Search of human proteins with 20304127

Search of human proteins with 20304127

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|20304127 patatin-like phospholipase domain containing 5
[Homo sapiens]
         (429 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|20304127 patatin-like phospholipase domain containing 5 [Homo...   897   0.0  
gi|17196626 patatin-like phospholipase domain containing 3 [Homo...   281   8e-76
gi|32698724 patatin-like phospholipase domain containing 2 [Homo...   267   1e-71
gi|238776840 patatin-like phospholipase domain containing 1 isof...   183   3e-46
gi|215422355 patatin-like phospholipase domain containing 4 [Hom...   135   7e-32
gi|42415471 patatin-like phospholipase domain containing 4 [Homo...   135   7e-32
gi|224593249 patatin-like phospholipase domain containing 1 isof...   134   1e-31
gi|224589138 patatin-like phospholipase domain containing 1 isof...   128   9e-30
gi|239755457 PREDICTED: similar to patatin-like phospholipase do...    66   7e-11
gi|122937229 zinc finger protein 629 [Homo sapiens]                    34   0.29 
gi|239757144 PREDICTED: hypothetical protein [Homo sapiens]            30   3.2  
gi|239751663 PREDICTED: hypothetical protein [Homo sapiens]            30   3.2  
gi|239746169 PREDICTED: hypothetical protein [Homo sapiens]            30   3.2  
gi|55770876 notch4 preproprotein [Homo sapiens]                        30   4.2  
gi|13775238 plasmalemma vesicle associated protein [Homo sapiens]      29   7.2  

>gi|20304127 patatin-like phospholipase domain containing 5 [Homo
           sapiens]
          Length = 429

 Score =  897 bits (2318), Expect = 0.0
 Identities = 429/429 (100%), Positives = 429/429 (100%)

Query: 1   MGFLEEEGRWNLSFSGAGYLGAHHVGATECLRQRAPRLLQGARRIYGSSSGALNAVSIVC 60
           MGFLEEEGRWNLSFSGAGYLGAHHVGATECLRQRAPRLLQGARRIYGSSSGALNAVSIVC
Sbjct: 1   MGFLEEEGRWNLSFSGAGYLGAHHVGATECLRQRAPRLLQGARRIYGSSSGALNAVSIVC 60

Query: 61  GKSVDFCCSHLLGMVGQLERLSLSILHPAYAPIEHVKQQLQDALPPDAHVLASQRLGISL 120
           GKSVDFCCSHLLGMVGQLERLSLSILHPAYAPIEHVKQQLQDALPPDAHVLASQRLGISL
Sbjct: 61  GKSVDFCCSHLLGMVGQLERLSLSILHPAYAPIEHVKQQLQDALPPDAHVLASQRLGISL 120

Query: 121 TRWPDGRNFLVTDFATCDELIQALVCTLYFPFYCGLIPPEFRGERYIDGALSNNLPFADC 180
           TRWPDGRNFLVTDFATCDELIQALVCTLYFPFYCGLIPPEFRGERYIDGALSNNLPFADC
Sbjct: 121 TRWPDGRNFLVTDFATCDELIQALVCTLYFPFYCGLIPPEFRGERYIDGALSNNLPFADC 180

Query: 181 PSTITVSPFHGTVDICPQSTSPNLHELNVFNFSFQISTENFFLGLICLIPPSLEVVADNC 240
           PSTITVSPFHGTVDICPQSTSPNLHELNVFNFSFQISTENFFLGLICLIPPSLEVVADNC
Sbjct: 181 PSTITVSPFHGTVDICPQSTSPNLHELNVFNFSFQISTENFFLGLICLIPPSLEVVADNC 240

Query: 241 RQGYLDALRFLERRGLTKEPVLWTLVSKEPPAPADGNWDAGCDQRWKGGLSLNWKVPHVQ 300
           RQGYLDALRFLERRGLTKEPVLWTLVSKEPPAPADGNWDAGCDQRWKGGLSLNWKVPHVQ
Sbjct: 241 RQGYLDALRFLERRGLTKEPVLWTLVSKEPPAPADGNWDAGCDQRWKGGLSLNWKVPHVQ 300

Query: 301 VKDVPNFEQLSPELEAALKKACTRDPSRWARFWHSGPGQVLTYLLLPCTLPFEYIYFRSR 360
           VKDVPNFEQLSPELEAALKKACTRDPSRWARFWHSGPGQVLTYLLLPCTLPFEYIYFRSR
Sbjct: 301 VKDVPNFEQLSPELEAALKKACTRDPSRWARFWHSGPGQVLTYLLLPCTLPFEYIYFRSR 360

Query: 361 RLVVWLPDVPADLWWMQGLLRNMALEVFSRTKAQLLGPISPPATRVLETSPLQPQIAPHR 420
           RLVVWLPDVPADLWWMQGLLRNMALEVFSRTKAQLLGPISPPATRVLETSPLQPQIAPHR
Sbjct: 361 RLVVWLPDVPADLWWMQGLLRNMALEVFSRTKAQLLGPISPPATRVLETSPLQPQIAPHR 420

Query: 421 EELGPTHQA 429
           EELGPTHQA
Sbjct: 421 EELGPTHQA 429


>gi|17196626 patatin-like phospholipase domain containing 3 [Homo
           sapiens]
          Length = 481

 Score =  281 bits (719), Expect = 8e-76
 Identities = 158/413 (38%), Positives = 235/413 (56%), Gaps = 21/413 (5%)

Query: 5   EEEGRWNLSFSGAGYLGAHHVGATECLRQRAPRLLQGARRIYGSSSGALNAVSIVCGKSV 64
           + E  W+LSF+G G+LG +HVGAT CL + AP LL+ AR ++G+S+GAL+ V ++ G  +
Sbjct: 3   DAERGWSLSFAGCGFLGFYHVGATRCLSEHAPHLLRDARMLFGASAGALHCVGVLSGIPL 62

Query: 65  DFCCSHLLGMVGQLERLSLSILHPAYAPIEHVKQQLQDALPPDAHVLASQRLGISLTRWP 124
           +     L  +V +    ++ I HP++   + ++Q L   LP + H L S ++GISLTR  
Sbjct: 63  EQTLQVLSDLVRKARSRNIGIFHPSFNLSKFLRQGLCKCLPANVHQLISGKIGISLTRVS 122

Query: 125 DGRNFLVTDFATCDELIQALVCTLYFPFYCGLIPPEFRGERYIDGALSNNLPFADCPSTI 184
           DG N LV+DF + DE++ ALVC+ + PFY GLIPP FRG RY+DG +S+N+PF D  +TI
Sbjct: 123 DGENVLVSDFRSKDEVVDALVCSCFIPFYSGLIPPSFRGVRYVDGGVSDNVPFIDAKTTI 182

Query: 185 TVSPFHGTVDICPQSTSPNLHELNVFNFSFQISTENFFLGLICLIPPSLEVVADNCRQGY 244
           TVSPF+G  DICP+  S N   +++   S ++ T N +L     +PP L+V+ + C +GY
Sbjct: 183 TVSPFYGEYDICPKVKSTNFLHVDITKLSLRLCTGNLYLLSRAFVPPDLKVLGEICLRGY 242

Query: 245 LDALRFLERRGLTKEPVLWTLVSKE--PPAPADGNW----------DAGCDQRWKGGLSL 292
           LDA RFLE +G+   P      S E   P  A  +W           A    R +G   L
Sbjct: 243 LDAFRFLEEKGICNRPQPGLKSSSEGMDPEVAMPSWANMSLDSSPESAALAVRLEGDELL 302

Query: 293 NWKVPHVQVKDVPNFEQLSPELEAALKKACTRDPSRWARFWHSGPGQVLTYLLLPCTLPF 352
           +     +   D    + LSP L  AL +         ++  +  P ++++Y++LPCTLP 
Sbjct: 303 DHLRLSILPWDESILDTLSPRLATALSEEMKDKGGYMSKICNLLPIRIMSYVMLPCTLPV 362

Query: 353 EYIYFRSRRLVVWLPDVPADLWWMQGLLRNMALEVFSRTKAQLLGPISPPATR 405
           E      +RLV WLPD+P D+ W+Q     +  +VF+R    LL     PA+R
Sbjct: 363 ESAIAIVQRLVTWLPDMPDDVLWLQW----VTSQVFTRVLMCLL-----PASR 406


>gi|32698724 patatin-like phospholipase domain containing 2 [Homo
           sapiens]
          Length = 504

 Score =  267 bits (683), Expect = 1e-71
 Identities = 152/390 (38%), Positives = 213/390 (54%), Gaps = 10/390 (2%)

Query: 7   EGRWNLSFSGAGYLGAHHVGATECLRQRAPRLLQGARRIYGSSSGALNAVSIVCGKSVDF 66
           E  WN+SF+G G+LG ++VG   CLR+ AP L+  A  IYG+S+GAL A ++V G  +  
Sbjct: 5   EKTWNISFAGCGFLGVYYVGVASCLREHAPFLVANATHIYGASAGALTATALVTGVCLGE 64

Query: 67  CCSHLLGMVGQLERLSLSILHPAYAPIEHVKQQLQDALPPDAHVLASQRLGISLTRWPDG 126
             +  + +  +  +  L  LHP++  ++ ++  L   LP D+H  AS RLGISLTR  DG
Sbjct: 65  AGAKFIEVSKEARKRFLGPLHPSFNLVKIIRSFLLKVLPADSHEHASGRLGISLTRVSDG 124

Query: 127 RNFLVTDFATCDELIQALVCTLYFPFYCGLIPPEFRGERYIDGALSNNLPFADCPSTITV 186
            N +++ F + DELIQA VC+ + P YCGLIPP  +G RY+DG +S+NLP  +  +TITV
Sbjct: 125 ENVIISHFNSKDELIQANVCSGFIPVYCGLIPPSLQGVRYVDGGISDNLPLYELKNTITV 184

Query: 187 SPFHGTVDICPQSTSPNLHELNVFNFSFQISTENFFLGLICLIPPSLEVVADNCRQGYLD 246
           SPF G  DICPQ +S N+HEL V N S Q +  N +     L PP   V+ + C+QGY D
Sbjct: 185 SPFSGESDICPQDSSTNIHELRVTNTSIQFNLRNLYRLSKALFPPEPLVLREMCKQGYRD 244

Query: 247 ALRFLERRGLTKEP-VLWTLVSKEPPAPADGNWDAGCDQRWKGGLSLNWKVPHVQVKDVP 305
            LRFL+R GL   P  L  L    P  P D   D   +       S      H+      
Sbjct: 245 GLRFLQRNGLLNRPNPLLALPPARPHGPEDK--DQAVESAQAEDYSQLPGEDHI------ 296

Query: 306 NFEQLSPELEAALKKACTRDPSRWARFWHSGPGQVLTYLLLPCTLPFEYIYFRSRRLVVW 365
             E L   L  AL +AC           +  P ++ T +++P TLP E     + RL+ W
Sbjct: 297 -LEHLPARLNEALLEACVEPTDLLTTLSNMLPVRLATAMMVPYTLPLESALSFTIRLLEW 355

Query: 366 LPDVPADLWWMQGLLRNMALEVFSRTKAQL 395
           LPDVP D+ WM+    ++   +  R K +L
Sbjct: 356 LPDVPEDIRWMKEQTGSICQYLVMRAKRKL 385


>gi|238776840 patatin-like phospholipase domain containing 1 isoform
           3 [Homo sapiens]
          Length = 532

 Score =  183 bits (464), Expect = 3e-46
 Identities = 96/243 (39%), Positives = 143/243 (58%)

Query: 11  NLSFSGAGYLGAHHVGATECLRQRAPRLLQGARRIYGSSSGALNAVSIVCGKSVDFCCSH 70
           ++SFSG+G+L  +  GA + LR  APR+L+ A R  G+S+GA+ A   +CG  +D     
Sbjct: 15  SISFSGSGFLSFYQAGAVDALRDLAPRMLETAHRFAGTSAGAVIAALAICGIEMDEYLRV 74

Query: 71  LLGMVGQLERLSLSILHPAYAPIEHVKQQLQDALPPDAHVLASQRLGISLTRWPDGRNFL 130
           L   V ++++  L  L P+   ++ ++Q L   LP D++ + + +L +SLTR  DG N +
Sbjct: 75  LNVGVAEVKKSFLGPLSPSCKMVQMMRQFLYRVLPEDSYKVTTGKLHVSLTRLTDGENVV 134

Query: 131 VTDFATCDELIQALVCTLYFPFYCGLIPPEFRGERYIDGALSNNLPFADCPSTITVSPFH 190
           V++F + +ELI+AL C+ + P YCGLIPP +RG RYIDG  +   P A     IT+S F 
Sbjct: 135 VSEFTSKEELIEALYCSCFVPVYCGLIPPTYRGVRYIDGGFTGMQPCAFWTDAITISTFS 194

Query: 191 GTVDICPQSTSPNLHELNVFNFSFQISTENFFLGLICLIPPSLEVVADNCRQGYLDALRF 250
           G  DICP+      H+  +FN SFQ S EN       L PP L ++ D   +GY DA+ +
Sbjct: 195 GQQDICPRDCPAIFHDFRMFNCSFQFSLENIARMTHALFPPDLVILHDYYYRGYEDAVLY 254

Query: 251 LER 253
           L R
Sbjct: 255 LRR 257


>gi|215422355 patatin-like phospholipase domain containing 4 [Homo
           sapiens]
          Length = 253

 Score =  135 bits (340), Expect = 7e-32
 Identities = 74/242 (30%), Positives = 127/242 (52%), Gaps = 1/242 (0%)

Query: 11  NLSFSGAGYLGAHHVGATECLRQRAPRLLQGARRIYGSSSGALNA-VSIVCGKSVDFCCS 69
           NLSF+  G+LG +H+GA   L +   +L++  +   G+S+G+L A V +   + ++ C  
Sbjct: 5   NLSFAACGFLGIYHLGAASALCRHGKKLVKDVKAFAGASAGSLVASVLLTAPEKIEECNQ 64

Query: 70  HLLGMVGQLERLSLSILHPAYAPIEHVKQQLQDALPPDAHVLASQRLGISLTRWPDGRNF 129
                  ++ R S   + P Y  +  ++  ++  LPP AH LA  RL +S+T      N 
Sbjct: 65  FTYKFAEEIRRQSFGAVTPGYDFMARLRSGMESILPPSAHELAQNRLHVSITNAKTRENH 124

Query: 130 LVTDFATCDELIQALVCTLYFPFYCGLIPPEFRGERYIDGALSNNLPFADCPSTITVSPF 189
           LV+ F++ ++LI+ L+ + + P Y GL   E++G++++DG L+N LP      T+T+SPF
Sbjct: 125 LVSTFSSREDLIKVLLASSFVPIYAGLKLVEYKGQKWVDGGLTNALPILPVGRTVTISPF 184

Query: 190 HGTVDICPQSTSPNLHELNVFNFSFQISTENFFLGLICLIPPSLEVVADNCRQGYLDALR 249
            G +DI PQ        +N+      +S  N       L PPS   +    + G+ D ++
Sbjct: 185 SGRLDISPQDKGQLDLYVNIAKQDIMLSLANLVRLNQALFPPSKRKMESLYQCGFDDTVK 244

Query: 250 FL 251
           FL
Sbjct: 245 FL 246


>gi|42415471 patatin-like phospholipase domain containing 4 [Homo
           sapiens]
          Length = 253

 Score =  135 bits (340), Expect = 7e-32
 Identities = 74/242 (30%), Positives = 127/242 (52%), Gaps = 1/242 (0%)

Query: 11  NLSFSGAGYLGAHHVGATECLRQRAPRLLQGARRIYGSSSGALNA-VSIVCGKSVDFCCS 69
           NLSF+  G+LG +H+GA   L +   +L++  +   G+S+G+L A V +   + ++ C  
Sbjct: 5   NLSFAACGFLGIYHLGAASALCRHGKKLVKDVKAFAGASAGSLVASVLLTAPEKIEECNQ 64

Query: 70  HLLGMVGQLERLSLSILHPAYAPIEHVKQQLQDALPPDAHVLASQRLGISLTRWPDGRNF 129
                  ++ R S   + P Y  +  ++  ++  LPP AH LA  RL +S+T      N 
Sbjct: 65  FTYKFAEEIRRQSFGAVTPGYDFMARLRSGMESILPPSAHELAQNRLHVSITNAKTRENH 124

Query: 130 LVTDFATCDELIQALVCTLYFPFYCGLIPPEFRGERYIDGALSNNLPFADCPSTITVSPF 189
           LV+ F++ ++LI+ L+ + + P Y GL   E++G++++DG L+N LP      T+T+SPF
Sbjct: 125 LVSTFSSREDLIKVLLASSFVPIYAGLKLVEYKGQKWVDGGLTNALPILPVGRTVTISPF 184

Query: 190 HGTVDICPQSTSPNLHELNVFNFSFQISTENFFLGLICLIPPSLEVVADNCRQGYLDALR 249
            G +DI PQ        +N+      +S  N       L PPS   +    + G+ D ++
Sbjct: 185 SGRLDISPQDKGQLDLYVNIAKQDIMLSLANLVRLNQALFPPSKRKMESLYQCGFDDTVK 244

Query: 250 FL 251
           FL
Sbjct: 245 FL 246


>gi|224593249 patatin-like phospholipase domain containing 1 isoform
           1 [Homo sapiens]
          Length = 437

 Score =  134 bits (338), Expect = 1e-31
 Identities = 67/161 (41%), Positives = 96/161 (59%)

Query: 93  IEHVKQQLQDALPPDAHVLASQRLGISLTRWPDGRNFLVTDFATCDELIQALVCTLYFPF 152
           ++ ++Q L   LP D++ + + +L +SLTR  DG N +V++F + +ELI+AL C+ + P 
Sbjct: 2   VQMMRQFLYRVLPEDSYKVTTGKLHVSLTRLTDGENVVVSEFTSKEELIEALYCSCFVPV 61

Query: 153 YCGLIPPEFRGERYIDGALSNNLPFADCPSTITVSPFHGTVDICPQSTSPNLHELNVFNF 212
           YCGLIPP +RG RYIDG  +   P A     IT+S F G  DICP+      H+  +FN 
Sbjct: 62  YCGLIPPTYRGVRYIDGGFTGMQPCAFWTDAITISTFSGQQDICPRDCPAIFHDFRMFNC 121

Query: 213 SFQISTENFFLGLICLIPPSLEVVADNCRQGYLDALRFLER 253
           SFQ S EN       L PP L ++ D   +GY DA+ +L R
Sbjct: 122 SFQFSLENIARMTHALFPPDLVILHDYYYRGYEDAVLYLRR 162


>gi|224589138 patatin-like phospholipase domain containing 1 isoform
           2 [Homo sapiens]
          Length = 446

 Score =  128 bits (322), Expect = 9e-30
 Identities = 67/170 (39%), Positives = 97/170 (57%), Gaps = 9/170 (5%)

Query: 93  IEHVKQQLQDALPPDAHVLASQRLGISLTRWPDGRNFLVTDFATCDELIQALVCTLYFPF 152
           ++ ++Q L   LP D++ + + +L +SLTR  DG N +V++F + +ELI+AL C+ + P 
Sbjct: 2   VQMMRQFLYRVLPEDSYKVTTGKLHVSLTRLTDGENVVVSEFTSKEELIEALYCSCFVPV 61

Query: 153 YCGLIPPEFRG---------ERYIDGALSNNLPFADCPSTITVSPFHGTVDICPQSTSPN 203
           YCGLIPP +RG         +RYIDG  +   P A     IT+S F G  DICP+     
Sbjct: 62  YCGLIPPTYRGVWAFLTLPPQRYIDGGFTGMQPCAFWTDAITISTFSGQQDICPRDCPAI 121

Query: 204 LHELNVFNFSFQISTENFFLGLICLIPPSLEVVADNCRQGYLDALRFLER 253
            H+  +FN SFQ S EN       L PP L ++ D   +GY DA+ +L R
Sbjct: 122 FHDFRMFNCSFQFSLENIARMTHALFPPDLVILHDYYYRGYEDAVLYLRR 171


>gi|239755457 PREDICTED: similar to patatin-like phospholipase
          domain containing 2 [Homo sapiens]
          Length = 226

 Score = 65.9 bits (159), Expect = 7e-11
 Identities = 28/55 (50%), Positives = 39/55 (70%)

Query: 7  EGRWNLSFSGAGYLGAHHVGATECLRQRAPRLLQGARRIYGSSSGALNAVSIVCG 61
          E  WN+SF+G G+LG ++VG   CLR+ AP L+  A  IYG+S+GAL A ++V G
Sbjct: 5  EKTWNISFAGCGFLGVYYVGVASCLREHAPFLVANATHIYGASAGALTATALVTG 59



 Score = 30.4 bits (67), Expect = 3.2
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 362 LVVWLPDVPADLWWMQGLLRNMALEVFSRTKAQL 395
           L+ WLPDVP D+ WM+    ++   +  R K +L
Sbjct: 74  LLEWLPDVPEDIRWMKEQTGSICQYLVMRAKRKL 107


>gi|122937229 zinc finger protein 629 [Homo sapiens]
          Length = 869

 Score = 33.9 bits (76), Expect = 0.29
 Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 9/72 (12%)

Query: 269 EPPAP----ADGNWDAGCDQRWKGGLSLNWKVPHVQVKDVPNFEQLSPELEAALKK---- 320
           +PPAP       +W   C+  W+ G    W  P V   + P+  +L     A  +K    
Sbjct: 93  DPPAPEVVPTPSDWTKACEASWQWGALTTWNSPPVVPANEPSLRELVQGRPAGAEKPYIC 152

Query: 321 -ACTRDPSRWAR 331
             C +  S+W++
Sbjct: 153 NECGKSFSQWSK 164


>gi|239757144 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 174

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)

Query: 330 ARFWHSG-PGQVLTYLLLPCTLPFEYIYF 357
           A F+H    G++ T+ LLPCT P  ++YF
Sbjct: 13  AEFYHRHRTGELCTFSLLPCTWPTRHLYF 41


>gi|239751663 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 174

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)

Query: 330 ARFWHSG-PGQVLTYLLLPCTLPFEYIYF 357
           A F+H    G++ T+ LLPCT P  ++YF
Sbjct: 13  AEFYHRHRTGELCTFSLLPCTWPTRHLYF 41


>gi|239746169 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 174

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)

Query: 330 ARFWHSG-PGQVLTYLLLPCTLPFEYIYF 357
           A F+H    G++ T+ LLPCT P  ++YF
Sbjct: 13  AEFYHRHRTGELCTFSLLPCTWPTRHLYF 41


>gi|55770876 notch4 preproprotein [Homo sapiens]
          Length = 2003

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 41/172 (23%), Positives = 59/172 (34%), Gaps = 28/172 (16%)

Query: 94  EHVKQQLQDALPPD-------AHVLASQRLGISLTRWPDGRNFLVTDFATCDELIQALVC 146
           E  + +L+D  PP         H+ AS R   S      G    + DF + +  +   VC
Sbjct: 112 ERCQAKLEDPCPPSFCSKRGRCHIQASGRPQCSCMPGWTGEQCQLRDFCSANPCVNGGVC 171

Query: 147 TLYFPFYCGLIPPEFRG---ERYIDGALSNNLPFADCPSTITVSPFHGTVD-ICPQSTSP 202
              +P      PP F G   ER ++    +  P   CP   +     G+   +CP     
Sbjct: 172 LATYPQIQCHCPPGFEGHACERDVNECFQDPGP---CPKGTSCHNTLGSFQCLCPVGQEG 228

Query: 203 NLHELNV---------FNFSFQISTENFFLGLICLIPPSL-----EVVADNC 240
              EL              + Q+  E      +CL PP       EV  DNC
Sbjct: 229 PRCELRAGPCPPRGCSNGGTCQLMPEKDSTFHLCLCPPGFIGPDCEVNPDNC 280


>gi|13775238 plasmalemma vesicle associated protein [Homo sapiens]
          Length = 442

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 14/39 (35%), Positives = 22/39 (56%)

Query: 376 MQGLLRNMALEVFSRTKAQLLGPISPPATRVLETSPLQP 414
           M+  +RN AL+   +TK+Q + P+S P   V    P+ P
Sbjct: 377 MELAIRNSALDTCIKTKSQPMMPVSRPMGPVPNPQPIDP 415


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.139    0.455 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,841,041
Number of Sequences: 37866
Number of extensions: 889891
Number of successful extensions: 1824
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1804
Number of HSP's gapped (non-prelim): 16
length of query: 429
length of database: 18,247,518
effective HSP length: 105
effective length of query: 324
effective length of database: 14,271,588
effective search space: 4623994512
effective search space used: 4623994512
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.