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Search of human proteins with 207442678
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|207442678 double homeobox, 3 [Homo sapiens]
(197 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|207442678 double homeobox, 3 [Homo sapiens] 408 e-114
gi|207442670 double homeobox, 5 [Homo sapiens] 393 e-110
gi|11120736 double homeobox, 1 [Homo sapiens] 339 1e-93
gi|239742468 PREDICTED: double homeobox, 4-like [Homo sapiens] 323 6e-89
gi|239742467 PREDICTED: double homeobox, 4-like [Homo sapiens] 323 6e-89
gi|194272172 double homeobox, 4 [Homo sapiens] 323 6e-89
gi|194272217 double homeobox, 4-like [Homo sapiens] 323 6e-89
gi|194272216 double homeobox, 4-like [Homo sapiens] 323 6e-89
gi|194272215 double homeobox, 4-like [Homo sapiens] 323 6e-89
gi|194272192 double homeobox, 4-like [Homo sapiens] 323 6e-89
gi|239744246 PREDICTED: hypothetical protein XP_002343082 [Homo ... 323 8e-89
gi|239744249 PREDICTED: similar to double homeobox, 4 [Homo sapi... 321 3e-88
gi|239744248 PREDICTED: similar to double homeobox, 4 [Homo sapi... 321 3e-88
gi|239744242 PREDICTED: similar to double homeobox, 4 [Homo sapi... 321 3e-88
gi|239744240 PREDICTED: similar to double homeobox, 4 [Homo sapi... 321 3e-88
gi|239744244 PREDICTED: similar to double homeobox, 4 [Homo sapi... 318 1e-87
gi|239758067 PREDICTED: similar to facioscapulohumeral muscular ... 299 9e-82
gi|239752536 PREDICTED: hypothetical protein XP_002346688 [Homo ... 298 2e-81
gi|239758001 PREDICTED: similar to facioscapulohumeral muscular ... 292 1e-79
gi|239752515 PREDICTED: similar to double homeobox, 4 [Homo sapi... 274 3e-74
gi|239742065 PREDICTED: hypothetical protein XP_002342402 [Homo ... 257 5e-69
gi|169217788 PREDICTED: similar to putative DUX4 protein [Homo s... 233 1e-61
gi|89062404 PREDICTED: similar to putative DUX4 protein [Homo sa... 233 1e-61
gi|239758086 PREDICTED: similar to double homeobox, 4 [Homo sapi... 218 2e-57
gi|239758111 PREDICTED: similar to facioscapulohumeral muscular ... 143 8e-35
gi|239752588 PREDICTED: hypothetical protein XP_002348309, parti... 107 7e-24
gi|61969662 double homeobox A [Homo sapiens] 106 1e-23
gi|239751129 PREDICTED: hypothetical protein XP_002347726 [Homo ... 97 7e-21
gi|239745620 PREDICTED: hypothetical protein XP_002344158 [Homo ... 97 7e-21
gi|20070107 orthodenticle homeobox 1 [Homo sapiens] 67 1e-11
>gi|207442678 double homeobox, 3 [Homo sapiens]
Length = 197
Score = 408 bits (1049), Expect = e-114
Identities = 197/197 (100%), Positives = 197/197 (100%)
Query: 1 MPAEVHGSPPASLCPCPSVKFRPGLPAMALLTALDDTLPEEAQGPGRRMILLSTPSQSDA 60
MPAEVHGSPPASLCPCPSVKFRPGLPAMALLTALDDTLPEEAQGPGRRMILLSTPSQSDA
Sbjct: 1 MPAEVHGSPPASLCPCPSVKFRPGLPAMALLTALDDTLPEEAQGPGRRMILLSTPSQSDA 60
Query: 61 LRACFERNLYPGIATKEQLAQGIDIPEPRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQK 120
LRACFERNLYPGIATKEQLAQGIDIPEPRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQK
Sbjct: 61 LRACFERNLYPGIATKEQLAQGIDIPEPRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQK 120
Query: 121 GRRKRTAITGSQTALLLRAFEKDRFPGIPAREELARETGLPESRIQLWFQNRRARHWGQS 180
GRRKRTAITGSQTALLLRAFEKDRFPGIPAREELARETGLPESRIQLWFQNRRARHWGQS
Sbjct: 121 GRRKRTAITGSQTALLLRAFEKDRFPGIPAREELARETGLPESRIQLWFQNRRARHWGQS 180
Query: 181 GRAPTQASIRCNAAPIG 197
GRAPTQASIRCNAAPIG
Sbjct: 181 GRAPTQASIRCNAAPIG 197
>gi|207442670 double homeobox, 5 [Homo sapiens]
Length = 197
Score = 393 bits (1009), Expect = e-110
Identities = 191/197 (96%), Positives = 193/197 (97%)
Query: 1 MPAEVHGSPPASLCPCPSVKFRPGLPAMALLTALDDTLPEEAQGPGRRMILLSTPSQSDA 60
MPAEVHGSPPASLCPC SVKFRPGLP MALLTALDDTLPEEAQGPGRRMILLSTPSQSDA
Sbjct: 1 MPAEVHGSPPASLCPCQSVKFRPGLPEMALLTALDDTLPEEAQGPGRRMILLSTPSQSDA 60
Query: 61 LRACFERNLYPGIATKEQLAQGIDIPEPRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQK 120
LRACFERNLYPGIATKE+LAQGIDIPEPRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQK
Sbjct: 61 LRACFERNLYPGIATKEELAQGIDIPEPRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQK 120
Query: 121 GRRKRTAITGSQTALLLRAFEKDRFPGIPAREELARETGLPESRIQLWFQNRRARHWGQS 180
GRRKRTAITGSQTALLLRAFEKDRFPGI AREELARETGLPESRIQ+WFQNRRARH GQS
Sbjct: 121 GRRKRTAITGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARHRGQS 180
Query: 181 GRAPTQASIRCNAAPIG 197
GRAPTQASIRCNAAPIG
Sbjct: 181 GRAPTQASIRCNAAPIG 197
>gi|11120736 double homeobox, 1 [Homo sapiens]
Length = 170
Score = 339 bits (869), Expect = 1e-93
Identities = 166/170 (97%), Positives = 168/170 (98%)
Query: 28 MALLTALDDTLPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEQLAQGIDIPE 87
MALLTALDDTLPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKE+LAQGIDIPE
Sbjct: 1 MALLTALDDTLPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEELAQGIDIPE 60
Query: 88 PRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPG 147
PRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPG
Sbjct: 61 PRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPG 120
Query: 148 IPAREELARETGLPESRIQLWFQNRRARHWGQSGRAPTQASIRCNAAPIG 197
I AREELARETGLPESRIQ+WFQNRRARH GQSGRAPTQASIRCNAAPIG
Sbjct: 121 IAAREELARETGLPESRIQIWFQNRRARHRGQSGRAPTQASIRCNAAPIG 170
>gi|239742468 PREDICTED: double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 323 bits (828), Expect = 6e-89
Identities = 161/196 (82%), Positives = 171/196 (87%)
Query: 2 PAEVHGSPPASLCPCPSVKFRPGLPAMALLTALDDTLPEEAQGPGRRMILLSTPSQSDAL 61
PAEVHGSPPASLCP PSVKFRPGL AMAL T D TLP EA+G GRR L+ TPSQS+AL
Sbjct: 36 PAEVHGSPPASLCPRPSVKFRPGLTAMALPTPSDSTLPAEARGRGRRRRLVWTPSQSEAL 95
Query: 62 RACFERNLYPGIATKEQLAQGIDIPEPRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKG 121
RACFERN YPGIAT+E+LAQ I IPEPRVQIWFQNERS QLRQHRR+SRPWPGRR P +G
Sbjct: 96 RACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHRRESRPWPGRRGPPEG 155
Query: 122 RRKRTAITGSQTALLLRAFEKDRFPGIPAREELARETGLPESRIQLWFQNRRARHWGQSG 181
RRKRTA+TGSQTALLLRAFEKDRFPGI AREELARETGLPESRIQ+WFQNRRARH GQ G
Sbjct: 156 RRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARHPGQGG 215
Query: 182 RAPTQASIRCNAAPIG 197
RAP QA C+AAP G
Sbjct: 216 RAPAQAGGLCSAAPGG 231
>gi|239742467 PREDICTED: double homeobox, 4-like [Homo sapiens]
Length = 483
Score = 323 bits (828), Expect = 6e-89
Identities = 161/196 (82%), Positives = 171/196 (87%)
Query: 2 PAEVHGSPPASLCPCPSVKFRPGLPAMALLTALDDTLPEEAQGPGRRMILLSTPSQSDAL 61
PAEVHGSPPASLCP PSVKFRPGL AMAL T D TLP EA+G GRR L+ TPSQS+AL
Sbjct: 36 PAEVHGSPPASLCPRPSVKFRPGLTAMALPTPSDSTLPAEARGRGRRRRLVWTPSQSEAL 95
Query: 62 RACFERNLYPGIATKEQLAQGIDIPEPRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKG 121
RACFERN YPGIAT+E+LAQ I IPEPRVQIWFQNERS QLRQHRR+SRPWPGRR P +G
Sbjct: 96 RACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHRRESRPWPGRRGPPEG 155
Query: 122 RRKRTAITGSQTALLLRAFEKDRFPGIPAREELARETGLPESRIQLWFQNRRARHWGQSG 181
RRKRTA+TGSQTALLLRAFEKDRFPGI AREELARETGLPESRIQ+WFQNRRARH GQ G
Sbjct: 156 RRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARHPGQGG 215
Query: 182 RAPTQASIRCNAAPIG 197
RAP QA C+AAP G
Sbjct: 216 RAPAQAGGLCSAAPGG 231
>gi|194272172 double homeobox, 4 [Homo sapiens]
Length = 485
Score = 323 bits (828), Expect = 6e-89
Identities = 161/196 (82%), Positives = 171/196 (87%)
Query: 2 PAEVHGSPPASLCPCPSVKFRPGLPAMALLTALDDTLPEEAQGPGRRMILLSTPSQSDAL 61
PAEVHGSPPASLCP PSVKFRPGL AMAL T D TLP EA+G GRR L+ TPSQS+AL
Sbjct: 36 PAEVHGSPPASLCPRPSVKFRPGLTAMALPTPSDSTLPAEARGRGRRRRLVWTPSQSEAL 95
Query: 62 RACFERNLYPGIATKEQLAQGIDIPEPRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKG 121
RACFERN YPGIAT+E+LAQ I IPEPRVQIWFQNERS QLRQHRR+SRPWPGRR P +G
Sbjct: 96 RACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHRRESRPWPGRRGPPEG 155
Query: 122 RRKRTAITGSQTALLLRAFEKDRFPGIPAREELARETGLPESRIQLWFQNRRARHWGQSG 181
RRKRTA+TGSQTALLLRAFEKDRFPGI AREELARETGLPESRIQ+WFQNRRARH GQ G
Sbjct: 156 RRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARHPGQGG 215
Query: 182 RAPTQASIRCNAAPIG 197
RAP QA C+AAP G
Sbjct: 216 RAPAQAGGLCSAAPGG 231
>gi|194272217 double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 323 bits (828), Expect = 6e-89
Identities = 161/196 (82%), Positives = 171/196 (87%)
Query: 2 PAEVHGSPPASLCPCPSVKFRPGLPAMALLTALDDTLPEEAQGPGRRMILLSTPSQSDAL 61
PAEVHGSPPASLCP PSVKFRPGL AMAL T D TLP EA+G GRR L+ TPSQS+AL
Sbjct: 36 PAEVHGSPPASLCPRPSVKFRPGLTAMALPTPSDSTLPAEARGRGRRRRLVWTPSQSEAL 95
Query: 62 RACFERNLYPGIATKEQLAQGIDIPEPRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKG 121
RACFERN YPGIAT+E+LAQ I IPEPRVQIWFQNERS QLRQHRR+SRPWPGRR P +G
Sbjct: 96 RACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHRRESRPWPGRRGPPEG 155
Query: 122 RRKRTAITGSQTALLLRAFEKDRFPGIPAREELARETGLPESRIQLWFQNRRARHWGQSG 181
RRKRTA+TGSQTALLLRAFEKDRFPGI AREELARETGLPESRIQ+WFQNRRARH GQ G
Sbjct: 156 RRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARHPGQGG 215
Query: 182 RAPTQASIRCNAAPIG 197
RAP QA C+AAP G
Sbjct: 216 RAPAQAGGLCSAAPGG 231
>gi|194272216 double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 323 bits (828), Expect = 6e-89
Identities = 161/196 (82%), Positives = 171/196 (87%)
Query: 2 PAEVHGSPPASLCPCPSVKFRPGLPAMALLTALDDTLPEEAQGPGRRMILLSTPSQSDAL 61
PAEVHGSPPASLCP PSVKFRPGL AMAL T D TLP EA+G GRR L+ TPSQS+AL
Sbjct: 36 PAEVHGSPPASLCPRPSVKFRPGLTAMALPTPSDSTLPAEARGRGRRRRLVWTPSQSEAL 95
Query: 62 RACFERNLYPGIATKEQLAQGIDIPEPRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKG 121
RACFERN YPGIAT+E+LAQ I IPEPRVQIWFQNERS QLRQHRR+SRPWPGRR P +G
Sbjct: 96 RACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHRRESRPWPGRRGPPEG 155
Query: 122 RRKRTAITGSQTALLLRAFEKDRFPGIPAREELARETGLPESRIQLWFQNRRARHWGQSG 181
RRKRTA+TGSQTALLLRAFEKDRFPGI AREELARETGLPESRIQ+WFQNRRARH GQ G
Sbjct: 156 RRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARHPGQGG 215
Query: 182 RAPTQASIRCNAAPIG 197
RAP QA C+AAP G
Sbjct: 216 RAPAQAGGLCSAAPGG 231
>gi|194272215 double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 323 bits (828), Expect = 6e-89
Identities = 161/196 (82%), Positives = 171/196 (87%)
Query: 2 PAEVHGSPPASLCPCPSVKFRPGLPAMALLTALDDTLPEEAQGPGRRMILLSTPSQSDAL 61
PAEVHGSPPASLCP PSVKFRPGL AMAL T D TLP EA+G GRR L+ TPSQS+AL
Sbjct: 36 PAEVHGSPPASLCPRPSVKFRPGLTAMALPTPSDSTLPAEARGRGRRRRLVWTPSQSEAL 95
Query: 62 RACFERNLYPGIATKEQLAQGIDIPEPRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKG 121
RACFERN YPGIAT+E+LAQ I IPEPRVQIWFQNERS QLRQHRR+SRPWPGRR P +G
Sbjct: 96 RACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHRRESRPWPGRRGPPEG 155
Query: 122 RRKRTAITGSQTALLLRAFEKDRFPGIPAREELARETGLPESRIQLWFQNRRARHWGQSG 181
RRKRTA+TGSQTALLLRAFEKDRFPGI AREELARETGLPESRIQ+WFQNRRARH GQ G
Sbjct: 156 RRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARHPGQGG 215
Query: 182 RAPTQASIRCNAAPIG 197
RAP QA C+AAP G
Sbjct: 216 RAPAQAGGLCSAAPGG 231
>gi|194272192 double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 323 bits (828), Expect = 6e-89
Identities = 161/196 (82%), Positives = 171/196 (87%)
Query: 2 PAEVHGSPPASLCPCPSVKFRPGLPAMALLTALDDTLPEEAQGPGRRMILLSTPSQSDAL 61
PAEVHGSPPASLCP PSVKFRPGL AMAL T D TLP EA+G GRR L+ TPSQS+AL
Sbjct: 36 PAEVHGSPPASLCPRPSVKFRPGLTAMALPTPSDSTLPAEARGRGRRRRLVWTPSQSEAL 95
Query: 62 RACFERNLYPGIATKEQLAQGIDIPEPRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKG 121
RACFERN YPGIAT+E+LAQ I IPEPRVQIWFQNERS QLRQHRR+SRPWPGRR P +G
Sbjct: 96 RACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHRRESRPWPGRRGPPEG 155
Query: 122 RRKRTAITGSQTALLLRAFEKDRFPGIPAREELARETGLPESRIQLWFQNRRARHWGQSG 181
RRKRTA+TGSQTALLLRAFEKDRFPGI AREELARETGLPESRIQ+WFQNRRARH GQ G
Sbjct: 156 RRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARHPGQGG 215
Query: 182 RAPTQASIRCNAAPIG 197
RAP QA C+AAP G
Sbjct: 216 RAPAQAGGLCSAAPGG 231
>gi|239744246 PREDICTED: hypothetical protein XP_002343082 [Homo
sapiens]
Length = 483
Score = 323 bits (827), Expect = 8e-89
Identities = 161/196 (82%), Positives = 170/196 (86%)
Query: 2 PAEVHGSPPASLCPCPSVKFRPGLPAMALLTALDDTLPEEAQGPGRRMILLSTPSQSDAL 61
PAEVHGSPPASLCP PSVK RPGL AMAL T D TLP EA+G GRR L+ TPSQS+AL
Sbjct: 36 PAEVHGSPPASLCPRPSVKLRPGLTAMALPTPSDSTLPAEARGRGRRRRLVWTPSQSEAL 95
Query: 62 RACFERNLYPGIATKEQLAQGIDIPEPRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKG 121
RACFERN YPGIAT+E+LAQ I IPEPRVQIWFQNERS QLRQHRR+SRPWPGRR P +G
Sbjct: 96 RACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHRRESRPWPGRRGPPEG 155
Query: 122 RRKRTAITGSQTALLLRAFEKDRFPGIPAREELARETGLPESRIQLWFQNRRARHWGQSG 181
RRKRTA+TGSQTALLLRAFEKDRFPGI AREELARETGLPESRIQ+WFQNRRARH GQ G
Sbjct: 156 RRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARHPGQGG 215
Query: 182 RAPTQASIRCNAAPIG 197
RAP QA CNAAP G
Sbjct: 216 RAPAQAGGLCNAAPGG 231
>gi|239744249 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 483
Score = 321 bits (822), Expect = 3e-88
Identities = 160/196 (81%), Positives = 170/196 (86%)
Query: 2 PAEVHGSPPASLCPCPSVKFRPGLPAMALLTALDDTLPEEAQGPGRRMILLSTPSQSDAL 61
PAEVHGSPPASLCP PSVK RPGL AMAL T D TLP EA+G GRR L+ TPSQS+AL
Sbjct: 36 PAEVHGSPPASLCPRPSVKLRPGLTAMALPTPSDSTLPAEARGRGRRRRLVWTPSQSEAL 95
Query: 62 RACFERNLYPGIATKEQLAQGIDIPEPRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKG 121
RACFERN YPGIAT+E+LAQ I IPEPRVQIWFQNERS QLRQHRR+SRPWPGRR P +G
Sbjct: 96 RACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHRRESRPWPGRRGPPEG 155
Query: 122 RRKRTAITGSQTALLLRAFEKDRFPGIPAREELARETGLPESRIQLWFQNRRARHWGQSG 181
RRKRTA+TGSQTALLLRAFEKDRFPGI AREELARETGLPESRIQ+WFQNRRARH GQ G
Sbjct: 156 RRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARHPGQGG 215
Query: 182 RAPTQASIRCNAAPIG 197
RAP QA C+AAP G
Sbjct: 216 RAPAQAGGLCSAAPGG 231
>gi|239744248 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 483
Score = 321 bits (822), Expect = 3e-88
Identities = 160/196 (81%), Positives = 170/196 (86%)
Query: 2 PAEVHGSPPASLCPCPSVKFRPGLPAMALLTALDDTLPEEAQGPGRRMILLSTPSQSDAL 61
PAEVHGSPPASLCP PSVK RPGL AMAL T D TLP EA+G GRR L+ TPSQS+AL
Sbjct: 36 PAEVHGSPPASLCPRPSVKLRPGLTAMALPTPSDSTLPAEARGRGRRRRLVWTPSQSEAL 95
Query: 62 RACFERNLYPGIATKEQLAQGIDIPEPRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKG 121
RACFERN YPGIAT+E+LAQ I IPEPRVQIWFQNERS QLRQHRR+SRPWPGRR P +G
Sbjct: 96 RACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHRRESRPWPGRRGPPEG 155
Query: 122 RRKRTAITGSQTALLLRAFEKDRFPGIPAREELARETGLPESRIQLWFQNRRARHWGQSG 181
RRKRTA+TGSQTALLLRAFEKDRFPGI AREELARETGLPESRIQ+WFQNRRARH GQ G
Sbjct: 156 RRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARHPGQGG 215
Query: 182 RAPTQASIRCNAAPIG 197
RAP QA C+AAP G
Sbjct: 216 RAPAQAGGLCSAAPGG 231
>gi|239744242 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 483
Score = 321 bits (822), Expect = 3e-88
Identities = 160/196 (81%), Positives = 170/196 (86%)
Query: 2 PAEVHGSPPASLCPCPSVKFRPGLPAMALLTALDDTLPEEAQGPGRRMILLSTPSQSDAL 61
PAEVHGSPPASLCP PSVK RPGL AMAL T D TLP EA+G GRR L+ TPSQS+AL
Sbjct: 36 PAEVHGSPPASLCPRPSVKLRPGLTAMALPTPSDSTLPAEARGRGRRRRLVWTPSQSEAL 95
Query: 62 RACFERNLYPGIATKEQLAQGIDIPEPRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKG 121
RACFERN YPGIAT+E+LAQ I IPEPRVQIWFQNERS QLRQHRR+SRPWPGRR P +G
Sbjct: 96 RACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHRRESRPWPGRRGPPEG 155
Query: 122 RRKRTAITGSQTALLLRAFEKDRFPGIPAREELARETGLPESRIQLWFQNRRARHWGQSG 181
RRKRTA+TGSQTALLLRAFEKDRFPGI AREELARETGLPESRIQ+WFQNRRARH GQ G
Sbjct: 156 RRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARHPGQGG 215
Query: 182 RAPTQASIRCNAAPIG 197
RAP QA C+AAP G
Sbjct: 216 RAPAQAGGLCSAAPGG 231
>gi|239744240 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 483
Score = 321 bits (822), Expect = 3e-88
Identities = 160/196 (81%), Positives = 170/196 (86%)
Query: 2 PAEVHGSPPASLCPCPSVKFRPGLPAMALLTALDDTLPEEAQGPGRRMILLSTPSQSDAL 61
PAEVHGSPPASLCP PSVK RPGL AMAL T D TLP EA+G GRR L+ TPSQS+AL
Sbjct: 36 PAEVHGSPPASLCPRPSVKLRPGLTAMALPTPSDSTLPAEARGRGRRRRLVWTPSQSEAL 95
Query: 62 RACFERNLYPGIATKEQLAQGIDIPEPRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKG 121
RACFERN YPGIAT+E+LAQ I IPEPRVQIWFQNERS QLRQHRR+SRPWPGRR P +G
Sbjct: 96 RACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHRRESRPWPGRRGPPEG 155
Query: 122 RRKRTAITGSQTALLLRAFEKDRFPGIPAREELARETGLPESRIQLWFQNRRARHWGQSG 181
RRKRTA+TGSQTALLLRAFEKDRFPGI AREELARETGLPESRIQ+WFQNRRARH GQ G
Sbjct: 156 RRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARHPGQGG 215
Query: 182 RAPTQASIRCNAAPIG 197
RAP QA C+AAP G
Sbjct: 216 RAPAQAGGLCSAAPGG 231
>gi|239744244 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 483
Score = 318 bits (816), Expect = 1e-87
Identities = 159/196 (81%), Positives = 169/196 (86%)
Query: 2 PAEVHGSPPASLCPCPSVKFRPGLPAMALLTALDDTLPEEAQGPGRRMILLSTPSQSDAL 61
PAEVHGSPPASLCP PSVK RPGL AMAL T D TLP EA+G GRR L+ TPSQS+AL
Sbjct: 36 PAEVHGSPPASLCPRPSVKLRPGLTAMALPTPSDSTLPAEARGRGRRRRLVWTPSQSEAL 95
Query: 62 RACFERNLYPGIATKEQLAQGIDIPEPRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKG 121
RACFERN YPGIAT+E+LAQ I IPEPRVQIWFQNERS QLRQHRR+SRPWPGRR P +G
Sbjct: 96 RACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHRRESRPWPGRRGPPEG 155
Query: 122 RRKRTAITGSQTALLLRAFEKDRFPGIPAREELARETGLPESRIQLWFQNRRARHWGQSG 181
RRKRTA+TG QTALLLRAFEKDRFPGI AREELARETGLPESRIQ+WFQNRRARH GQ G
Sbjct: 156 RRKRTAVTGFQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARHPGQGG 215
Query: 182 RAPTQASIRCNAAPIG 197
RAP QA C+AAP G
Sbjct: 216 RAPAQAGGLCSAAPGG 231
>gi|239758067 PREDICTED: similar to facioscapulohumeral muscular
dystrophy [Homo sapiens]
Length = 468
Score = 299 bits (766), Expect = 9e-82
Identities = 149/192 (77%), Positives = 161/192 (83%)
Query: 3 AEVHGSPPASLCPCPSVKFRPGLPAMALLTALDDTLPEEAQGPGRRMILLSTPSQSDALR 62
AEVHGSPPASLCPCPSVKF+PGLPAMAL T D T EAQG GRR ++ TPSQ +ALR
Sbjct: 70 AEVHGSPPASLCPCPSVKFQPGLPAMALPTPSDGTHTAEAQGSGRRRRIVWTPSQREALR 129
Query: 63 ACFERNLYPGIATKEQLAQGIDIPEPRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGR 122
ACFERN Y GI T+EQLAQ I I EPRV IWFQNERS QLRQHRR+SRPWPGR P +GR
Sbjct: 130 ACFERNPYLGITTREQLAQAIGILEPRVPIWFQNERSSQLRQHRRKSRPWPGRHGPPEGR 189
Query: 123 RKRTAITGSQTALLLRAFEKDRFPGIPAREELARETGLPESRIQLWFQNRRARHWGQSGR 182
KRTA+TGSQTAL LRAFEKDRFPGI A+EELARET LPESRIQ+WFQNRRARH GQ+GR
Sbjct: 190 GKRTAVTGSQTALFLRAFEKDRFPGIAAKEELARETVLPESRIQIWFQNRRARHPGQAGR 249
Query: 183 APTQASIRCNAA 194
APT+A CNAA
Sbjct: 250 APTKAGSLCNAA 261
>gi|239752536 PREDICTED: hypothetical protein XP_002346688 [Homo
sapiens]
Length = 236
Score = 298 bits (763), Expect = 2e-81
Identities = 149/192 (77%), Positives = 161/192 (83%)
Query: 3 AEVHGSPPASLCPCPSVKFRPGLPAMALLTALDDTLPEEAQGPGRRMILLSTPSQSDALR 62
AEVHGSPPASLCPCPSVKF+PGLPAMAL T D T EAQG GRR ++ TPSQ +ALR
Sbjct: 14 AEVHGSPPASLCPCPSVKFQPGLPAMALPTPSDGTHTAEAQGWGRRRRIVWTPSQREALR 73
Query: 63 ACFERNLYPGIATKEQLAQGIDIPEPRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGR 122
ACFERN Y GI T+EQLAQ I I EPRV IWFQNERS QLRQHRR+SRPWPGR P +GR
Sbjct: 74 ACFERNPYLGITTREQLAQAIGILEPRVPIWFQNERSSQLRQHRRKSRPWPGRHGPPEGR 133
Query: 123 RKRTAITGSQTALLLRAFEKDRFPGIPAREELARETGLPESRIQLWFQNRRARHWGQSGR 182
KRTA+TGSQTAL LRAFEKDRFPGI A+EELARET LPESRIQ+WFQNRRARH GQ+GR
Sbjct: 134 GKRTAVTGSQTALFLRAFEKDRFPGIAAKEELARETVLPESRIQIWFQNRRARHPGQAGR 193
Query: 183 APTQASIRCNAA 194
APT+A CNAA
Sbjct: 194 APTKAGSLCNAA 205
>gi|239758001 PREDICTED: similar to facioscapulohumeral muscular
dystrophy [Homo sapiens]
Length = 300
Score = 292 bits (747), Expect = 1e-79
Identities = 145/195 (74%), Positives = 161/195 (82%)
Query: 3 AEVHGSPPASLCPCPSVKFRPGLPAMALLTALDDTLPEEAQGPGRRMILLSTPSQSDALR 62
AEVHG P +SLCPCPS+KF+PGLPAMAL T LD T EAQG GRR ++ TPSQ +ALR
Sbjct: 70 AEVHGGPRSSLCPCPSMKFQPGLPAMALPTPLDGTHTAEAQGRGRRRRIVWTPSQREALR 129
Query: 63 ACFERNLYPGIATKEQLAQGIDIPEPRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGR 122
ACFERN Y GI T+EQLAQ I I EPRVQIWFQNERS QLRQHR++SRPWPGR P +GR
Sbjct: 130 ACFERNPYLGITTREQLAQAIGILEPRVQIWFQNERSSQLRQHRQKSRPWPGRHGPPEGR 189
Query: 123 RKRTAITGSQTALLLRAFEKDRFPGIPAREELARETGLPESRIQLWFQNRRARHWGQSGR 182
RK+T +TGSQTAL LRAFEKDRFPGI A+EELARET LPESRIQ+WFQNRRARH GQ+GR
Sbjct: 190 RKQTTVTGSQTALFLRAFEKDRFPGIAAKEELARETVLPESRIQIWFQNRRARHPGQAGR 249
Query: 183 APTQASIRCNAAPIG 197
AP +A CNAA G
Sbjct: 250 APAKAGGLCNAATGG 264
>gi|239752515 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 479
Score = 274 bits (701), Expect = 3e-74
Identities = 142/195 (72%), Positives = 154/195 (78%)
Query: 3 AEVHGSPPASLCPCPSVKFRPGLPAMALLTALDDTLPEEAQGPGRRMILLSTPSQSDALR 62
AEVHGSP ASLCPCPSVKFRPG PAMA T D TL EAQG G R L+ TPSQS AL+
Sbjct: 33 AEVHGSPLASLCPCPSVKFRPGFPAMAFPTPSDGTLTAEAQGWGLRRRLVWTPSQSXALQ 92
Query: 63 ACFERNLYPGIATKEQLAQGIDIPEPRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGR 122
AC+ERN Y GIAT+E+LAQ I I EPRVQIWFQNERS QLRQHRR SRPWPGRR ++
Sbjct: 93 ACYERNPYLGIATRERLAQAIVILEPRVQIWFQNERSRQLRQHRRDSRPWPGRRGLKEVW 152
Query: 123 RKRTAITGSQTALLLRAFEKDRFPGIPAREELARETGLPESRIQLWFQNRRARHWGQSGR 182
+KRTA+TGS+T LLLRAFEKDRF GI REELARETG PESRIQ+WFQNRRARH GQ+GR
Sbjct: 153 QKRTAVTGSRTYLLLRAFEKDRFTGIATREELARETGTPESRIQIWFQNRRARHPGQAGR 212
Query: 183 APTQASIRCNAAPIG 197
P A N AP G
Sbjct: 213 VPAHAGGLYNTAPGG 227
>gi|239742065 PREDICTED: hypothetical protein XP_002342402 [Homo
sapiens]
Length = 381
Score = 257 bits (656), Expect = 5e-69
Identities = 127/159 (79%), Positives = 137/159 (86%)
Query: 39 PEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEQLAQGIDIPEPRVQIWFQNER 98
P ++G GRR L+ TPSQS+ LRACFERN YPGIAT+E+LAQ I IPEPRVQIWFQNER
Sbjct: 150 PLTSRGRGRRRRLVWTPSQSEVLRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNER 209
Query: 99 SCQLRQHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPGIPAREELARET 158
S QLRQHRR+SRPWPGRR Q+GRRKRTA+TGSQTALLLRAFEKDRFPGI AREELARET
Sbjct: 210 SRQLRQHRRESRPWPGRRGLQEGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARET 269
Query: 159 GLPESRIQLWFQNRRARHWGQSGRAPTQASIRCNAAPIG 197
GLPESRIQ+WFQNRRARH GQ GRAP A CNAAP G
Sbjct: 270 GLPESRIQIWFQNRRARHPGQGGRAPAHAGGLCNAAPSG 308
>gi|169217788 PREDICTED: similar to putative DUX4 protein [Homo
sapiens]
Length = 422
Score = 233 bits (593), Expect = 1e-61
Identities = 119/170 (70%), Positives = 132/170 (77%)
Query: 28 MALLTALDDTLPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEQLAQGIDIPE 87
MAL T L TLP E+QG G R L+ TPS+S+ALRACFE N YPGI T +LAQ I I E
Sbjct: 1 MALPTPLYSTLPVESQGRGSRRRLIWTPSKSEALRACFEWNPYPGITTGGRLAQAIGISE 60
Query: 88 PRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPG 147
PRVQIWFQNERSCQL Q +R+S PWPGR Q+GRRK TA+TGSQTAL L+AFEKDRFP
Sbjct: 61 PRVQIWFQNERSCQLMQDQRESWPWPGRCGTQEGRRKPTAVTGSQTALYLQAFEKDRFPD 120
Query: 148 IPAREELARETGLPESRIQLWFQNRRARHWGQSGRAPTQASIRCNAAPIG 197
I AREELARETGLPESR ++WFQNRRARH GQ+GR P QA CN P G
Sbjct: 121 IAAREELARETGLPESRSEIWFQNRRARHPGQAGREPAQAGGLCNVVPGG 170
>gi|89062404 PREDICTED: similar to putative DUX4 protein [Homo
sapiens]
Length = 422
Score = 233 bits (593), Expect = 1e-61
Identities = 119/170 (70%), Positives = 132/170 (77%)
Query: 28 MALLTALDDTLPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEQLAQGIDIPE 87
MAL T L TLP E+QG G R L+ TPS+S+ALRACFE N YPGI T +LAQ I I E
Sbjct: 1 MALPTPLYSTLPVESQGRGSRRRLIWTPSKSEALRACFEWNPYPGITTGGRLAQAIGISE 60
Query: 88 PRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPG 147
PRVQIWFQNERSCQL Q +R+S PWPGR Q+GRRK TA+TGSQTAL L+AFEKDRFP
Sbjct: 61 PRVQIWFQNERSCQLMQDQRESWPWPGRCGTQEGRRKPTAVTGSQTALYLQAFEKDRFPD 120
Query: 148 IPAREELARETGLPESRIQLWFQNRRARHWGQSGRAPTQASIRCNAAPIG 197
I AREELARETGLPESR ++WFQNRRARH GQ+GR P QA CN P G
Sbjct: 121 IAAREELARETGLPESRSEIWFQNRRARHPGQAGREPAQAGGLCNVVPGG 170
>gi|239758086 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 422
Score = 218 bits (556), Expect = 2e-57
Identities = 116/168 (69%), Positives = 128/168 (76%)
Query: 28 MALLTALDDTLPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEQLAQGIDIPE 87
MAL T D TLP EA G GRR L+ +P +S AL A E+N Y GIAT+E+L + I IPE
Sbjct: 1 MALPTPSDGTLPAEAWGRGRRRRLVWSPXESQALGASVEQNPYLGIATRERLTRAIVIPE 60
Query: 88 PRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPG 147
RVQI FQNERS QLRQHR +SRP P R PQ+GRRKRTA+TGSQT LLLRAFEKDRFPG
Sbjct: 61 SRVQICFQNERSRQLRQHRWESRPRPRRCAPQEGRRKRTAVTGSQTTLLLRAFEKDRFPG 120
Query: 148 IPAREELARETGLPESRIQLWFQNRRARHWGQSGRAPTQASIRCNAAP 195
I REELARETGLP SRIQ+WF NRRARH GQ+ RAP QA CNA P
Sbjct: 121 IATREELARETGLPASRIQMWFPNRRARHPGQAARAPAQAGSLCNAVP 168
>gi|239758111 PREDICTED: similar to facioscapulohumeral muscular
dystrophy [Homo sapiens]
Length = 106
Score = 143 bits (361), Expect = 8e-35
Identities = 74/104 (71%), Positives = 82/104 (78%)
Query: 28 MALLTALDDTLPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEQLAQGIDIPE 87
MAL T D TLP EAQG GRR LL T SQS+ALRACFERN YP IAT+E+LAQ I IP+
Sbjct: 1 MALPTPSDGTLPAEAQGRGRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQ 60
Query: 88 PRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGRRKRTAITGS 131
PRVQIWF NERS LRQH+ +S PWPGRR Q+GRRKRTA+T S
Sbjct: 61 PRVQIWFHNERSRYLRQHQWESWPWPGRRGTQEGRRKRTAVTRS 104
Score = 60.8 bits (146), Expect = 7e-10
Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 8/83 (9%)
Query: 120 KGRRKRTAITGSQTALLLRAFEKDRFPGIPAREELARETGLPESRIQLWFQNRRARH--- 176
+GRRKR T SQ+ L FE++ +P I RE LA+ G+P+ R+Q+WF N R+R+
Sbjct: 18 RGRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQPRVQIWFHNERSRYLRQ 77
Query: 177 -----WGQSGRAPTQASIRCNAA 194
W GR TQ R A
Sbjct: 78 HQWESWPWPGRRGTQEGRRKRTA 100
>gi|239752588 PREDICTED: hypothetical protein XP_002348309, partial
[Homo sapiens]
Length = 327
Score = 107 bits (267), Expect = 7e-24
Identities = 54/72 (75%), Positives = 59/72 (81%)
Query: 123 RKRTAITGSQTALLLRAFEKDRFPGIPAREELARETGLPESRIQLWFQNRRARHWGQSGR 182
+KRTAIT QTALLLRAFEKD FPGI AR +LARETGLPESRI +WFQN ARH GQ+GR
Sbjct: 1 QKRTAITRPQTALLLRAFEKDHFPGIAARVQLARETGLPESRIHVWFQNHTARHPGQAGR 60
Query: 183 APTQASIRCNAA 194
AP Q + CNAA
Sbjct: 61 APAQDAGWCNAA 72
Score = 44.3 bits (103), Expect = 7e-05
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 54 TPSQSDALRACFERNLYPGIATKEQLAQGIDIPEPRVQIWFQN 96
T Q+ L FE++ +PGIA + QLA+ +PE R+ +WFQN
Sbjct: 7 TRPQTALLLRAFEKDHFPGIAARVQLARETGLPESRIHVWFQN 49
>gi|61969662 double homeobox A [Homo sapiens]
Length = 204
Score = 106 bits (264), Expect = 1e-23
Identities = 63/149 (42%), Positives = 84/149 (56%), Gaps = 11/149 (7%)
Query: 47 RRMILLSTPSQSDALRACFERNLYPGIATKEQLAQGIDIPEPRVQIWFQNERSCQ----- 101
RR T Q L F + YPG ATK++LA I+ E R+QIWFQN R+
Sbjct: 16 RRCRTKFTEEQLKILINTFNQKPYPGYATKQKLALEINTEESRIQIWFQNRRARHGFQKR 75
Query: 102 -----LRQHRRQSRPWPGRR-DPQKGRRKRTAITGSQTALLLRAFEKDRFPGIPAREELA 155
L + Q + PG ++ RR RT + SQ L++AF K+ +PGI +REELA
Sbjct: 76 PEAETLESSQSQGQDQPGVEFQSREARRCRTTYSASQLHTLIKAFMKNPYPGIDSREELA 135
Query: 156 RETGLPESRIQLWFQNRRARHWGQSGRAP 184
+E G+PESR+Q+WFQNRR+R Q R P
Sbjct: 136 KEIGVPESRVQIWFQNRRSRLLLQRKREP 164
>gi|239751129 PREDICTED: hypothetical protein XP_002347726 [Homo
sapiens]
Length = 345
Score = 97.4 bits (241), Expect = 7e-21
Identities = 54/141 (38%), Positives = 84/141 (59%), Gaps = 12/141 (8%)
Query: 56 SQSDALRACFERNLYPGIATKEQLAQGIDIPEPRVQIWFQNERSCQLR------------ 103
SQ D L++ F+ + +P A +EQLA+ I +PE +Q+WF+N R Q +
Sbjct: 25 SQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVKQRKLDYKCFSEKDQT 84
Query: 104 QHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPGIPAREELARETGLPES 163
Q QS+ P++ R+K+T IT +Q L++AFE++ FP I R++LA +TGL ES
Sbjct: 85 QGHDQSQHLTQEYLPKEARQKQTFITWTQKNRLVQAFERNPFPDIATRKKLAEQTGLQES 144
Query: 164 RIQLWFQNRRARHWGQSGRAP 184
RIQ+WFQ +R+ + +S P
Sbjct: 145 RIQMWFQKQRSLYLKKSRMEP 165
Score = 52.8 bits (125), Expect = 2e-07
Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 38 LPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEQLAQGIDIPEPRVQIWFQNE 97
LP+EA R+ T +Q + L FERN +P IAT+++LA+ + E R+Q+WFQ +
Sbjct: 98 LPKEA----RQKQTFITWTQKNRLVQAFERNPFPDIATRKKLAEQTGLQESRIQMWFQKQ 153
Query: 98 RSCQLRQHRRQ 108
RS L++ R +
Sbjct: 154 RSLYLKKSRME 164
Score = 51.6 bits (122), Expect = 4e-07
Identities = 25/53 (47%), Positives = 33/53 (62%)
Query: 123 RKRTAITGSQTALLLRAFEKDRFPGIPAREELARETGLPESRIQLWFQNRRAR 175
R R SQ +L F+ D FP ARE+LA+E G+PES IQ+WF+N R +
Sbjct: 17 RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVK 69
>gi|239745620 PREDICTED: hypothetical protein XP_002344158 [Homo
sapiens]
Length = 345
Score = 97.4 bits (241), Expect = 7e-21
Identities = 54/141 (38%), Positives = 84/141 (59%), Gaps = 12/141 (8%)
Query: 56 SQSDALRACFERNLYPGIATKEQLAQGIDIPEPRVQIWFQNERSCQLR------------ 103
SQ D L++ F+ + +P A +EQLA+ I +PE +Q+WF+N R Q +
Sbjct: 25 SQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVKQRKLDYKCFSEKDQT 84
Query: 104 QHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPGIPAREELARETGLPES 163
Q QS+ P++ R+K+T IT +Q L++AFE++ FP I R++LA +TGL ES
Sbjct: 85 QGHDQSQHLTQEYLPKEARQKQTFITWTQKNRLVQAFERNPFPDIATRKKLAEQTGLQES 144
Query: 164 RIQLWFQNRRARHWGQSGRAP 184
RIQ+WFQ +R+ + +S P
Sbjct: 145 RIQMWFQKQRSLYLKKSRMEP 165
Score = 52.8 bits (125), Expect = 2e-07
Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 38 LPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEQLAQGIDIPEPRVQIWFQNE 97
LP+EA R+ T +Q + L FERN +P IAT+++LA+ + E R+Q+WFQ +
Sbjct: 98 LPKEA----RQKQTFITWTQKNRLVQAFERNPFPDIATRKKLAEQTGLQESRIQMWFQKQ 153
Query: 98 RSCQLRQHRRQ 108
RS L++ R +
Sbjct: 154 RSLYLKKSRME 164
Score = 51.6 bits (122), Expect = 4e-07
Identities = 25/53 (47%), Positives = 33/53 (62%)
Query: 123 RKRTAITGSQTALLLRAFEKDRFPGIPAREELARETGLPESRIQLWFQNRRAR 175
R R SQ +L F+ D FP ARE+LA+E G+PES IQ+WF+N R +
Sbjct: 17 RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVK 69
>gi|20070107 orthodenticle homeobox 1 [Homo sapiens]
Length = 354
Score = 66.6 bits (161), Expect = 1e-11
Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 118 PQKGRRKRTAITGSQTALLLRAFEKDRFPGIPAREELARETGLPESRIQLWFQNRRA--R 175
P+K RR+RT T SQ +L F K R+P I REE+A + LPESR+Q+WF+NRRA R
Sbjct: 35 PRKQRRERTTFTRSQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCR 94
Query: 176 HWGQSGRAPTQASIRCNAAPI 196
QSG + ++P+
Sbjct: 95 QQQQSGSGTKSRPAKKKSSPV 115
Score = 52.0 bits (123), Expect = 3e-07
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Query: 47 RRMILLSTPSQSDALRACFERNLYPGIATKEQLAQGIDIPEPRVQIWFQNERS-CQLRQH 105
RR T SQ D L A F + YP I +E++A I++PE RVQ+WF+N R+ C+ +Q
Sbjct: 39 RRERTTFTRSQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQ 98
Query: 106 R---RQSRPWPGRRDP 118
+SRP + P
Sbjct: 99 SGSGTKSRPAKKKSSP 114
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.135 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,944,873
Number of Sequences: 37866
Number of extensions: 449773
Number of successful extensions: 1856
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 268
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1244
Number of HSP's gapped (non-prelim): 567
length of query: 197
length of database: 18,247,518
effective HSP length: 97
effective length of query: 100
effective length of database: 14,574,516
effective search space: 1457451600
effective search space used: 1457451600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.