Search of human proteins with 208022658

Search of human proteins with 208022658

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|208022658 galactosidase, beta 1 isoform c preproprotein
[Homo sapiens]
         (546 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|208022658 galactosidase, beta 1 isoform c preproprotein [Homo...  1136   0.0  
gi|119372312 galactosidase, beta 1 isoform b [Homo sapiens]           910   0.0  
gi|119372308 galactosidase, beta 1 isoform a preproprotein [Homo...   910   0.0  
gi|40255043 galactosidase, beta 1-like [Homo sapiens]                 385   e-107
gi|31543093 galactosidase, beta 1-like 2 [Homo sapiens]               207   2e-53
gi|164519026 galactosidase, beta 1 like 3 [Homo sapiens]              171   2e-42
gi|169216514 PREDICTED: similar to paraneoplastic antigen MA2 [H...    30   7.4  
gi|169216749 PREDICTED: similar to Putative paraneoplastic antig...    30   7.4  
gi|82830424 gon-4-like isoform a [Homo sapiens]                        29   9.7  
gi|82830428 gon-4-like isoform b [Homo sapiens]                        29   9.7  

>gi|208022658 galactosidase, beta 1 isoform c preproprotein [Homo
           sapiens]
          Length = 546

 Score = 1136 bits (2938), Expect = 0.0
 Identities = 546/546 (100%), Positives = 546/546 (100%)

Query: 1   MPGFLVRILPLLLVLLLLGPTRGLRNATQRMFEIDYSRDSFLKDGQPFRYISGSIHYSRV 60
           MPGFLVRILPLLLVLLLLGPTRGLRNATQRMFEIDYSRDSFLKDGQPFRYISGSIHYSRV
Sbjct: 1   MPGFLVRILPLLLVLLLLGPTRGLRNATQRMFEIDYSRDSFLKDGQPFRYISGSIHYSRV 60

Query: 61  PRFYWKDRLLKMKMAGLNAIQTLPGSCGQVVGSPSAQDEASPLSEWRASYNSAGSNITDA 120
           PRFYWKDRLLKMKMAGLNAIQTLPGSCGQVVGSPSAQDEASPLSEWRASYNSAGSNITDA
Sbjct: 61  PRFYWKDRLLKMKMAGLNAIQTLPGSCGQVVGSPSAQDEASPLSEWRASYNSAGSNITDA 120

Query: 121 FLSQRKCEPKGPLINSEFYTGWLDHWGQPHSTIKTEAVASSLYDILARGASVNLYMFIGG 180
           FLSQRKCEPKGPLINSEFYTGWLDHWGQPHSTIKTEAVASSLYDILARGASVNLYMFIGG
Sbjct: 121 FLSQRKCEPKGPLINSEFYTGWLDHWGQPHSTIKTEAVASSLYDILARGASVNLYMFIGG 180

Query: 181 TNFAYWNGANSPYAAQPTSYDYDAPLSEAGDLTEKYFALRNIIQKFEKVPEGPIPPSTPK 240
           TNFAYWNGANSPYAAQPTSYDYDAPLSEAGDLTEKYFALRNIIQKFEKVPEGPIPPSTPK
Sbjct: 181 TNFAYWNGANSPYAAQPTSYDYDAPLSEAGDLTEKYFALRNIIQKFEKVPEGPIPPSTPK 240

Query: 241 FAYGKVTLEKLKTVGAALDILCPSGPIKSLYPLTFIQVKQHYGFVLYRTTLPQDCSNPAP 300
           FAYGKVTLEKLKTVGAALDILCPSGPIKSLYPLTFIQVKQHYGFVLYRTTLPQDCSNPAP
Sbjct: 241 FAYGKVTLEKLKTVGAALDILCPSGPIKSLYPLTFIQVKQHYGFVLYRTTLPQDCSNPAP 300

Query: 301 LSSPLNGVHDRAYVAVDGIPQGVLERNNVITLNITGKAGATLDLLVENMGRVNYGAYIND 360
           LSSPLNGVHDRAYVAVDGIPQGVLERNNVITLNITGKAGATLDLLVENMGRVNYGAYIND
Sbjct: 301 LSSPLNGVHDRAYVAVDGIPQGVLERNNVITLNITGKAGATLDLLVENMGRVNYGAYIND 360

Query: 361 FKGLVSNLTLSSNILTDWTIFPLDTEDAVRSHLGGWGHRDSGHHDEAWAHNSSNYTLPAF 420
           FKGLVSNLTLSSNILTDWTIFPLDTEDAVRSHLGGWGHRDSGHHDEAWAHNSSNYTLPAF
Sbjct: 361 FKGLVSNLTLSSNILTDWTIFPLDTEDAVRSHLGGWGHRDSGHHDEAWAHNSSNYTLPAF 420

Query: 421 YMGNFSIPSGIPDLPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQLTLFVPQHILMTS 480
           YMGNFSIPSGIPDLPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQLTLFVPQHILMTS
Sbjct: 421 YMGNFSIPSGIPDLPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQLTLFVPQHILMTS 480

Query: 481 APNTITVLELEWAPCSSDDPELCAVTFVDRPVIGSSVTYDHPSKPVEKRLMPPPPQKNKD 540
           APNTITVLELEWAPCSSDDPELCAVTFVDRPVIGSSVTYDHPSKPVEKRLMPPPPQKNKD
Sbjct: 481 APNTITVLELEWAPCSSDDPELCAVTFVDRPVIGSSVTYDHPSKPVEKRLMPPPPQKNKD 540

Query: 541 SWLDHV 546
           SWLDHV
Sbjct: 541 SWLDHV 546


>gi|119372312 galactosidase, beta 1 isoform b [Homo sapiens]
          Length = 647

 Score =  910 bits (2351), Expect = 0.0
 Identities = 433/433 (100%), Positives = 433/433 (100%)

Query: 114 GSNITDAFLSQRKCEPKGPLINSEFYTGWLDHWGQPHSTIKTEAVASSLYDILARGASVN 173
           GSNITDAFLSQRKCEPKGPLINSEFYTGWLDHWGQPHSTIKTEAVASSLYDILARGASVN
Sbjct: 215 GSNITDAFLSQRKCEPKGPLINSEFYTGWLDHWGQPHSTIKTEAVASSLYDILARGASVN 274

Query: 174 LYMFIGGTNFAYWNGANSPYAAQPTSYDYDAPLSEAGDLTEKYFALRNIIQKFEKVPEGP 233
           LYMFIGGTNFAYWNGANSPYAAQPTSYDYDAPLSEAGDLTEKYFALRNIIQKFEKVPEGP
Sbjct: 275 LYMFIGGTNFAYWNGANSPYAAQPTSYDYDAPLSEAGDLTEKYFALRNIIQKFEKVPEGP 334

Query: 234 IPPSTPKFAYGKVTLEKLKTVGAALDILCPSGPIKSLYPLTFIQVKQHYGFVLYRTTLPQ 293
           IPPSTPKFAYGKVTLEKLKTVGAALDILCPSGPIKSLYPLTFIQVKQHYGFVLYRTTLPQ
Sbjct: 335 IPPSTPKFAYGKVTLEKLKTVGAALDILCPSGPIKSLYPLTFIQVKQHYGFVLYRTTLPQ 394

Query: 294 DCSNPAPLSSPLNGVHDRAYVAVDGIPQGVLERNNVITLNITGKAGATLDLLVENMGRVN 353
           DCSNPAPLSSPLNGVHDRAYVAVDGIPQGVLERNNVITLNITGKAGATLDLLVENMGRVN
Sbjct: 395 DCSNPAPLSSPLNGVHDRAYVAVDGIPQGVLERNNVITLNITGKAGATLDLLVENMGRVN 454

Query: 354 YGAYINDFKGLVSNLTLSSNILTDWTIFPLDTEDAVRSHLGGWGHRDSGHHDEAWAHNSS 413
           YGAYINDFKGLVSNLTLSSNILTDWTIFPLDTEDAVRSHLGGWGHRDSGHHDEAWAHNSS
Sbjct: 455 YGAYINDFKGLVSNLTLSSNILTDWTIFPLDTEDAVRSHLGGWGHRDSGHHDEAWAHNSS 514

Query: 414 NYTLPAFYMGNFSIPSGIPDLPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQLTLFVP 473
           NYTLPAFYMGNFSIPSGIPDLPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQLTLFVP
Sbjct: 515 NYTLPAFYMGNFSIPSGIPDLPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQLTLFVP 574

Query: 474 QHILMTSAPNTITVLELEWAPCSSDDPELCAVTFVDRPVIGSSVTYDHPSKPVEKRLMPP 533
           QHILMTSAPNTITVLELEWAPCSSDDPELCAVTFVDRPVIGSSVTYDHPSKPVEKRLMPP
Sbjct: 575 QHILMTSAPNTITVLELEWAPCSSDDPELCAVTFVDRPVIGSSVTYDHPSKPVEKRLMPP 634

Query: 534 PPQKNKDSWLDHV 546
           PPQKNKDSWLDHV
Sbjct: 635 PPQKNKDSWLDHV 647



 Score =  111 bits (277), Expect = 2e-24
 Identities = 52/52 (100%), Positives = 52/52 (100%)

Query: 31 MFEIDYSRDSFLKDGQPFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQT 82
          MFEIDYSRDSFLKDGQPFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQT
Sbjct: 1  MFEIDYSRDSFLKDGQPFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQT 52


>gi|119372308 galactosidase, beta 1 isoform a preproprotein [Homo
           sapiens]
          Length = 677

 Score =  910 bits (2351), Expect = 0.0
 Identities = 433/433 (100%), Positives = 433/433 (100%)

Query: 114 GSNITDAFLSQRKCEPKGPLINSEFYTGWLDHWGQPHSTIKTEAVASSLYDILARGASVN 173
           GSNITDAFLSQRKCEPKGPLINSEFYTGWLDHWGQPHSTIKTEAVASSLYDILARGASVN
Sbjct: 245 GSNITDAFLSQRKCEPKGPLINSEFYTGWLDHWGQPHSTIKTEAVASSLYDILARGASVN 304

Query: 174 LYMFIGGTNFAYWNGANSPYAAQPTSYDYDAPLSEAGDLTEKYFALRNIIQKFEKVPEGP 233
           LYMFIGGTNFAYWNGANSPYAAQPTSYDYDAPLSEAGDLTEKYFALRNIIQKFEKVPEGP
Sbjct: 305 LYMFIGGTNFAYWNGANSPYAAQPTSYDYDAPLSEAGDLTEKYFALRNIIQKFEKVPEGP 364

Query: 234 IPPSTPKFAYGKVTLEKLKTVGAALDILCPSGPIKSLYPLTFIQVKQHYGFVLYRTTLPQ 293
           IPPSTPKFAYGKVTLEKLKTVGAALDILCPSGPIKSLYPLTFIQVKQHYGFVLYRTTLPQ
Sbjct: 365 IPPSTPKFAYGKVTLEKLKTVGAALDILCPSGPIKSLYPLTFIQVKQHYGFVLYRTTLPQ 424

Query: 294 DCSNPAPLSSPLNGVHDRAYVAVDGIPQGVLERNNVITLNITGKAGATLDLLVENMGRVN 353
           DCSNPAPLSSPLNGVHDRAYVAVDGIPQGVLERNNVITLNITGKAGATLDLLVENMGRVN
Sbjct: 425 DCSNPAPLSSPLNGVHDRAYVAVDGIPQGVLERNNVITLNITGKAGATLDLLVENMGRVN 484

Query: 354 YGAYINDFKGLVSNLTLSSNILTDWTIFPLDTEDAVRSHLGGWGHRDSGHHDEAWAHNSS 413
           YGAYINDFKGLVSNLTLSSNILTDWTIFPLDTEDAVRSHLGGWGHRDSGHHDEAWAHNSS
Sbjct: 485 YGAYINDFKGLVSNLTLSSNILTDWTIFPLDTEDAVRSHLGGWGHRDSGHHDEAWAHNSS 544

Query: 414 NYTLPAFYMGNFSIPSGIPDLPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQLTLFVP 473
           NYTLPAFYMGNFSIPSGIPDLPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQLTLFVP
Sbjct: 545 NYTLPAFYMGNFSIPSGIPDLPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQLTLFVP 604

Query: 474 QHILMTSAPNTITVLELEWAPCSSDDPELCAVTFVDRPVIGSSVTYDHPSKPVEKRLMPP 533
           QHILMTSAPNTITVLELEWAPCSSDDPELCAVTFVDRPVIGSSVTYDHPSKPVEKRLMPP
Sbjct: 605 QHILMTSAPNTITVLELEWAPCSSDDPELCAVTFVDRPVIGSSVTYDHPSKPVEKRLMPP 664

Query: 534 PPQKNKDSWLDHV 546
           PPQKNKDSWLDHV
Sbjct: 665 PPQKNKDSWLDHV 677



 Score =  167 bits (424), Expect = 2e-41
 Identities = 82/82 (100%), Positives = 82/82 (100%)

Query: 1  MPGFLVRILPLLLVLLLLGPTRGLRNATQRMFEIDYSRDSFLKDGQPFRYISGSIHYSRV 60
          MPGFLVRILPLLLVLLLLGPTRGLRNATQRMFEIDYSRDSFLKDGQPFRYISGSIHYSRV
Sbjct: 1  MPGFLVRILPLLLVLLLLGPTRGLRNATQRMFEIDYSRDSFLKDGQPFRYISGSIHYSRV 60

Query: 61 PRFYWKDRLLKMKMAGLNAIQT 82
          PRFYWKDRLLKMKMAGLNAIQT
Sbjct: 61 PRFYWKDRLLKMKMAGLNAIQT 82


>gi|40255043 galactosidase, beta 1-like [Homo sapiens]
          Length = 654

 Score =  385 bits (988), Expect = e-107
 Identities = 207/410 (50%), Positives = 260/410 (63%), Gaps = 30/410 (7%)

Query: 116 NITDAFLSQRKCEPKGPLINSEFYTGWLDHWGQPHSTIKTEAVASSLYDILARGASVNLY 175
           N+T  F   RK EP GPL+NSE+YTGWLD+WGQ HST    AV   L ++L  GASVN+Y
Sbjct: 243 NMTKIFTLLRKYEPHGPLVNSEYYTGWLDYWGQNHSTRSVSAVTKGLENMLKLGASVNMY 302

Query: 176 MFIGGTNFAYWNGANSPYAAQP--TSYDYDAPLSEAGDLTEKYFALRNIIQKFEKVPEGP 233
           MF GGTNF YWNGA+      P  TSYDYDAP+SEAGD T K FALR++I KF++VP GP
Sbjct: 303 MFHGGTNFGYWNGADKKGRFLPITTSYDYDAPISEAGDPTPKLFALRDVISKFQEVPLGP 362

Query: 234 IPPSTPKFAYGKVTLEKLKTVGAALDILCPSGPIKSLYPLTFIQVKQHYGFVLYRTTLPQ 293
           +PP +PK   G VTL  +  + A LD+LCP GPI S+ P+TF  VKQ +GF+LYRT +  
Sbjct: 363 LPPPSPKMMLGPVTLHLVGHLLAFLDLLCPRGPIHSILPMTFEAVKQDHGFMLYRTYMTH 422

Query: 294 DCSNPAPLSSPLNGVHDRAYVAVDGIPQGVLERNNVITLNITGKAGATLDLLVENMGRVN 353
               P P   P NGVHDRAYV VDG+ QGV+ERN    L +TGK G+ LD+LVENMGR++
Sbjct: 423 TIFEPTPFWVPNNGVHDRAYVMVDGVFQGVVERNMRDKLFLTGKLGSKLDILVENMGRLS 482

Query: 354 YGAYINDFKGLVSNLTLSSNILTDWTIFPLDTEDAVR----SHLGGWGHRDSGHHDEAWA 409
           +G+  +DFKGL+    L   ILT W +FPL  ++ V+      L  W +  +        
Sbjct: 483 FGSNSSDFKGLLKPPILGQTILTQWMMFPLKIDNLVKWWFPLQLPKWPYPQAP------- 535

Query: 410 HNSSNYTLPAFYMGNFSIPSGIPDLPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQLT 469
                 + P FY   F I   +     DTF+  PGWTKGQVWINGFNLGRYW  +GPQ T
Sbjct: 536 ------SGPTFYSKTFPILGSV----GDTFLYLPGWTKGQVWINGFNLGRYWTKQGPQQT 585

Query: 470 LFVPQHILM-TSAPNTITVLELEWAPCSSDDPELCAVTFVDRPVIGSSVT 518
           L+VP+ +L    A N IT+LELE      D P    V F+D+P++ S+ T
Sbjct: 586 LYVPRFLLFPRGALNKITLLELE------DVPLQPQVQFLDKPILNSTST 629



 Score = 83.6 bits (205), Expect = 4e-16
 Identities = 59/145 (40%), Positives = 69/145 (47%), Gaps = 27/145 (18%)

Query: 8   ILPLLLVLLLLGPTRGLRNATQRMFEIDYSRDSFLKDGQPFRYISGSIHYSRVPRFYWKD 67
           +LPL L LLL         A  R F +D   D FL DG PFRY+SGS+HY RVPR  W D
Sbjct: 13  LLPLSLTLLL-------PQADTRSFVVDRGHDRFLLDGAPFRYVSGSLHYFRVPRVLWAD 65

Query: 68  RLLKMKMAGLNAIQTLPGSCGQVVGSPSAQDEASPLSEWRASYNSAGSNITDAFLSQRKC 127
           RLLKM+ +GLNAIQ            P    E  P       YN  GS    AFL++   
Sbjct: 66  RLLKMRWSGLNAIQFY---------VPWNYHEPQP-----GVYNFNGSRDLIAFLNEAAL 111

Query: 128 E------PKGPLINSEFYTGWLDHW 146
                    GP I +E+  G L  W
Sbjct: 112 ANLLVILRPGPYICAEWEMGGLPSW 136


>gi|31543093 galactosidase, beta 1-like 2 [Homo sapiens]
          Length = 636

 Score =  207 bits (527), Expect = 2e-53
 Identities = 139/368 (37%), Positives = 192/368 (52%), Gaps = 36/368 (9%)

Query: 132 PLINSEFYTGWLDHWGQPHSTIKTEAVASSLYDILARGASVNLYMFIGGTNFAYWNGAN- 190
           P +  E++TGW D WG PH+ + +  V  ++  I+  G+S+NLYMF GGTNF + NGA  
Sbjct: 272 PKMVMEYWTGWFDSWGGPHNILDSSEVLKTVSAIVDAGSSINLYMFHGGTNFGFMNGAMH 331

Query: 191 -SPYAAQPTSYDYDAPLSEAGDLTEKYFALRNIIQKFEKVPEGPIPPSTPKFAYGKVTLE 249
              Y +  TSYDYDA L+EAGD T KY  LR+       +P  P P   PK  Y  +T  
Sbjct: 332 FHDYKSDVTSYDYDAVLTEAGDYTAKYMKLRDFFGSISGIPLPPPPDLLPKMPYEPLTPV 391

Query: 250 KLKTVGAALDILCPSGPIKSLYPLTFIQVK------QHYGFVLYRTTLPQDCSNPAPLSS 303
              ++  AL  L    PIKS  P+    +       Q +G++LY T++          S 
Sbjct: 392 LYLSLWDALKYL--GEPIKSEKPINMENLPVNGGNGQSFGYILYETSITS--------SG 441

Query: 304 PLNG-VHDRAYVAVDGIPQGVLERNNVITLNITGKAGATLDLLVENMGRVNYGAYIND-F 361
            L+G VHDR  V V+ +  G L+           +    L +LVEN GRVNYG  I+D  
Sbjct: 442 ILSGHVHDRGQVFVNTVSIGFLDYKTTKIAVPLIQGYTVLRILVENRGRVNYGENIDDQR 501

Query: 362 KGLVSNLTLSSNILTDWTIFPLDTEDAVRSHLGGWGHRDSGHHDEAWAHNSSNYTLPAFY 421
           KGL+ NL L+ + L ++ I+ LD + +     G           + W+      TLPAF+
Sbjct: 502 KGLIGNLYLNDSPLKNFRIYSLDMKKSFFQRFG----------LDKWSSLPETPTLPAFF 551

Query: 422 MGNFSIPSGIPDLPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQLTLFVPQHILMTSA 481
           +G+ SI S     P DTF++  GW KG V+ING NLGRYW   GPQ TL++P   L +S 
Sbjct: 552 LGSLSISS----TPCDTFLKLEGWEKGVVFINGQNLGRYWNI-GPQKTLYLPGPWL-SSG 605

Query: 482 PNTITVLE 489
            N + V E
Sbjct: 606 INQVIVFE 613



 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 24/43 (55%), Positives = 29/43 (67%)

Query: 40 SFLKDGQPFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQT 82
          +F+ +   F    GSIHY RVPR YW+DRLLKMK  GLN + T
Sbjct: 53 NFMLEDSTFWIFGGSIHYFRVPREYWRDRLLKMKACGLNTLTT 95


>gi|164519026 galactosidase, beta 1 like 3 [Homo sapiens]
          Length = 653

 Score =  171 bits (433), Expect = 2e-42
 Identities = 121/365 (33%), Positives = 173/365 (47%), Gaps = 35/365 (9%)

Query: 119 DAFLSQRKCEPKGPLINSEFYTGWLDHWGQPHSTIKTEAVASSLYDILARGASVNLYMFI 178
           D F    K +   PL+  E++ GW D WG  H     + V  ++ + +    S N+YMF 
Sbjct: 283 DTFNQLHKVQRDKPLLIMEYWVGWFDRWGDKHHVKDAKEVEHAVSEFIKYEISFNVYMFH 342

Query: 179 GGTNFAYWNGAN--SPYAAQPTSYDYDAPLSEAGDLTEKYFALRNIIQKFEKVPEGPIPP 236
           GGTNF + NGA     ++   TSYDYDA L+EAGD TEKY  L+ + Q     P   +P 
Sbjct: 343 GGTNFGFMNGATYFGKHSGIVTSYDYDAVLTEAGDYTEKYLKLQKLFQSVSATPLPRVPK 402

Query: 237 STPKFAYGKVTLEKLKTVGAALDILCPSGPIKSLYPLTFIQVK------QHYGFVLYRTT 290
             PK  Y  V       +  AL  L  + P++S  P+    +       Q YG VLY  +
Sbjct: 403 LPPKAVYPPVRPSLYLPLWDALSYL--NEPVRSRQPVNMENLPINNGSGQSYGLVLYEKS 460

Query: 291 LPQDCSNPAPLSSPLNGVHDRAYVAVDGIPQGVLERNNVITLNITGKAGATLDLLVENMG 350
           +   CS     +      HD A V +D    G+L  NN        +    L +LVEN G
Sbjct: 461 I---CSGGRLRAH----AHDVAQVFLDETMIGILNENNKDLHIPELRDCRYLRILVENQG 513

Query: 351 RVNYGAYI-NDFKGLVSNLTLSSNILTDWTIFPLDTEDAVRSHLGGWGHRDSGHHDEAWA 409
           RVN+   I N+ KG+  +++++++ L  +TI+ L+ + +    L              W 
Sbjct: 514 RVNFSWQIQNEQKGITGSVSINNSSLEGFTIYSLEMKMSFFERL----------RSATWK 563

Query: 410 HNSSNYTLPAFYMGNFSI-PSGIPDLPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQL 468
               ++  PAFY G     PS     P+DTF+    W  G V+ING NLGRYW   GPQ 
Sbjct: 564 PVPDSHQGPAFYCGTLKAGPS-----PKDTFLSLLNWNYGFVFINGRNLGRYWNI-GPQK 617

Query: 469 TLFVP 473
           TL++P
Sbjct: 618 TLYLP 622



 Score = 53.5 bits (127), Expect = 5e-07
 Identities = 23/42 (54%), Positives = 27/42 (64%)

Query: 41  FLKDGQPFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQT 82
           F  +G  F    GSIHY RVPR YW+DRLLK+K  G N + T
Sbjct: 80  FTLEGHKFLIFGGSIHYFRVPREYWRDRLLKLKACGFNTVTT 121


>gi|169216514 PREDICTED: similar to paraneoplastic antigen MA2 [Homo
           sapiens]
          Length = 340

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 17/57 (29%), Positives = 26/57 (45%)

Query: 82  TLPGSCGQVVGSPSAQDEASPLSEWRASYNSAGSNITDAFLSQRKCEPKGPLINSEF 138
           T P    + VG   A  EA    E  A   + G+N+T A++  R+C  +  L N  +
Sbjct: 182 TGPAGEAEAVGEAGAVGEAGAAGEAGAVGEARGTNVTRAWVQPRRCTLQAVLENRAY 238


>gi|169216749 PREDICTED: similar to Putative paraneoplastic
           antigen-like protein 6B-like protein [Homo sapiens]
          Length = 340

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 17/57 (29%), Positives = 26/57 (45%)

Query: 82  TLPGSCGQVVGSPSAQDEASPLSEWRASYNSAGSNITDAFLSQRKCEPKGPLINSEF 138
           T P    + VG   A  EA    E  A   + G+N+T A++  R+C  +  L N  +
Sbjct: 182 TGPAGEAEAVGEAGAVGEAGAAGEAGAVGEARGTNVTRAWVQPRRCTLQAVLENRAY 238


>gi|82830424 gon-4-like isoform a [Homo sapiens]
          Length = 2240

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 4/53 (7%)

Query: 206 LSEAGDLTEKYFALRNIIQKFEKVPEGPIPPSTPKFAYGKVTLEKLKTVGAAL 258
           LSEA  +T    A+R+I    E VP GP PP  PK       +EKL  V   L
Sbjct: 425 LSEAEKVTTP--AIRHI--SAEVVPMGPPPPPKPKQTRDSTFMEKLHAVDEEL 473


>gi|82830428 gon-4-like isoform b [Homo sapiens]
          Length = 1529

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 4/53 (7%)

Query: 206 LSEAGDLTEKYFALRNIIQKFEKVPEGPIPPSTPKFAYGKVTLEKLKTVGAAL 258
           LSEA  +T    A+R+I    E VP GP PP  PK       +EKL  V   L
Sbjct: 425 LSEAEKVTTP--AIRHI--SAEVVPMGPPPPPKPKQTRDSTFMEKLHAVDEEL 473


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.137    0.433 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,252,300
Number of Sequences: 37866
Number of extensions: 1119033
Number of successful extensions: 2574
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2551
Number of HSP's gapped (non-prelim): 15
length of query: 546
length of database: 18,247,518
effective HSP length: 107
effective length of query: 439
effective length of database: 14,195,856
effective search space: 6231980784
effective search space used: 6231980784
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.