Guide to the Human Genome
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Search of human proteins with 20373183

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|20373183 secretory carrier membrane protein 5 [Homo sapiens]
         (235 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|20373183 secretory carrier membrane protein 5 [Homo sapiens]       492   e-139
gi|17738287 secretory carrier membrane protein 4 [Homo sapiens]       300   9e-82
gi|116256358 secretory carrier membrane protein 1 [Homo sapiens]      231   5e-61
gi|5730031 secretory carrier membrane protein 2 [Homo sapiens]        229   2e-60
gi|16445421 secretory carrier membrane protein 3 isoform 2 [Homo...   229   2e-60
gi|16445419 secretory carrier membrane protein 3 isoform 1 [Homo...   229   2e-60
gi|145864459 diacylglycerol O-acyltransferase 1 [Homo sapiens]         28   6.8  
gi|57977305 G protein-coupled receptor 151 [Homo sapiens]              28   8.9  
gi|150010552 FK506 binding protein 15, 133kDa [Homo sapiens]           28   8.9  
gi|53933280 olfactory receptor, family 4, subfamily C, member 45...    28   8.9  

>gi|20373183 secretory carrier membrane protein 5 [Homo sapiens]
          Length = 235

 Score =  492 bits (1266), Expect = e-139
 Identities = 235/235 (100%), Positives = 235/235 (100%)

Query: 1   MAEKVNNFPPLPKFIPLKPCFYQDFEADIPPQHVSMTKRLYYLWMLNSVTLAVNLVGCLA 60
           MAEKVNNFPPLPKFIPLKPCFYQDFEADIPPQHVSMTKRLYYLWMLNSVTLAVNLVGCLA
Sbjct: 1   MAEKVNNFPPLPKFIPLKPCFYQDFEADIPPQHVSMTKRLYYLWMLNSVTLAVNLVGCLA 60

Query: 61  WLIGGGGATNFGLAFLWLILFTPCSYVCWFRPIYKAFKTDSSFSFMAFFFTFMAQLVISI 120
           WLIGGGGATNFGLAFLWLILFTPCSYVCWFRPIYKAFKTDSSFSFMAFFFTFMAQLVISI
Sbjct: 61  WLIGGGGATNFGLAFLWLILFTPCSYVCWFRPIYKAFKTDSSFSFMAFFFTFMAQLVISI 120

Query: 121 IQAVGIPGWGVCGWIATISFFGTNIGSAVVMLIPTVMFTVMAVFSFIALSMVHKFYRGSG 180
           IQAVGIPGWGVCGWIATISFFGTNIGSAVVMLIPTVMFTVMAVFSFIALSMVHKFYRGSG
Sbjct: 121 IQAVGIPGWGVCGWIATISFFGTNIGSAVVMLIPTVMFTVMAVFSFIALSMVHKFYRGSG 180

Query: 181 GSFSKAQEEWTTGAWKNPHVQQAAQNAAMGAAQGAMNQPQTQYSATPNYTYSNEM 235
           GSFSKAQEEWTTGAWKNPHVQQAAQNAAMGAAQGAMNQPQTQYSATPNYTYSNEM
Sbjct: 181 GSFSKAQEEWTTGAWKNPHVQQAAQNAAMGAAQGAMNQPQTQYSATPNYTYSNEM 235


>gi|17738287 secretory carrier membrane protein 4 [Homo sapiens]
          Length = 229

 Score =  300 bits (767), Expect = 9e-82
 Identities = 134/234 (57%), Positives = 167/234 (71%), Gaps = 7/234 (2%)

Query: 1   MAEKVNNFPPLPKFIPLKPCFYQDFEADIPPQHVSMTKRLYYLWMLNSVTLAVNLVGCLA 60
           M+EK NNFPPLPKFIP+KPCFYQ+F  +IP +H  + KR+Y LWM    TL VNL+ CLA
Sbjct: 1   MSEKENNFPPLPKFIPVKPCFYQNFSDEIPVEHQVLVKRIYRLWMFYCATLGVNLIACLA 60

Query: 61  WLIGGGGATNFGLAFLWLILFTPCSYVCWFRPIYKAFKTDSSFSFMAFFFTFMAQLVISI 120
           W IGGG  TNFGLAF+WL+LFTPC YVCWFRP+YKAF+ DSSF+FMAFFF F AQ V+++
Sbjct: 61  WWIGGGSGTNFGLAFVWLLLFTPCGYVCWFRPVYKAFRADSSFNFMAFFFIFGAQFVLTV 120

Query: 121 IQAVGIPGWGVCGWIATISFFGTNIGSAVVMLIPTVMFTVMAVFSFIALSMVHKFYRGSG 180
           IQA+G  GWG CGW++ I FF  + G+AVVML+P +MF+V A    IA+  VH+ YRG+G
Sbjct: 121 IQAIGFSGWGACGWLSAIGFFQYSPGAAVVMLLPAIMFSVSAAMMAIAIMKVHRIYRGAG 180

Query: 181 GSFSKAQEEWTTGAWKNPHVQQAAQNAAMGAAQGAMNQPQTQYSATPNYTYSNE 234
           GSF KAQ EW TG W+NP  ++A  N   G           +Y   P+Y  S +
Sbjct: 181 GSFQKAQTEWNTGTWRNPPSREAQYNNFSG-------NSLPEYPTVPSYPGSGQ 227


>gi|116256358 secretory carrier membrane protein 1 [Homo sapiens]
          Length = 338

 Score =  231 bits (588), Expect = 5e-61
 Identities = 103/211 (48%), Positives = 137/211 (64%), Gaps = 1/211 (0%)

Query: 6   NNFPPLPKFIPLKPCFYQDFEADIPPQHVSMTKRLYYLWMLNSVTLAVNLVGCLAWL-IG 64
           NN+PPLP   P+ PCFYQDF  DIP +     K +YYLWM ++VTL +N+ GCLAW  + 
Sbjct: 118 NNWPPLPSNFPVGPCFYQDFSVDIPVEFQKTVKLMYYLWMFHAVTLFLNIFGCLAWFCVD 177

Query: 65  GGGATNFGLAFLWLILFTPCSYVCWFRPIYKAFKTDSSFSFMAFFFTFMAQLVISIIQAV 124
              A +FGL+ LW +LFTPCS+VCW+RP+Y AF++DSSF F  FFF ++ Q  + ++QA 
Sbjct: 178 SARAVDFGLSILWFLLFTPCSFVCWYRPLYGAFRSDSSFRFFVFFFVYICQFAVHVLQAA 237

Query: 125 GIPGWGVCGWIATISFFGTNIGSAVVMLIPTVMFTVMAVFSFIALSMVHKFYRGSGGSFS 184
           G   WG CGWI++++    NI   ++M+I   +FT  AV S +    VH  YR +G SF 
Sbjct: 238 GFHNWGNCGWISSLTGLNQNIPVGIMMIIIAALFTASAVISLVMFKKVHGLYRTTGASFE 297

Query: 185 KAQEEWTTGAWKNPHVQQAAQNAAMGAAQGA 215
           KAQ+E+ TG   N  VQ AA NAA  AA  A
Sbjct: 298 KAQQEFATGVMSNKTVQTAAANAASTAASSA 328


>gi|5730031 secretory carrier membrane protein 2 [Homo sapiens]
          Length = 329

 Score =  229 bits (584), Expect = 2e-60
 Identities = 107/211 (50%), Positives = 144/211 (68%), Gaps = 2/211 (0%)

Query: 6   NNFPPLPKFIPLKPCFYQDFEADIPPQHVSMTKRLYYLWMLNSVTLAVNLVGCLAWLIGG 65
           NN+PPLP + P+KPCFYQDF  +IP  +  + K LYYLWML+SVTL +NL+ CLAW  G 
Sbjct: 118 NNWPPLPSWCPVKPCFYQDFSTEIPADYQRICKMLYYLWMLHSVTLFLNLLACLAWFSGN 177

Query: 66  GG-ATNFGLAFLWLILFTPCSYVCWFRPIYKAFKTDSSFSFMAFFFTFMAQLVISIIQAV 124
                +FGL+ LW ++FTPC+++CW+RPIYKAF++D+SFSF  FFF F  Q+ I IIQ V
Sbjct: 178 SSKGVDFGLSILWFLIFTPCAFLCWYRPIYKAFRSDNSFSFFVFFFVFFCQIGIYIIQLV 237

Query: 125 GIPGWGVCGWIATISFFGT-NIGSAVVMLIPTVMFTVMAVFSFIALSMVHKFYRGSGGSF 183
           GIPG G  GWIA +S     ++  +V+M++    FT+ AV S   L  VH  YR +G SF
Sbjct: 238 GIPGLGDSGWIAALSTLDNHSLAISVIMMVVAGFFTLCAVLSVFLLQRVHSLYRRTGASF 297

Query: 184 SKAQEEWTTGAWKNPHVQQAAQNAAMGAAQG 214
            +AQEE++ G + +    +AA +AA GA QG
Sbjct: 298 QQAQEEFSQGIFSSRTFHRAASSAAQGAFQG 328


>gi|16445421 secretory carrier membrane protein 3 isoform 2 [Homo
           sapiens]
          Length = 321

 Score =  229 bits (584), Expect = 2e-60
 Identities = 101/219 (46%), Positives = 145/219 (66%), Gaps = 1/219 (0%)

Query: 2   AEKVNNFPPLPKFIPLKPCFYQDFEADIPPQHVSMTKRLYYLWMLNSVTLAVNLVGCLA- 60
           A + NN+PPLP F P++PCF+QD   +IP +       +YYLWM +++ L +N + CLA 
Sbjct: 103 ATRQNNWPPLPSFCPVQPCFFQDISMEIPQEFQKTVSTMYYLWMCSTLALLLNFLACLAS 162

Query: 61  WLIGGGGATNFGLAFLWLILFTPCSYVCWFRPIYKAFKTDSSFSFMAFFFTFMAQLVISI 120
           + +       FGL+ LW++LFTPCS+VCW+RP+YKAF++DSSF+F  FFF F  Q V+ +
Sbjct: 163 FCVETNNGAGFGLSILWVLLFTPCSFVCWYRPMYKAFRSDSSFNFFVFFFIFFVQDVLFV 222

Query: 121 IQAVGIPGWGVCGWIATISFFGTNIGSAVVMLIPTVMFTVMAVFSFIALSMVHKFYRGSG 180
           +QA+GIPGWG  GWI+ +     N   +V+ML+  ++FT +AV   + L  +H  YR +G
Sbjct: 223 LQAIGIPGWGFSGWISALVVPKGNTAVSVLMLLVALLFTGIAVLGIVMLKRIHSLYRRTG 282

Query: 181 GSFSKAQEEWTTGAWKNPHVQQAAQNAAMGAAQGAMNQP 219
            SF KAQ+E+  G + NP V+ AA NAA GAA+ A   P
Sbjct: 283 ASFQKAQQEFAAGVFSNPAVRTAAANAAAGAAENAFRAP 321


>gi|16445419 secretory carrier membrane protein 3 isoform 1 [Homo
           sapiens]
          Length = 347

 Score =  229 bits (584), Expect = 2e-60
 Identities = 101/219 (46%), Positives = 145/219 (66%), Gaps = 1/219 (0%)

Query: 2   AEKVNNFPPLPKFIPLKPCFYQDFEADIPPQHVSMTKRLYYLWMLNSVTLAVNLVGCLA- 60
           A + NN+PPLP F P++PCF+QD   +IP +       +YYLWM +++ L +N + CLA 
Sbjct: 129 ATRQNNWPPLPSFCPVQPCFFQDISMEIPQEFQKTVSTMYYLWMCSTLALLLNFLACLAS 188

Query: 61  WLIGGGGATNFGLAFLWLILFTPCSYVCWFRPIYKAFKTDSSFSFMAFFFTFMAQLVISI 120
           + +       FGL+ LW++LFTPCS+VCW+RP+YKAF++DSSF+F  FFF F  Q V+ +
Sbjct: 189 FCVETNNGAGFGLSILWVLLFTPCSFVCWYRPMYKAFRSDSSFNFFVFFFIFFVQDVLFV 248

Query: 121 IQAVGIPGWGVCGWIATISFFGTNIGSAVVMLIPTVMFTVMAVFSFIALSMVHKFYRGSG 180
           +QA+GIPGWG  GWI+ +     N   +V+ML+  ++FT +AV   + L  +H  YR +G
Sbjct: 249 LQAIGIPGWGFSGWISALVVPKGNTAVSVLMLLVALLFTGIAVLGIVMLKRIHSLYRRTG 308

Query: 181 GSFSKAQEEWTTGAWKNPHVQQAAQNAAMGAAQGAMNQP 219
            SF KAQ+E+  G + NP V+ AA NAA GAA+ A   P
Sbjct: 309 ASFQKAQQEFAAGVFSNPAVRTAAANAAAGAAENAFRAP 347


>gi|145864459 diacylglycerol O-acyltransferase 1 [Homo sapiens]
          Length = 488

 Score = 28.1 bits (61), Expect = 6.8
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 4/47 (8%)

Query: 34  VSMTKRLYYLWMLNSVTLAVNLVGCLAWLIGGGGATNFGLAFLWLIL 80
           VS+  R++ LW    +   + L    AW +G     N+G A +WL L
Sbjct: 419 VSVPLRMFRLWAFTGMMAQIPL----AWFVGRFFQGNYGNAAVWLSL 461


>gi|57977305 G protein-coupled receptor 151 [Homo sapiens]
          Length = 419

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 24/100 (24%), Positives = 38/100 (38%), Gaps = 8/100 (8%)

Query: 116 LVISIIQAV-GIPGWGVCGWIATISFFGTNIGSAVVMLIPTVMFTVMAVFSFIALSMVHK 174
           L I+II A+  +P W    W+  +   G       + L   +MF++ +    I L M  +
Sbjct: 253 LSIAIISALLWLPEWVAWLWVWHLKAAGPAPPQGFIALSQVLMFSISSANPLIFLVMSEE 312

Query: 175 FYRGSGGSFSKAQEEWTTGAWKNPHVQQAAQNAAMGAAQG 214
           F  G  G        W     K P     +Q    G ++G
Sbjct: 313 FREGLKG-------VWKWMITKKPPTVSESQETPAGNSEG 345


>gi|150010552 FK506 binding protein 15, 133kDa [Homo sapiens]
          Length = 1219

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 16/74 (21%), Positives = 37/74 (50%), Gaps = 1/74 (1%)

Query: 155 TVMFTVMAVFSFIALSMVHKFYRGSGGSFSKAQEEWTTGAWKNPHVQQAAQNAAMGAAQG 214
           T++ T+M     + L ++++  +    S S+ +EE      + P  +Q+A +A+ G  Q 
Sbjct: 912 TILGTIMNTIKMVTLQLLNQQEQEKEESSSEEEEEKAEERPRRPSQEQSA-SASSGQPQA 970

Query: 215 AMNQPQTQYSATPN 228
            +N+ + +    P+
Sbjct: 971 PLNRERPESPMVPS 984


>gi|53933280 olfactory receptor, family 4, subfamily C, member 45
           [Homo sapiens]
          Length = 306

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 2/48 (4%)

Query: 75  FLWLILFTPCSYVCWFRPIYKAFKTDSSFSFMAFFFTFMAQLVISIIQ 122
           F  ++ F PCSY+ + RP+  +F TD + +     FT M   +I  ++
Sbjct: 240 FTVILFFVPCSYL-YLRPL-TSFPTDKAVTVFCTLFTPMLNPLIYTVK 285


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.327    0.137    0.454 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,632,324
Number of Sequences: 37866
Number of extensions: 325100
Number of successful extensions: 939
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 928
Number of HSP's gapped (non-prelim): 10
length of query: 235
length of database: 18,247,518
effective HSP length: 99
effective length of query: 136
effective length of database: 14,498,784
effective search space: 1971834624
effective search space used: 1971834624
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 60 (27.7 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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