLYEIGW 361 +L +PN SL +F+ RI+ L+ + A F + + + ++ H+C +E+ W Sbjct: 314 RLLAPFLQQFPNGSLVLFYHARIELLKGNLEEAQEVFQKCVSVQEEWKQFHHLCYWELMW 373 Query: 362 CSMIELNFKDAFDSFERLKNESRWSQCYYAYLTAVCQGATGDVD------GAQIVFKEVQ 415 ++ + N+ A+ + L ES+WS+ Y +L A + D +F++V Sbjct: 374 INVFQQNWMQAYYYSDLLCKESKWSKATYVFLKAAILSMLPEEDVVATNENVVTLFRQVD 433 Query: 416 KLFKR---KNNQIEQFSVKKAERFRKQTPTKALCVLASIEVLYLWKALPNCSFPN----- 467 L +R K+ E+F+V+KA R+ P +L ++E++Y+W S Sbjct: 434 SLKQRIAGKSIPTEKFAVRKARRYSASLPAPVKLILPALEMMYVWNGFSIVSKRKDLSEN 493 Query: 468 -----------LQRMSQACHEVDDSSVVGLKYLLLGAIHKCLGNSEDAVQYFQRAVKDEL 516 LQ + VDD +V LL G K L A + V+ E Sbjct: 494 LLVTVEKAEAALQSQNFNSFSVDDECLV---KLLKGCCLKNLQRPLQAELCYNHVVESEK 550 Query: 517 CRQNNLYVQPYACYELGCLLLDKPETVGRGRALLLQAKEDFSGYDFENRLHVRIHAAL 574 + + Y+ P+ +EL L + E + + L A+ ++ Y E+RLH RI AAL Sbjct: 551 LLKYDHYLVPFTLFELASLYKSQGE-IDKAIKFLETARNNYKDYSLESRLHFRIQAAL 607 >gi|221307588 tetratricopeptide repeat domain 39A isoform 1 [Homo sapiens] Length = 581 Score = 171 bits (432), Expect = 2e-42 Identities = 143/586 (24%), Positives = 265/586 (45%), Gaps = 65/586 (11%) Query: 15 GDSDAAAAAAAPLQDAELALAGINMLLNNGFRESDQLFKQYRNHSPLMSFGASFVSFLNA 74 G SD ++ + + + +++ L N F E+ K S S + + + A Sbjct: 13 GKSDRRTPESSLHEALDQCMTALDLFLTNQFSEALSYLKPRTKESMYHSLTYATILEMQA 72 Query: 75 MMTFEEEKMQLACDDLKTTEKLCESEEAGVIETIKNKIKKNVDVRKSAPSMVDRLQRQII 134 MMTF+ + + LA + +K + LC+ ++ + V+ + + ++ Sbjct: 73 MMTFDPQDILLAGNMMKEAQMLCQRHRRK--SSVTDSFSSLVNRPTLGQFTEEEIHAEVC 130 Query: 135 IADCQVYLAVLSFVKQE-LSAYIKGGWILRKAWKIYNKCYLDINALQELYQKKLTEESLT 193 A+C + A L+F++ E + ++IKGG +R +++ Y + LD Y K Sbjct: 131 YAECLLQRAALTFLQDENMVSFIKGGIKVRNSYQTYKE--LDSLVQSSQYCK-------- 180 Query: 194 SDAANDNHIVAEGVSEESLNRLKGAVSFGYGLFHLCISMVPPNLLKIINLLGFPGDRLQG 253 +NH +G V G G F+L +SM+P +L+++ +GF G++ G Sbjct: 181 ----GENH-----------PHFEGGVKLGVGAFNLTLSMLPTRILRLLEFVGFSGNKDYG 225 Query: 254 LSSLMYASESKDMKAPLATLALLWYHTVVRPFFALDGSDNKAGLDEAKEILLKKEAAYPN 313 L L + ++ L + LL YHT + F L G+ N ++EA+++L YP Sbjct: 226 LLQLEEGASGHSFRSVLCVMLLLCYHTFLT--FVL-GTGN-VNIEEAEKLLKPYLNRYPK 281 Query: 314 SSLFMFFKGRIQRLECQINSALTSFHTALELAVDQREIQHVCLYEIGWCSMIELNFKDAF 373 ++F+FF GRI+ ++ I++A+ F E ++ H+C +E+ WC + +K ++ Sbjct: 282 GAIFLFFAGRIEVIKGNIDAAIRRFEECCEAQQHWKQFHHMCYWELMWCFTYKGQWKMSY 341 Query: 374 DSFERLKNESRWSQCYYAYLTAVCQGATGDVDGAQIVFKEVQKLFKR----------KNN 423 + L E+ WS+ Y Y+ A G D EV+ LF+ K+ Sbjct: 342 FYADLLSKENCWSKATYIYMKAAYLSMFGKEDHKPFGDDEVE-LFRAVPGLKLKIAGKSL 400 Query: 424 QIEQFSVKKAERFRKQTPTKALCVLASIEVLYLWKAL------PNCSFPNLQRMSQA--- 474 E+F+++K+ R+ P + ++E++Y+W P + L+ +++A Sbjct: 401 PTEKFAIRKSRRYFSSNPIS--LPVPALEMMYIWNGYAVIGKQPKLTDGILEIITKAEEM 458 Query: 475 -------CHEVDDSSVVGLKYLLLGAIHKCLGNSEDAVQYFQRAVKDELCRQNNLYVQPY 527 + VDD +V LL G K LG ++A + F+ +E + + Y+ P Sbjct: 459 LEKGPENEYSVDDECLV---KLLKGLCLKYLGRVQEAEENFRSISANEKKIKYDHYLIPN 515 Query: 528 ACYELGCLLLDKPETVGRGRALLLQAKEDFSGYDFENRLHVRIHAA 573 A EL LL+++ LL AK+++ Y E+R H RI AA Sbjct: 516 ALLELALLLMEQDRN-EEAIKLLESAKQNYKNYSMESRTHFRIQAA 560 >gi|122937436 tetratricopeptide repeat domain 39A isoform 2 [Homo sapiens] Length = 578 Score = 168 bits (426), Expect = 1e-41 Identities = 140/567 (24%), Positives = 258/567 (45%), Gaps = 65/567 (11%) Query: 34 LAGINMLLNNGFRESDQLFKQYRNHSPLMSFGASFVSFLNAMMTFEEEKMQLACDDLKTT 93 + +++ L N F E+ K S S + + + AMMTF+ + + LA + +K Sbjct: 29 MTALDLFLTNQFSEALSYLKPRTKESMYHSLTYATILEMQAMMTFDPQDILLAGNMMKEA 88 Query: 94 EKLCESEEAGVIETIKNKIKKNVDVRKSAPSMVDRLQRQIIIADCQVYLAVLSFVKQE-L 152 + LC+ ++ + V+ + + ++ A+C + A L+F++ E + Sbjct: 89 QMLCQRHRRK--SSVTDSFSSLVNRPTLGQFTEEEIHAEVCYAECLLQRAALTFLQDENM 146 Query: 153 SAYIKGGWILRKAWKIYNKCYLDINALQELYQKKLTEESLTSDAANDNHIVAEGVSEESL 212 ++IKGG +R +++ Y + LD Y K +NH Sbjct: 147 VSFIKGGIKVRNSYQTYKE--LDSLVQSSQYCK------------GENH----------- 181 Query: 213 NRLKGAVSFGYGLFHLCISMVPPNLLKIINLLGFPGDRLQGLSSLMYASESKDMKAPLAT 272 +G V G G F+L +SM+P +L+++ +GF G++ GL L + ++ L Sbjct: 182 PHFEGGVKLGVGAFNLTLSMLPTRILRLLEFVGFSGNKDYGLLQLEEGASGHSFRSVLCV 241 Query: 273 LALLWYHTVVRPFFALDGSDNKAGLDEAKEILLKKEAAYPNSSLFMFFKGRIQRLECQIN 332 + LL YHT + F L G+ N ++EA+++L YP ++F+FF GRI+ ++ I+ Sbjct: 242 MLLLCYHTFLT--FVL-GTGN-VNIEEAEKLLKPYLNRYPKGAIFLFFAGRIEVIKGNID 297 Query: 333 SALTSFHTALELAVDQREIQHVCLYEIGWCSMIELNFKDAFDSFERLKNESRWSQCYYAY 392 +A+ F E ++ H+C +E+ WC + +K ++ + L E+ WS+ Y Y Sbjct: 298 AAIRRFEECCEAQQHWKQFHHMCYWELMWCFTYKGQWKMSYFYADLLSKENCWSKATYIY 357 Query: 393 LTAVCQGATGDVDGAQIVFKEVQKLFKR----------KNNQIEQFSVKKAERFRKQTPT 442 + A G D EV+ LF+ K+ E+F+++K+ R+ P Sbjct: 358 MKAAYLSMFGKEDHKPFGDDEVE-LFRAVPGLKLKIAGKSLPTEKFAIRKSRRYFSSNPI 416 Query: 443 KALCVLASIEVLYLWKAL------PNCSFPNLQRMSQA----------CHEVDDSSVVGL 486 + ++E++Y+W P + L+ +++A + VDD +V Sbjct: 417 S--LPVPALEMMYIWNGYAVIGKQPKLTDGILEIITKAEEMLEKGPENEYSVDDECLV-- 472 Query: 487 KYLLLGAIHKCLGNSEDAVQYFQRAVKDELCRQNNLYVQPYACYELGCLLLDKPETVGRG 546 LL G K LG ++A + F+ +E + + Y+ P A EL LL+++ Sbjct: 473 -KLLKGLCLKYLGRVQEAEENFRSISANEKKIKYDHYLIPNALLELALLLMEQDRN-EEA 530 Query: 547 RALLLQAKEDFSGYDFENRLHVRIHAA 573 LL AK+++ Y E+R H RI AA Sbjct: 531 IKLLESAKQNYKNYSMESRTHFRIQAA 557 >gi|148529023 hypothetical protein LOC23172 [Homo sapiens] Length = 415 Score = 34.3 bits (77), Expect = 0.32 Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 5/55 (9%) Query: 80 EEKMQLACDDLKTTEKLCESEEAGVIETIKNKIKKNVDVRKSAPSMVDRLQRQII 134 +EK+Q C D++ +E++ ES +A V NK+++ + RK+ RLQ+ ++ Sbjct: 217 QEKVQAVCADVEKSERVVESCQAEV-----NKLRRQITQRKNEKEQERRLQQAVL 266 >gi|217416374 hypothetical protein LOC92749 [Homo sapiens] Length = 740 Score = 32.7 bits (73), Expect = 0.95 Identities = 32/143 (22%), Positives = 59/143 (41%), Gaps = 22/143 (15%) Query: 73 NAMMTFEEEKMQLACDDLKTTEKLCESEEAGVIETIKNKIKKNVDVRKSAPSMVDRLQRQ 132 N FE E+ +L + K E+ ++ A +E + N++KK D K +L RQ Sbjct: 224 NIEKAFEVERQELLASNKKKWEQALQAHNAKELEYLNNRMKKVEDYEK-------QLNRQ 276 Query: 133 IIIADCQVYLAVLSFVKQELSAYIKGGWILRKAWKIYNKCYLDINALQELYQKKLTEESL 192 I DC+ Y + ++Q++ +I + A+ +L Q+KL Sbjct: 277 -RIWDCEEYNMIKIKLEQDV--------------QILEQQLQQRKAIYQLNQEKLEYNLQ 321 Query: 193 TSDAANDNHIVAEGVSEESLNRL 215 ++ V + + +NRL Sbjct: 322 VLKKRDEESTVIKSQQKRKINRL 344 >gi|210147462 von Willebrand factor A domain containing 5B1 [Homo sapiens] Length = 1215 Score = 32.3 bits (72), Expect = 1.2 Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 10/70 (14%) Query: 27 LQDAELALAGINMLLNNGFRESDQLFKQYRNHSP-----LMSFGASFVSFLNAMMTFEEE 81 L D +++GI+M R D + ++ P ++ FG++F S + T+ E+ Sbjct: 365 LIDRSSSMSGISM-----HRVKDAMLVALKSLMPACLFNIIGFGSTFKSLFPSSQTYSED 419 Query: 82 KMQLACDDLK 91 + +ACDD++ Sbjct: 420 SLAMACDDIQ 429 >gi|218563749 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3 [Homo sapiens] Length = 834 Score = 30.4 bits (67), Expect = 4.7 Identities = 29/126 (23%), Positives = 59/126 (46%), Gaps = 11/126 (8%) Query: 67 SFVSFLNAMMTFEEEKMQLACDDLKTTEKLCESEEAGVIETIKNKIKKNVDVRKSAPSMV 126 S +SF++A +F ++ L +KL + VI++ ++K RK A Sbjct: 189 SMLSFMHAQSSFFQQGYSLLHQLDPYMKKLAAELDQLVIDSA---VEKREMERKHAA--- 242 Query: 127 DRLQRQIIIADCQVYLAVLSFVKQELSAYIKGGWILRKA---WKIYNKCYLDINALQELY 183 +Q++ ++ D + + F S + G++ ++A +K +N+ + I Q +Y Sbjct: 243 --IQQRTLLQDFSYDESKVEFDVDAPSGVVMEGYLFKRASNAFKTWNRRWFSIQNSQLVY 300 Query: 184 QKKLTE 189 QKKL + Sbjct: 301 QKKLKD 306 >gi|4506519 regulator of G-protein signalling 5 [Homo sapiens] Length = 181 Score = 30.0 bits (66), Expect = 6.1 Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 7/81 (8%) Query: 41 LNNGFRESDQLFKQYRNHSPLMSFGASFVSFLNAMMTFEEEKMQLACDD---LKTTEKLC 97 L+ + D L K +N+ L ASF SFL + + E + +AC+D +K+ K+ Sbjct: 55 LDEALQWRDSLDKLLQNNYGL----ASFKSFLKSEFSEENLEFWIACEDYKKIKSPAKMA 110 Query: 98 ESEEAGVIETIKNKIKKNVDV 118 E + E I+ + K V++ Sbjct: 111 EKAKQIYEEFIQTEAPKEVNI 131 >gi|51477723 testis expressed sequence 11 isoform 2 [Homo sapiens] Length = 925 Score = 30.0 bits (66), Expect = 6.1 Identities = 28/132 (21%), Positives = 54/132 (40%), Gaps = 16/132 (12%) Query: 249 DRLQGLSSLMYASESKDMKAPLATLALLWYHTVVRPFFALDGSD---------------N 293 + + L ++++ + + T AL WY+ +R F++ D D N Sbjct: 396 ESMNWLHNILWRQAASSFEVQNYTDALQWYYYSLR-FYSTDEMDLDFTKLQRNMACCYLN 454 Query: 294 KAGLDEAKEILLKKEAAYPNSSLFMFFKGRIQRLECQINSALTSFHTALELAVDQREIQH 353 LD+AKE + + E P + F+ +I +E AL + T + D+ + Sbjct: 455 LQQLDKAKEAVAEAERHDPRNVFTQFYIFKIAVIEGNSERALQAIITLENILTDEESEDN 514 Query: 354 VCLYEIGWCSMI 365 + E G +M+ Sbjct: 515 DLVAERGSPTML 526 >gi|51477721 testis expressed sequence 11 isoform 1 [Homo sapiens] Length = 940 Score = 30.0 bits (66), Expect = 6.1 Identities = 28/132 (21%), Positives = 54/132 (40%), Gaps = 16/132 (12%) Query: 249 DRLQGLSSLMYASESKDMKAPLATLALLWYHTVVRPFFALDGSD---------------N 293 + + L ++++ + + T AL WY+ +R F++ D D N Sbjct: 411 ESMNWLHNILWRQAASSFEVQNYTDALQWYYYSLR-FYSTDEMDLDFTKLQRNMACCYLN 469 Query: 294 KAGLDEAKEILLKKEAAYPNSSLFMFFKGRIQRLECQINSALTSFHTALELAVDQREIQH 353 LD+AKE + + E P + F+ +I +E AL + T + D+ + Sbjct: 470 LQQLDKAKEAVAEAERHDPRNVFTQFYIFKIAVIEGNSERALQAIITLENILTDEESEDN 529 Query: 354 VCLYEIGWCSMI 365 + E G +M+ Sbjct: 530 DLVAERGSPTML 541 >gi|239755530 PREDICTED: similar to hCG2036644 [Homo sapiens] Length = 336 Score = 30.0 bits (66), Expect = 6.1 Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 4/76 (5%) Query: 155 YIKGGWI-LRKAWKIYNKCYLDINALQELYQKKLTEESLTSDAANDNHIVAEGVSEESLN 213 YI+G + L + K K Y +N + ++K+TE+ + S A ++H E VS ++ Sbjct: 51 YIQGVLLALYQRLKSAKKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVS-RLID 109 Query: 214 RLKGAVSFGYGLFHLC 229 L+ A+ G HLC Sbjct: 110 ELQTAIKSNIG--HLC 123 >gi|239750002 PREDICTED: hypothetical protein XP_002347250 [Homo sapiens] Length = 505 Score = 30.0 bits (66), Expect = 6.1 Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 4/76 (5%) Query: 155 YIKGGWI-LRKAWKIYNKCYLDINALQELYQKKLTEESLTSDAANDNHIVAEGVSEESLN 213 YI+G + L + K K Y +N + ++K+TE+ + S A ++H E VS ++ Sbjct: 51 YIQGVLLALYQRLKSAKKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVS-RLID 109 Query: 214 RLKGAVSFGYGLFHLC 229 L+ A+ G HLC Sbjct: 110 ELQTAIKSNIG--HLC 123 >gi|239744313 PREDICTED: hypothetical protein XP_002343115 [Homo sapiens] Length = 456 Score = 30.0 bits (66), Expect = 6.1 Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 4/76 (5%) Query: 155 YIKGGWI-LRKAWKIYNKCYLDINALQELYQKKLTEESLTSDAANDNHIVAEGVSEESLN 213 YI+G + L + K K Y +N + ++K+TE+ + S A ++H E VS ++ Sbjct: 2 YIQGVLLALYQRLKSAKKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVS-RLID 60 Query: 214 RLKGAVSFGYGLFHLC 229 L+ A+ G HLC Sbjct: 61 ELQTAIKSNIG--HLC 74 >gi|19424126 diamine N-acetyltransferase 2 [Homo sapiens] Length = 170 Score = 30.0 bits (66), Expect = 6.1 Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 2/75 (2%) Query: 184 QKKLTEESLTSDAANDNHIVAEGVSE--ESLNRLKGAVSFGYGLFHLCISMVPPNLLKII 241 Q K++EE+L +D DN V+E + +L G GYG+++ S + + Sbjct: 33 QVKISEEALRADGFGDNPFYHCLVAEILPAPGKLLGPCVVGYGIYYFIYSTWKGRTIYLE 92 Query: 242 NLLGFPGDRLQGLSS 256 ++ P R QG+ S Sbjct: 93 DIYVMPEYRGQGIGS 107 >gi|156119621 inhibitor of DNA binding 3 [Homo sapiens] Length = 119 Score = 30.0 bits (66), Expect = 6.1 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 7/54 (12%) Query: 529 CYELGCLLLDKPETVGRGRALLLQAKEDFSGYDFENRLHVRIHAALASLRELVP 582 CYE C L ++ + RGR A+E S D N + R LRELVP Sbjct: 10 CYEAVCCLSERSLAIARGRGKGPAAEEPLSLLDDMNHCYSR-------LRELVP 56 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.321 0.135 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,511,378 Number of Sequences: 37866 Number of extensions: 865634 Number of successful extensions: 2250 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 11 Number of HSP's that attempted gapping in prelim test: 2228 Number of HSP's gapped (non-prelim): 19 length of query: 583 length of database: 18,247,518 effective HSP length: 108 effective length of query: 475 effective length of database: 14,157,990 effective search space: 6725045250 effective search space used: 6725045250 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.