BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|197100773 arginyl-tRNA synthetase 2, mitochondrial precursor [Homo sapiens] (578 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|197100773 arginyl-tRNA synthetase 2, mitochondrial precursor ... 1141 0.0 gi|15149476 arginyl-tRNA synthetase [Homo sapiens] 205 1e-52 gi|38146111 DALR anticodon binding domain containing 3 isoform 2... 33 0.55 gi|58331230 DALR anticodon binding domain containing 3 isoform 1... 33 0.55 gi|118498343 ATPase, Ca++ transporting, type 2C, member 2 [Homo ... 32 1.6 gi|24797151 dimethylglycine dehydrogenase precursor [Homo sapiens] 31 3.6 gi|7661872 leucyl-tRNA synthetase 2, mitochondrial precursor [Ho... 30 4.6 gi|224451124 neurobeachin-like 1 isoform 3 [Homo sapiens] 30 4.6 gi|154240744 neurobeachin-like 1 isoform 2 [Homo sapiens] 30 4.6 gi|149944613 neurobeachin-like 1 isoform 1 [Homo sapiens] 30 4.6 gi|21361863 stonin 2 [Homo sapiens] 30 4.6 gi|22749377 DnaJ (Hsp40) homolog, subfamily C, member 18 [Homo s... 30 6.1 gi|149192841 zinc finger protein 527 [Homo sapiens] 30 7.9 >gi|197100773 arginyl-tRNA synthetase 2, mitochondrial precursor [Homo sapiens] Length = 578 Score = 1141 bits (2952), Expect = 0.0 Identities = 578/578 (100%), Positives = 578/578 (100%) Query: 1 MACGFRRAIACQLSRVLNLPPENLITSISAVPISQKEEVADFQLSVDSLLEKDNDHSRPD 60 MACGFRRAIACQLSRVLNLPPENLITSISAVPISQKEEVADFQLSVDSLLEKDNDHSRPD Sbjct: 1 MACGFRRAIACQLSRVLNLPPENLITSISAVPISQKEEVADFQLSVDSLLEKDNDHSRPD 60 Query: 61 IQVQAKRLAEKLRCDTVVSEISTGQRTVNFKINRELLTKTVLQQVIEDGSKYGLKSELFS 120 IQVQAKRLAEKLRCDTVVSEISTGQRTVNFKINRELLTKTVLQQVIEDGSKYGLKSELFS Sbjct: 61 IQVQAKRLAEKLRCDTVVSEISTGQRTVNFKINRELLTKTVLQQVIEDGSKYGLKSELFS 120 Query: 121 GLPQKKIVVEFSSPNVAKKFHVGHLRSTIIGNFIANLKEALGHQVIRINYLGDWGMQFGL 180 GLPQKKIVVEFSSPNVAKKFHVGHLRSTIIGNFIANLKEALGHQVIRINYLGDWGMQFGL Sbjct: 121 GLPQKKIVVEFSSPNVAKKFHVGHLRSTIIGNFIANLKEALGHQVIRINYLGDWGMQFGL 180 Query: 181 LGTGFQLFGYEEKLQSNPLQHLFEVYVQVNKEAADDKSVAKAAQEFFQRLELGDVQALSL 240 LGTGFQLFGYEEKLQSNPLQHLFEVYVQVNKEAADDKSVAKAAQEFFQRLELGDVQALSL Sbjct: 181 LGTGFQLFGYEEKLQSNPLQHLFEVYVQVNKEAADDKSVAKAAQEFFQRLELGDVQALSL 240 Query: 241 WQKFRDLSIEEYIRVYKRLGVYFDEYSGESFYREKSQEVLKLLESKGLLLKTIKGTAVVD 300 WQKFRDLSIEEYIRVYKRLGVYFDEYSGESFYREKSQEVLKLLESKGLLLKTIKGTAVVD Sbjct: 241 WQKFRDLSIEEYIRVYKRLGVYFDEYSGESFYREKSQEVLKLLESKGLLLKTIKGTAVVD 300 Query: 301 LSGNGDPSSICTVMRSDGTSLYATRDLAAAIDRMDKYNFDTMIYVTDKGQKKHFQQVFQM 360 LSGNGDPSSICTVMRSDGTSLYATRDLAAAIDRMDKYNFDTMIYVTDKGQKKHFQQVFQM Sbjct: 301 LSGNGDPSSICTVMRSDGTSLYATRDLAAAIDRMDKYNFDTMIYVTDKGQKKHFQQVFQM 360 Query: 361 LKIMGYDWAERCQHVPFGVVQGMKTRRGDVTFLEDVLNEIQLRMLQNMASIKTTKELKNP 420 LKIMGYDWAERCQHVPFGVVQGMKTRRGDVTFLEDVLNEIQLRMLQNMASIKTTKELKNP Sbjct: 361 LKIMGYDWAERCQHVPFGVVQGMKTRRGDVTFLEDVLNEIQLRMLQNMASIKTTKELKNP 420 Query: 421 QETAERVGLAALIIQDFKGLLLSDYKFSWDRVFQSRGDTGVFLQYTHARLHSLEETFGCG 480 QETAERVGLAALIIQDFKGLLLSDYKFSWDRVFQSRGDTGVFLQYTHARLHSLEETFGCG Sbjct: 421 QETAERVGLAALIIQDFKGLLLSDYKFSWDRVFQSRGDTGVFLQYTHARLHSLEETFGCG 480 Query: 481 YLNDFNTACLQEPQSVSILQHLLRFDEVLYKSSQDFQPRHIVSYLLTLSHLAAVAHKTLQ 540 YLNDFNTACLQEPQSVSILQHLLRFDEVLYKSSQDFQPRHIVSYLLTLSHLAAVAHKTLQ Sbjct: 481 YLNDFNTACLQEPQSVSILQHLLRFDEVLYKSSQDFQPRHIVSYLLTLSHLAAVAHKTLQ 540 Query: 541 IKDSPPEVAGARLHLFKAVRSVLANGMKLLGITPVCRM 578 IKDSPPEVAGARLHLFKAVRSVLANGMKLLGITPVCRM Sbjct: 541 IKDSPPEVAGARLHLFKAVRSVLANGMKLLGITPVCRM 578 >gi|15149476 arginyl-tRNA synthetase [Homo sapiens] Length = 660 Score = 205 bits (521), Expect = 1e-52 Identities = 166/576 (28%), Positives = 275/576 (47%), Gaps = 51/576 (8%) Query: 34 SQKEEVADFQ----LSVDSLLEKDNDHSRPDIQVQAKRLAEKLRCDTVVSEIS-TGQRTV 88 SQ+ + D+Q + + +L+ P + A+ + + L + + ++ G + Sbjct: 105 SQQAKFGDYQCNSAMGISQMLKTKEQKVNP--REIAENITKHLPDNECIEKVEIAGPGFI 162 Query: 89 NFKINRELLTKTVLQQVIEDGSKYGLKSELFSGLPQKKIVVEFSSPNVAKKFHVGHLRST 148 N + ++ +++ L ++ +G + E KK++V+FSSPN+AK+ HVGHLRST Sbjct: 163 NVHLRKDFVSEQ-LTSLLVNGVQLPALGE------NKKVIVDFSSPNIAKEMHVGHLRST 215 Query: 149 IIGNFIANLKEALGHQVIRINYLGDWGMQFGLLGTGFQLFGYEEKLQSNPLQHLFEVYVQ 208 IIG I+ L E G+ V+R+N++GDWG QFG+L Q + S P+ L Y + Sbjct: 216 IIGESISRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKE 275 Query: 209 VNKEAADDKSVAKAAQEFFQRLELGDVQALSLWQKFRDLSIEEYIRVYKRLGVYFDEYSG 268 K ++ K A + L+ + W+ D+S +E ++Y L V E G Sbjct: 276 SKKRFDTEEEFKKRAYQCVVLLQGKNPDITKAWKLICDVSRQELNKIYDALDVSLIE-RG 334 Query: 269 ESFYREKSQEVLKLLESKGLLLKTIKGTAVVDLSGNGDPSSICTVMRSDGTSLYATRDLA 328 ESFY+++ +++K E +G ++ G +V + G P T+++SDG Y T DLA Sbjct: 335 ESFYQDRMNDIVKEFEDRG-FVQVDDGRKIVFVPGCSIP---LTIVKSDGGYTYDTSDLA 390 Query: 329 AAIDRMDKYNFDTMIYVTDKGQKKHFQQVFQMLKIMG-YD-WAERCQHVPFGVVQG---- 382 A R+ + D +IYV D GQ HFQ +F +++G YD R H FGVV G Sbjct: 391 AIKQRLFEEKADMIIYVVDNGQSVHFQTIFAAAQMIGWYDPKVTRVFHAGFGVVLGEDKK 450 Query: 383 -MKTRRGDVTFLEDVLNEIQLRMLQNMASIKTTKELKNPQETAERVGLAALIIQ--DFKG 439 KTR G+ L D+L E R + + + K L + A + +A I+ D Sbjct: 451 KFKTRSGETVRLMDLLGEGLKRSMDKLKEKERDKVLTAEELNAAQTSVAYGCIKYADLSH 510 Query: 440 LLLSDYKFSWDRVFQSRGDTGVFLQYTHARLHSLEETFGCGYLNDFNTACLQEP--QSVS 497 L+DY FS+D++ RG+T +L Y R+ S+ L + + LQ+ ++ Sbjct: 511 NRLNDYIFSFDKMLDDRGNTAAYLLYAFTRIRSIAR------LANIDEEMLQKAARETKI 564 Query: 498 ILQH---------LLRFDEVLYKSSQDFQPRHIVSYLLTLSHLAAVAHKTLQIKDSPPEV 548 +L H +LRF E+L K D + Y+ L+ + + + + Sbjct: 565 LLDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYELATAFTEFYDSCYCVEKDRQT 624 Query: 549 AGA------RLHLFKAVRSVLANGMKLLGITPVCRM 578 R+ L +AV +V+A G +LGI PV RM Sbjct: 625 GKILKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 660 >gi|38146111 DALR anticodon binding domain containing 3 isoform 2 [Homo sapiens] Length = 376 Score = 33.5 bits (75), Expect = 0.55 Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 25/142 (17%) Query: 459 TGVFLQYTHARLHSLEETFGCGY----------LNDFNTACLQ-EPQSVSILQHLLRFDE 507 +G F+ Y ARL +L E++ C ++ + + L E + + + +L F + Sbjct: 232 SGTFVMYNCARLATLFESYKCSMEQGLYPTFPPVSSLDFSLLHDEGEWLLLFNSILPFPD 291 Query: 508 VLYKSSQ----------DFQPRHIVSYLLTLSHLAAVAHKTLQIKDSP-PEVAG---ARL 553 +L +++ + I +L+ LS + + + I P P + G RL Sbjct: 292 LLSRTAVLDCTAPGLHIAVRTEMICKFLVQLSMDFSSYYNRVHILGEPRPHLFGQMFVRL 351 Query: 554 HLFKAVRSVLANGMKLLGITPV 575 L +AVR VL G+ +LG+ P+ Sbjct: 352 QLLRAVREVLHTGLAMLGLPPL 373 >gi|58331230 DALR anticodon binding domain containing 3 isoform 1 [Homo sapiens] Length = 543 Score = 33.5 bits (75), Expect = 0.55 Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 25/142 (17%) Query: 459 TGVFLQYTHARLHSLEETFGCGY----------LNDFNTACLQ-EPQSVSILQHLLRFDE 507 +G F+ Y ARL +L E++ C ++ + + L E + + + +L F + Sbjct: 399 SGTFVMYNCARLATLFESYKCSMEQGLYPTFPPVSSLDFSLLHDEGEWLLLFNSILPFPD 458 Query: 508 VLYKSSQ----------DFQPRHIVSYLLTLSHLAAVAHKTLQIKDSP-PEVAG---ARL 553 +L +++ + I +L+ LS + + + I P P + G RL Sbjct: 459 LLSRTAVLDCTAPGLHIAVRTEMICKFLVQLSMDFSSYYNRVHILGEPRPHLFGQMFVRL 518 Query: 554 HLFKAVRSVLANGMKLLGITPV 575 L +AVR VL G+ +LG+ P+ Sbjct: 519 QLLRAVREVLHTGLAMLGLPPL 540 >gi|118498343 ATPase, Ca++ transporting, type 2C, member 2 [Homo sapiens] Length = 946 Score = 32.0 bits (71), Expect = 1.6 Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 14/82 (17%) Query: 68 LAEKLRCDTVVSEISTGQRTVNFKINRELLTKTVLQQVIEDGSKYGLKSELFSG------ 121 + E L C +V+ TG T N TV Q V DG + + + G Sbjct: 366 IVETLGCCSVLCSDKTGTLTAN--------EMTVTQLVTSDGLRAEVSGVGYDGQGTVCL 417 Query: 122 LPQKKIVVEFSSPNVAKKFHVG 143 LP K+++ EFS+ +V K G Sbjct: 418 LPSKEVIKEFSNVSVGKLVEAG 439 >gi|24797151 dimethylglycine dehydrogenase precursor [Homo sapiens] Length = 866 Score = 30.8 bits (68), Expect = 3.6 Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 7/121 (5%) Query: 94 RELLTKTVLQQVIEDGSKY-GLKSELFSGLPQKKIVVEFSSPNVAKKFHVGHLRSTIIGN 152 R++L K + + +D K+ KS S +P I + ++ + +H S + + Sbjct: 638 RKVLQKLTSEDLSDDVFKFLQTKSLKVSNIPVTAIRISYTGELGWELYHRRE-DSVALYD 696 Query: 153 FIANLKEALGHQVIRINYLGDWGMQFGLLGTGFQLFGYEEKLQSNPLQHLFEVYVQVNKE 212 I N + G I+ G + M L F+ +G E +NPL+ E +V++NK Sbjct: 697 AIMNAGQEEG-----IDNFGTYAMNALRLEKAFRAWGLEMNCDTNPLEAGLEYFVKLNKP 751 Query: 213 A 213 A Sbjct: 752 A 752 >gi|7661872 leucyl-tRNA synthetase 2, mitochondrial precursor [Homo sapiens] Length = 903 Score = 30.4 bits (67), Expect = 4.6 Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 6/86 (6%) Query: 82 STGQRTVNFKIN-RELLTKTVLQQVIEDGSKYGLKSELFSGLPQKKIVVEFSSPNVAKKF 140 +TG+ T + + R+ + K Q++ E SK SE P+ ++ F P+ K Sbjct: 43 ATGKWTKEYTLQTRKDVEKWWHQRIKEQASKI---SEADKSKPKFYVLSMFPYPS--GKL 97 Query: 141 HVGHLRSTIIGNFIANLKEALGHQVI 166 H+GH+R I + IA ++ G QVI Sbjct: 98 HMGHVRVYTISDTIARFQKMRGMQVI 123 >gi|224451124 neurobeachin-like 1 isoform 3 [Homo sapiens] Length = 2694 Score = 30.4 bits (67), Expect = 4.6 Identities = 58/252 (23%), Positives = 102/252 (40%), Gaps = 45/252 (17%) Query: 264 DEYSGESFYREKSQEVLKLLESKGLLLKTIKGTAVVDLSGNGD------PSSICTVMRSD 317 D GE ++ ++QE L L + G ++S +G PS+ V + Sbjct: 1347 DSSVGELSFKSENQEEFWHSNPSHLSLD-LSGIDSCEMSDSGSQVPDSLPSTPSPVESTK 1405 Query: 318 GTSLYATRDLAAAIDRMDKYNFDTMIYVTDKGQKKHFQQVFQMLK-IMGY---------- 366 S+++ R+ + D +F + + Q++ +++ Q+L I+ Y Sbjct: 1406 SFSVHSDRESSITNDMGFSDDFSLL-----ESQERCEEELLQLLTHILNYVMCKGLEKSD 1460 Query: 367 --DWAERCQHVPFGVVQGMKTRRGDVTFLEDVLNEIQLRMLQNMA--SIKTTKELKNPQE 422 W ER G V ++ G + L +EI+L +LQ M +I +E K Sbjct: 1461 DDTWIER------GQVFSALSKPGISSELLRPSDEIKLTLLQKMLEWAISENREAKTNPV 1514 Query: 423 TAERVGLAALIIQDF---KGL---------LLSDYKFSWDRVFQSRGDTGVFLQYTHARL 470 TAE LIIQDF +GL LL D +D + ++ V+++ + ++ Sbjct: 1515 TAENAFRLVLIIQDFLQSEGLVNSNMWTEKLLEDMMLLFDCLSVCYSESPVWVKLSQIQI 1574 Query: 471 HSLEETFGCGYL 482 L G G L Sbjct: 1575 QLLLGFIGRGNL 1586 >gi|154240744 neurobeachin-like 1 isoform 2 [Homo sapiens] Length = 1335 Score = 30.4 bits (67), Expect = 4.6 Identities = 58/252 (23%), Positives = 102/252 (40%), Gaps = 45/252 (17%) Query: 264 DEYSGESFYREKSQEVLKLLESKGLLLKTIKGTAVVDLSGNGD------PSSICTVMRSD 317 D GE ++ ++QE L L + G ++S +G PS+ V + Sbjct: 57 DSSVGELSFKSENQEEFWHSNPSHLSLD-LSGIDSCEMSDSGSQVPDSLPSTPSPVESTK 115 Query: 318 GTSLYATRDLAAAIDRMDKYNFDTMIYVTDKGQKKHFQQVFQMLK-IMGY---------- 366 S+++ R+ + D +F + + Q++ +++ Q+L I+ Y Sbjct: 116 SFSVHSDRESSITNDMGFSDDFSLL-----ESQERCEEELLQLLTHILNYVMCKGLEKSD 170 Query: 367 --DWAERCQHVPFGVVQGMKTRRGDVTFLEDVLNEIQLRMLQNMA--SIKTTKELKNPQE 422 W ER G V ++ G + L +EI+L +LQ M +I +E K Sbjct: 171 DDTWIER------GQVFSALSKPGISSELLRPSDEIKLTLLQKMLEWAISENREAKTNPV 224 Query: 423 TAERVGLAALIIQDF---KGL---------LLSDYKFSWDRVFQSRGDTGVFLQYTHARL 470 TAE LIIQDF +GL LL D +D + ++ V+++ + ++ Sbjct: 225 TAENAFRLVLIIQDFLQSEGLVNSNMWTEKLLEDMMLLFDCLSVCYSESPVWVKLSQIQI 284 Query: 471 HSLEETFGCGYL 482 L G G L Sbjct: 285 QLLLGFIGRGNL 296 >gi|149944613 neurobeachin-like 1 isoform 1 [Homo sapiens] Length = 1404 Score = 30.4 bits (67), Expect = 4.6 Identities = 58/252 (23%), Positives = 102/252 (40%), Gaps = 45/252 (17%) Query: 264 DEYSGESFYREKSQEVLKLLESKGLLLKTIKGTAVVDLSGNGD------PSSICTVMRSD 317 D GE ++ ++QE L L + G ++S +G PS+ V + Sbjct: 57 DSSVGELSFKSENQEEFWHSNPSHLSLD-LSGIDSCEMSDSGSQVPDSLPSTPSPVESTK 115 Query: 318 GTSLYATRDLAAAIDRMDKYNFDTMIYVTDKGQKKHFQQVFQMLK-IMGY---------- 366 S+++ R+ + D +F + + Q++ +++ Q+L I+ Y Sbjct: 116 SFSVHSDRESSITNDMGFSDDFSLL-----ESQERCEEELLQLLTHILNYVMCKGLEKSD 170 Query: 367 --DWAERCQHVPFGVVQGMKTRRGDVTFLEDVLNEIQLRMLQNMA--SIKTTKELKNPQE 422 W ER G V ++ G + L +EI+L +LQ M +I +E K Sbjct: 171 DDTWIER------GQVFSALSKPGISSELLRPSDEIKLTLLQKMLEWAISENREAKTNPV 224 Query: 423 TAERVGLAALIIQDF---KGL---------LLSDYKFSWDRVFQSRGDTGVFLQYTHARL 470 TAE LIIQDF +GL LL D +D + ++ V+++ + ++ Sbjct: 225 TAENAFRLVLIIQDFLQSEGLVNSNMWTEKLLEDMMLLFDCLSVCYSESPVWVKLSQIQI 284 Query: 471 HSLEETFGCGYL 482 L G G L Sbjct: 285 QLLLGFIGRGNL 296 >gi|21361863 stonin 2 [Homo sapiens] Length = 905 Score = 30.4 bits (67), Expect = 4.6 Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 1/76 (1%) Query: 449 WDRVFQSRGDTGVFLQYTHARLHSLEETFGCGYLNDFNTACLQEPQSVSILQHLLRFDEV 508 W +F DTG Y L F ++ + LQ + H LR D V Sbjct: 446 WGPIFVKLTDTGYLQLYYEQGLEKPFREFKLEICHEISEPRLQNYDENGRI-HSLRIDRV 504 Query: 509 LYKSSQDFQPRHIVSY 524 YK + +QP+ V++ Sbjct: 505 TYKEKKKYQPKPAVAH 520 >gi|22749377 DnaJ (Hsp40) homolog, subfamily C, member 18 [Homo sapiens] Length = 358 Score = 30.0 bits (66), Expect = 6.1 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 465 YTHARLHSLEETFGCGYLNDFNTACLQEPQSVSILQHL--LRFDEVLYKSSQDFQ 517 Y A LH LE+T Y++ T+C +E Q S L +L L DE L + ++ + Sbjct: 287 YRGASLHDLEKTIEKDYIDYIQTSCWKEKQQKSELTNLAGLYRDERLKQKAESLK 341 >gi|149192841 zinc finger protein 527 [Homo sapiens] Length = 609 Score = 29.6 bits (65), Expect = 7.9 Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 9/75 (12%) Query: 76 TVVSEISTGQRTVNF-KINRELLTKTVL--QQ---VIEDGSKYGLKSELFSGLPQKKIVV 129 T V EISTG+R F R + K+V QQ I+ K+ + +LF PQ +++ Sbjct: 151 TAVKEISTGKRDNEFSNSGRSIPLKSVFLTQQKVPTIQQVHKFDIYDKLF---PQNSVII 207 Query: 130 EFSSPNVAKKFHVGH 144 E+ + K+ +G+ Sbjct: 208 EYKRLHAEKESLIGN 222 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.321 0.136 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 19,821,874 Number of Sequences: 37866 Number of extensions: 806851 Number of successful extensions: 1997 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 10 Number of HSP's that attempted gapping in prelim test: 1987 Number of HSP's gapped (non-prelim): 13 length of query: 578 length of database: 18,247,518 effective HSP length: 108 effective length of query: 470 effective length of database: 14,157,990 effective search space: 6654255300 effective search space used: 6654255300 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.