Guide to the Human Genome
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Search of human proteins with 195927020

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|195927020 calcium binding protein 39 [Homo sapiens]
         (341 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|195927022 calcium binding protein 39 [Homo sapiens]                673   0.0  
gi|195927020 calcium binding protein 39 [Homo sapiens]                673   0.0  
gi|7706481 calcium binding protein 39 [Homo sapiens]                  673   0.0  
gi|118766335 calcium binding protein 39-like [Homo sapiens]           535   e-152
gi|118766350 calcium binding protein 39-like [Homo sapiens]           535   e-152
gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens]    35   0.097
gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo s...    34   0.22 
gi|116256481 TNFAIP3 interacting protein 1 [Homo sapiens]              33   0.28 
gi|169207319 PREDICTED: hypothetical protein [Homo sapiens]            33   0.37 
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]     33   0.48 
gi|169207756 PREDICTED: hypothetical protein [Homo sapiens]            33   0.48 
gi|169207046 PREDICTED: hypothetical protein [Homo sapiens]            33   0.48 
gi|156104908 myosin heavy chain 6 [Homo sapiens]                       32   0.63 
gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo...    32   1.1  
gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo...    32   1.1  
gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [...    30   2.4  
gi|156938331 PRP39 pre-mRNA processing factor 39 homolog [Homo s...    30   2.4  
gi|38045919 huntingtin interacting protein 1 [Homo sapiens]            30   3.1  
gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [H...    30   4.1  
gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo...    29   5.3  
gi|11497047 ADAM metallopeptidase domain 22 isoform 1 preproprot...    29   5.3  
gi|21536386 ADAM metallopeptidase domain 22 isoform 2 preproprot...    29   5.3  
gi|11497043 ADAM metallopeptidase domain 22 isoform 5 preproprot...    29   5.3  
gi|21536383 ADAM metallopeptidase domain 22 isoform 3 preproprot...    29   5.3  
gi|4757722 ADAM metallopeptidase domain 22 isoform 4 preproprote...    29   5.3  
gi|239741905 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens]      29   6.9  
gi|236463300 hypothetical protein LOC79846 isoform 2 [Homo sapiens]    28   9.1  
gi|236463164 hypothetical protein LOC79846 isoform 1 [Homo sapiens]    28   9.1  
gi|157738629 kinesin family member 13A isoform d [Homo sapiens]        28   9.1  
gi|157738627 kinesin family member 13A isoform c [Homo sapiens]        28   9.1  

>gi|195927022 calcium binding protein 39 [Homo sapiens]
          Length = 341

 Score =  673 bits (1736), Expect = 0.0
 Identities = 341/341 (100%), Positives = 341/341 (100%)

Query: 1   MPFPFGKSHKSPADIVKNLKESMAVLEKQDISDKKAEKATEEVSKNLVAMKEILYGTNEK 60
           MPFPFGKSHKSPADIVKNLKESMAVLEKQDISDKKAEKATEEVSKNLVAMKEILYGTNEK
Sbjct: 1   MPFPFGKSHKSPADIVKNLKESMAVLEKQDISDKKAEKATEEVSKNLVAMKEILYGTNEK 60

Query: 61  EPQTEAVAQLAQELYNSGLLSTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYI 120
           EPQTEAVAQLAQELYNSGLLSTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYI
Sbjct: 61  EPQTEAVAQLAQELYNSGLLSTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYI 120

Query: 121 CTQQNILFMLLKGYESPEIALNCGIMLRECIRHEPLAKIILWSEQFYDFFRYVEMSTFDI 180
           CTQQNILFMLLKGYESPEIALNCGIMLRECIRHEPLAKIILWSEQFYDFFRYVEMSTFDI
Sbjct: 121 CTQQNILFMLLKGYESPEIALNCGIMLRECIRHEPLAKIILWSEQFYDFFRYVEMSTFDI 180

Query: 181 ASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELLLDR 240
           ASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELLLDR
Sbjct: 181 ASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELLLDR 240

Query: 241 HNFTIMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLKNQA 300
           HNFTIMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLKNQA
Sbjct: 241 HNFTIMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLKNQA 300

Query: 301 KLIEFLSKFQNDRTEDEQFNDEKTYLVKQIRDLKRPAQQEA 341
           KLIEFLSKFQNDRTEDEQFNDEKTYLVKQIRDLKRPAQQEA
Sbjct: 301 KLIEFLSKFQNDRTEDEQFNDEKTYLVKQIRDLKRPAQQEA 341


>gi|195927020 calcium binding protein 39 [Homo sapiens]
          Length = 341

 Score =  673 bits (1736), Expect = 0.0
 Identities = 341/341 (100%), Positives = 341/341 (100%)

Query: 1   MPFPFGKSHKSPADIVKNLKESMAVLEKQDISDKKAEKATEEVSKNLVAMKEILYGTNEK 60
           MPFPFGKSHKSPADIVKNLKESMAVLEKQDISDKKAEKATEEVSKNLVAMKEILYGTNEK
Sbjct: 1   MPFPFGKSHKSPADIVKNLKESMAVLEKQDISDKKAEKATEEVSKNLVAMKEILYGTNEK 60

Query: 61  EPQTEAVAQLAQELYNSGLLSTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYI 120
           EPQTEAVAQLAQELYNSGLLSTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYI
Sbjct: 61  EPQTEAVAQLAQELYNSGLLSTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYI 120

Query: 121 CTQQNILFMLLKGYESPEIALNCGIMLRECIRHEPLAKIILWSEQFYDFFRYVEMSTFDI 180
           CTQQNILFMLLKGYESPEIALNCGIMLRECIRHEPLAKIILWSEQFYDFFRYVEMSTFDI
Sbjct: 121 CTQQNILFMLLKGYESPEIALNCGIMLRECIRHEPLAKIILWSEQFYDFFRYVEMSTFDI 180

Query: 181 ASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELLLDR 240
           ASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELLLDR
Sbjct: 181 ASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELLLDR 240

Query: 241 HNFTIMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLKNQA 300
           HNFTIMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLKNQA
Sbjct: 241 HNFTIMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLKNQA 300

Query: 301 KLIEFLSKFQNDRTEDEQFNDEKTYLVKQIRDLKRPAQQEA 341
           KLIEFLSKFQNDRTEDEQFNDEKTYLVKQIRDLKRPAQQEA
Sbjct: 301 KLIEFLSKFQNDRTEDEQFNDEKTYLVKQIRDLKRPAQQEA 341


>gi|7706481 calcium binding protein 39 [Homo sapiens]
          Length = 341

 Score =  673 bits (1736), Expect = 0.0
 Identities = 341/341 (100%), Positives = 341/341 (100%)

Query: 1   MPFPFGKSHKSPADIVKNLKESMAVLEKQDISDKKAEKATEEVSKNLVAMKEILYGTNEK 60
           MPFPFGKSHKSPADIVKNLKESMAVLEKQDISDKKAEKATEEVSKNLVAMKEILYGTNEK
Sbjct: 1   MPFPFGKSHKSPADIVKNLKESMAVLEKQDISDKKAEKATEEVSKNLVAMKEILYGTNEK 60

Query: 61  EPQTEAVAQLAQELYNSGLLSTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYI 120
           EPQTEAVAQLAQELYNSGLLSTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYI
Sbjct: 61  EPQTEAVAQLAQELYNSGLLSTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYI 120

Query: 121 CTQQNILFMLLKGYESPEIALNCGIMLRECIRHEPLAKIILWSEQFYDFFRYVEMSTFDI 180
           CTQQNILFMLLKGYESPEIALNCGIMLRECIRHEPLAKIILWSEQFYDFFRYVEMSTFDI
Sbjct: 121 CTQQNILFMLLKGYESPEIALNCGIMLRECIRHEPLAKIILWSEQFYDFFRYVEMSTFDI 180

Query: 181 ASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELLLDR 240
           ASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELLLDR
Sbjct: 181 ASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELLLDR 240

Query: 241 HNFTIMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLKNQA 300
           HNFTIMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLKNQA
Sbjct: 241 HNFTIMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLKNQA 300

Query: 301 KLIEFLSKFQNDRTEDEQFNDEKTYLVKQIRDLKRPAQQEA 341
           KLIEFLSKFQNDRTEDEQFNDEKTYLVKQIRDLKRPAQQEA
Sbjct: 301 KLIEFLSKFQNDRTEDEQFNDEKTYLVKQIRDLKRPAQQEA 341


>gi|118766335 calcium binding protein 39-like [Homo sapiens]
          Length = 337

 Score =  535 bits (1377), Expect = e-152
 Identities = 271/333 (81%), Positives = 302/333 (90%), Gaps = 3/333 (0%)

Query: 5   FGKSHKSPADIVKNLKESMAVLEKQDISDKKAEKATEEVSKNLVAMKEILYGTNEKEPQT 64
           F KSHK+PA+IVK LK+++A+LEKQD   KK +KA+EEVSK+L AMKEIL GTNEKEP T
Sbjct: 7   FSKSHKNPAEIVKILKDNLAILEKQD---KKTDKASEEVSKSLQAMKEILCGTNEKEPPT 63

Query: 65  EAVAQLAQELYNSGLLSTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYICTQQ 124
           EAVAQLAQELY+SGLL TL+ADLQLIDFEGKKDV QIFNNILRRQIGTR+PTVEYI    
Sbjct: 64  EAVAQLAQELYSSGLLVTLIADLQLIDFEGKKDVTQIFNNILRRQIGTRSPTVEYISAHP 123

Query: 125 NILFMLLKGYESPEIALNCGIMLRECIRHEPLAKIILWSEQFYDFFRYVEMSTFDIASDA 184
           +ILFMLLKGYE+P+IAL CGIMLRECIRHEPLAKIIL+S QF DFF+YVE+STFDIASDA
Sbjct: 124 HILFMLLKGYEAPQIALRCGIMLRECIRHEPLAKIILFSNQFRDFFKYVELSTFDIASDA 183

Query: 185 FATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELLLDRHNFT 244
           FATFKDLLTRHK+L A+FLEQ+YD  F +YEKLL SENYVTKRQSLKLLGEL+LDRHNF 
Sbjct: 184 FATFKDLLTRHKVLVADFLEQNYDTIFEDYEKLLQSENYVTKRQSLKLLGELILDRHNFA 243

Query: 245 IMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLKNQAKLIE 304
           IMTKYISKPENLKLMMNLLRDKS NIQFEAFHVFKVFVA+P+KTQPI++ILLKNQ KLIE
Sbjct: 244 IMTKYISKPENLKLMMNLLRDKSPNIQFEAFHVFKVFVASPHKTQPIVEILLKNQPKLIE 303

Query: 305 FLSKFQNDRTEDEQFNDEKTYLVKQIRDLKRPA 337
           FLS FQ +RT+DEQF DEK YL+KQIRDLK+ A
Sbjct: 304 FLSSFQKERTDDEQFADEKNYLIKQIRDLKKTA 336


>gi|118766350 calcium binding protein 39-like [Homo sapiens]
          Length = 337

 Score =  535 bits (1377), Expect = e-152
 Identities = 271/333 (81%), Positives = 302/333 (90%), Gaps = 3/333 (0%)

Query: 5   FGKSHKSPADIVKNLKESMAVLEKQDISDKKAEKATEEVSKNLVAMKEILYGTNEKEPQT 64
           F KSHK+PA+IVK LK+++A+LEKQD   KK +KA+EEVSK+L AMKEIL GTNEKEP T
Sbjct: 7   FSKSHKNPAEIVKILKDNLAILEKQD---KKTDKASEEVSKSLQAMKEILCGTNEKEPPT 63

Query: 65  EAVAQLAQELYNSGLLSTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYICTQQ 124
           EAVAQLAQELY+SGLL TL+ADLQLIDFEGKKDV QIFNNILRRQIGTR+PTVEYI    
Sbjct: 64  EAVAQLAQELYSSGLLVTLIADLQLIDFEGKKDVTQIFNNILRRQIGTRSPTVEYISAHP 123

Query: 125 NILFMLLKGYESPEIALNCGIMLRECIRHEPLAKIILWSEQFYDFFRYVEMSTFDIASDA 184
           +ILFMLLKGYE+P+IAL CGIMLRECIRHEPLAKIIL+S QF DFF+YVE+STFDIASDA
Sbjct: 124 HILFMLLKGYEAPQIALRCGIMLRECIRHEPLAKIILFSNQFRDFFKYVELSTFDIASDA 183

Query: 185 FATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELLLDRHNFT 244
           FATFKDLLTRHK+L A+FLEQ+YD  F +YEKLL SENYVTKRQSLKLLGEL+LDRHNF 
Sbjct: 184 FATFKDLLTRHKVLVADFLEQNYDTIFEDYEKLLQSENYVTKRQSLKLLGELILDRHNFA 243

Query: 245 IMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLKNQAKLIE 304
           IMTKYISKPENLKLMMNLLRDKS NIQFEAFHVFKVFVA+P+KTQPI++ILLKNQ KLIE
Sbjct: 244 IMTKYISKPENLKLMMNLLRDKSPNIQFEAFHVFKVFVASPHKTQPIVEILLKNQPKLIE 303

Query: 305 FLSKFQNDRTEDEQFNDEKTYLVKQIRDLKRPA 337
           FLS FQ +RT+DEQF DEK YL+KQIRDLK+ A
Sbjct: 304 FLSSFQKERTDDEQFADEKNYLIKQIRDLKKTA 336


>gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens]
          Length = 1976

 Score = 35.0 bits (79), Expect = 0.097
 Identities = 38/163 (23%), Positives = 71/163 (43%), Gaps = 17/163 (10%)

Query: 188  FKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSL-KLLGELLLDRHNFTIM 246
            F  LL   K +SA + E+  DR  +E      +    TK  SL + L E L  +  F   
Sbjct: 1453 FDQLLAEEKSISARYAEER-DRAEAE------AREKETKALSLARALEEALEAKEEFERQ 1505

Query: 247  TKYI--------SKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLKN 298
             K +        S  +++   ++ L    R ++ +   +        ++ Q   D  L+ 
Sbjct: 1506 NKQLRADMEDLMSSKDDVGKNVHELEKSKRALEQQVEEMRTQLEELEDELQATEDAKLRL 1565

Query: 299  QAKLIEFLSKFQND-RTEDEQFNDEKTYLVKQIRDLKRPAQQE 340
            +  +    ++F+ D +T DEQ  ++K  L+KQ+R+L+   + E
Sbjct: 1566 EVNMQAMKAQFERDLQTRDEQNEEKKRLLIKQVRELEAELEDE 1608


>gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo
            sapiens]
          Length = 1935

 Score = 33.9 bits (76), Expect = 0.22
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 3/100 (3%)

Query: 17   KNLKESMAVLEKQDISDKKAEKATEEVSKNLVAMKEILYGTNEKEPQTEAVAQLAQELYN 76
            K   ES+  + K +   K+    TEE  KNL+ +++++     K    +  A+ A+E  N
Sbjct: 1831 KRNAESVKGMRKSERRIKELTYQTEEDRKNLLRLQDLVDKLQLKVKAYKRQAEEAEEQAN 1890

Query: 77   SGLLSTLVADLQLIDFEGKKDVAQIFNNILR---RQIGTR 113
            + L        +L + E + D+A+   N LR   R IGT+
Sbjct: 1891 TNLSKFRKVQHELDEAEERADIAESQVNKLRAKSRDIGTK 1930


>gi|116256481 TNFAIP3 interacting protein 1 [Homo sapiens]
          Length = 636

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 2/40 (5%)

Query: 295 LLKNQAKLIEFLSKFQNDRTEDEQFNDEKTYLVKQIRDLK 334
           LLK Q K+ E    FQ +R++ E+ N+EK  L KQ+  L+
Sbjct: 461 LLKQQVKIFE--EDFQRERSDRERMNEEKEELKKQVEKLQ 498


>gi|169207319 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 828

 Score = 33.1 bits (74), Expect = 0.37
 Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 23/131 (17%)

Query: 221 ENYVTKRQSLKLLGEL---------LLDRHNFTI---MTKYISKPENLKLMMNLLRDKSR 268
           + Y  KR+ L+ L  +         LL+ H F      ++YIS  E++K  +  LRD+  
Sbjct: 570 QEYKEKRRKLEELSNIITAQRQEEDLLNNHIFLFTRDFSRYISNMEDVKQELQQLRDQES 629

Query: 269 NIQFEAFHVFK----VFVANPNKTQPILDILLKNQAKLIEFLSKFQNDRTEDEQFNDEKT 324
               + F   K     F  N  K     D+LL    KL E++   +N+    E++ + + 
Sbjct: 630 KKNKDHFETLKNLENGFYINDQKA----DLLLLENKKLKEYILYLKNN---IEKYREGQE 682

Query: 325 YLVKQIRDLKR 335
            L+    DL R
Sbjct: 683 ALMHTSNDLSR 693


>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
          Length = 1960

 Score = 32.7 bits (73), Expect = 0.48
 Identities = 33/157 (21%), Positives = 73/157 (46%), Gaps = 5/157 (3%)

Query: 188  FKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTK--RQSLKLLGEL-LLDRHNFT 244
            F  LL   K +SA++ E+  DR  +E  +       + +   ++++   EL  L++   T
Sbjct: 1446 FDQLLAEEKTISAKYAEER-DRAEAEAREKETKALSLARALEEAMEQKAELERLNKQFRT 1504

Query: 245  IMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLKNQAKLIE 304
             M   +S  +++   ++ L    R ++ +   +        ++ Q   D  L+ +  L  
Sbjct: 1505 EMEDLMSSKDDVGKSVHELEKSKRALEQQVEEMKTQLEELEDELQATEDAKLRLEVNLQA 1564

Query: 305  FLSKFQND-RTEDEQFNDEKTYLVKQIRDLKRPAQQE 340
              ++F+ D +  DEQ  ++K  LV+Q+R+++   + E
Sbjct: 1565 MKAQFERDLQGRDEQSEEKKKQLVRQVREMEAELEDE 1601


>gi|169207756 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 828

 Score = 32.7 bits (73), Expect = 0.48
 Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 23/131 (17%)

Query: 221 ENYVTKRQSLKLLGEL---------LLDRHNFTI---MTKYISKPENLKLMMNLLRDKSR 268
           + Y  KR+ L+ L  +         LL+ H F      ++YIS  E++K  +  LRD+  
Sbjct: 570 QEYKEKRRKLEELSNIITAQRQEEDLLNNHIFLFTRDFSRYISNMEDVKQELQQLRDQES 629

Query: 269 NIQFEAFHVFK----VFVANPNKTQPILDILLKNQAKLIEFLSKFQNDRTEDEQFNDEKT 324
               + F   K     F  N  K     D+LL    KL E++   +N+    E++ + + 
Sbjct: 630 KKNKDHFETLKNLENGFYINDQKA----DLLLLENKKLKEYILYLKNN---IEKYREGQE 682

Query: 325 YLVKQIRDLKR 335
            L+    DL R
Sbjct: 683 ALMHTSSDLSR 693


>gi|169207046 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 828

 Score = 32.7 bits (73), Expect = 0.48
 Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 23/131 (17%)

Query: 221 ENYVTKRQSLKLLGEL---------LLDRHNFTI---MTKYISKPENLKLMMNLLRDKSR 268
           + Y  KR+ L+ L  +         LL+ H F      ++YIS  E++K  +  LRD+  
Sbjct: 570 QEYKEKRRKLEELSNIITAQRQEEDLLNNHIFLFTRDFSRYISNMEDVKQELQQLRDQES 629

Query: 269 NIQFEAFHVFK----VFVANPNKTQPILDILLKNQAKLIEFLSKFQNDRTEDEQFNDEKT 324
               + F   K     F  N  K     D+LL    KL E++   +N+    E++ + + 
Sbjct: 630 KKNKDHFETLKNLENGFYINDQKA----DLLLLENKKLKEYILYLKNN---IEKYREGQE 682

Query: 325 YLVKQIRDLKR 335
            L+    DL R
Sbjct: 683 ALMHTSSDLSR 693


>gi|156104908 myosin heavy chain 6 [Homo sapiens]
          Length = 1939

 Score = 32.3 bits (72), Expect = 0.63
 Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 3/100 (3%)

Query: 17   KNLKESMAVLEKQDISDKKAEKATEEVSKNLVAMKEILYGTNEKEPQTEAVAQLAQELYN 76
            K   ES+  + K +   K+    TEE  KNL+ +++++     K    +  A+ A+E  N
Sbjct: 1833 KRNAESVKGMRKSERRIKELTYQTEEDKKNLLRLQDLVDKLQLKVKAYKRQAEEAEEQAN 1892

Query: 77   SGLLSTLVADLQLIDFEGKKDVAQIFNNILR---RQIGTR 113
            + L        +L + E + D+A+   N LR   R IG +
Sbjct: 1893 TNLSKFRKVQHELDEAEERADIAESQVNKLRAKSRDIGAK 1932


>gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo
            sapiens]
          Length = 1941

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 26/105 (24%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 17   KNLKESMAVLEKQDISDKKAEKATEEVSKNLVAMKEILYGTNEKEPQTEAVAQLAQELYN 76
            K   E++  L K +   K+    TEE  KN++ +++++     K    +  A+ A+E  N
Sbjct: 1837 KRNAEAVKGLRKHERRVKELTYQTEEDRKNILRLQDLVDKLQAKVKSYKRQAEEAEEQSN 1896

Query: 77   SGLLSTLVADLQLIDFEGKKDVAQIFNNILR---RQIGTRTPTVE 118
            + L        +L + E + D+A+   N LR   R++ T+  + E
Sbjct: 1897 TNLAKFRKLQHELEEAEERADIAESQVNKLRVKSREVHTKVISEE 1941


>gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo
            sapiens]
          Length = 1941

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 26/105 (24%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 17   KNLKESMAVLEKQDISDKKAEKATEEVSKNLVAMKEILYGTNEKEPQTEAVAQLAQELYN 76
            K   E++  L K +   K+    TEE  KN++ +++++     K    +  A+ A+E  N
Sbjct: 1837 KRNAEAVKGLRKHERRVKELTYQTEEDRKNILRLQDLVDKLQAKVKSYKRQAEEAEEQSN 1896

Query: 77   SGLLSTLVADLQLIDFEGKKDVAQIFNNILR---RQIGTRTPTVE 118
            + L        +L + E + D+A+   N LR   R++ T+  + E
Sbjct: 1897 TNLAKFRKLQHELEEAEERADIAESQVNKLRVKSREVHTKVISEE 1941


>gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [Homo
            sapiens]
          Length = 1937

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 3/100 (3%)

Query: 17   KNLKESMAVLEKQDISDKKAEKATEEVSKNLVAMKEILYGTNEKEPQTEAVAQLAQELYN 76
            K   E++  L K +   K+    TEE  KN++ +++++     K    +  A+ A+E  N
Sbjct: 1834 KRNAEAVKGLRKHERRVKELTYQTEEDRKNVLRLQDLVDKLQAKVKSYKRQAEEAEEQSN 1893

Query: 77   SGLLSTLVADLQLIDFEGKKDVAQIFNNILR---RQIGTR 113
            + L        +L + E + D+A+   N LR   R++ T+
Sbjct: 1894 ANLSKFRKLQHELEEAEERADIAESQVNKLRVKSREVHTK 1933


>gi|156938331 PRP39 pre-mRNA processing factor 39 homolog [Homo
           sapiens]
          Length = 669

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 2/86 (2%)

Query: 254 ENLKLMMNLLR-DKSRNIQFEAFHVFKVFVANPNKTQPILDILLKNQAKLIEFLSKFQND 312
           EN KL +NLL  + S +++    ++   F    + + PI   +  +Q K +EFL  F +D
Sbjct: 525 ENTKLYLNLLEMEYSGDLKQNEENILNCFDKAVHGSLPIKMRITFSQRK-VEFLEDFGSD 583

Query: 313 RTEDEQFNDEKTYLVKQIRDLKRPAQ 338
             +     DE   L+K+   LKR A+
Sbjct: 584 VNKLLNAYDEHQTLLKEQDSLKRKAE 609


>gi|38045919 huntingtin interacting protein 1 [Homo sapiens]
          Length = 1037

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 17/66 (25%)

Query: 152 RHEPLAKIILWSEQFYDFFRYVEMSTFDIASDAFATFKDLLTRHKLLSAEFLEQHYDRFF 211
           R  PL ++IL     YD+                 T K L   H  L A+ L+ H DRF 
Sbjct: 221 RLAPLIQVILDCSHLYDY-----------------TVKLLFKLHSCLPADTLQGHRDRFM 263

Query: 212 SEYEKL 217
            ++ KL
Sbjct: 264 EQFTKL 269


>gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [Homo
            sapiens]
          Length = 1940

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 24/91 (26%), Positives = 43/91 (47%)

Query: 17   KNLKESMAVLEKQDISDKKAEKATEEVSKNLVAMKEILYGTNEKEPQTEAVAQLAQELYN 76
            K   ES+  L K +   K+    +EE  KN++ +++++     K    +  A+ A E  N
Sbjct: 1832 KKNTESVKGLRKYERRVKELTYQSEEDRKNVLRLQDLVDKLQVKVKSYKRQAEEADEQAN 1891

Query: 77   SGLLSTLVADLQLIDFEGKKDVAQIFNNILR 107
            + L     A  +L + E + D+A+   N LR
Sbjct: 1892 AHLTKFRKAQHELEEAEERADIAESQVNKLR 1922


>gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo
            sapiens]
          Length = 1939

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 3/96 (3%)

Query: 21   ESMAVLEKQDISDKKAEKATEEVSKNLVAMKEILYGTNEKEPQTEAVAQLAQELYNSGLL 80
            E++  L K +   K+    TEE  KN++ +++++     K    +  A+ A+E  N  L 
Sbjct: 1839 EAVKGLRKHERKVKELTYQTEEDRKNILRLQDLVDKLQAKVKSYKRQAEEAEEQSNVNLS 1898

Query: 81   STLVADLQLIDFEGKKDVAQIFNNILR---RQIGTR 113
                   +L + E + D+A+   N LR   R++ T+
Sbjct: 1899 KFRRIQHELEEAEERADIAESQVNKLRVKSREVHTK 1934


>gi|11497047 ADAM metallopeptidase domain 22 isoform 1 preproprotein
           [Homo sapiens]
          Length = 906

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 14/39 (35%), Positives = 26/39 (66%), Gaps = 4/39 (10%)

Query: 172 YVEMSTFDIASDAFAT--FKDLLTRHKLLSAEFLEQHYD 208
           +V+ ++F +  DAF T    D++  H LLS+E++E+H +
Sbjct: 85  HVDQASFQV--DAFGTSFILDVVLNHDLLSSEYIERHIE 121


>gi|21536386 ADAM metallopeptidase domain 22 isoform 2 preproprotein
           [Homo sapiens]
          Length = 899

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 14/39 (35%), Positives = 26/39 (66%), Gaps = 4/39 (10%)

Query: 172 YVEMSTFDIASDAFAT--FKDLLTRHKLLSAEFLEQHYD 208
           +V+ ++F +  DAF T    D++  H LLS+E++E+H +
Sbjct: 85  HVDQASFQV--DAFGTSFILDVVLNHDLLSSEYIERHIE 121


>gi|11497043 ADAM metallopeptidase domain 22 isoform 5 preproprotein
           [Homo sapiens]
          Length = 823

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 14/39 (35%), Positives = 26/39 (66%), Gaps = 4/39 (10%)

Query: 172 YVEMSTFDIASDAFAT--FKDLLTRHKLLSAEFLEQHYD 208
           +V+ ++F +  DAF T    D++  H LLS+E++E+H +
Sbjct: 85  HVDQASFQV--DAFGTSFILDVVLNHDLLSSEYIERHIE 121


>gi|21536383 ADAM metallopeptidase domain 22 isoform 3 preproprotein
           [Homo sapiens]
          Length = 870

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 14/39 (35%), Positives = 26/39 (66%), Gaps = 4/39 (10%)

Query: 172 YVEMSTFDIASDAFAT--FKDLLTRHKLLSAEFLEQHYD 208
           +V+ ++F +  DAF T    D++  H LLS+E++E+H +
Sbjct: 85  HVDQASFQV--DAFGTSFILDVVLNHDLLSSEYIERHIE 121


>gi|4757722 ADAM metallopeptidase domain 22 isoform 4 preproprotein
           [Homo sapiens]
          Length = 859

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 14/39 (35%), Positives = 26/39 (66%), Gaps = 4/39 (10%)

Query: 172 YVEMSTFDIASDAFAT--FKDLLTRHKLLSAEFLEQHYD 208
           +V+ ++F +  DAF T    D++  H LLS+E++E+H +
Sbjct: 85  HVDQASFQV--DAFGTSFILDVVLNHDLLSSEYIERHIE 121


>gi|239741905 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens]
          Length = 1710

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 31/145 (21%), Positives = 68/145 (46%), Gaps = 28/145 (19%)

Query: 22  SMAVLEKQDISDKKAEKATEEVSKNLVAMKEILYGTNEKEPQTEAVAQLAQELYNSGLLS 81
           ++ +++K+ +  +  E+ TE +++  VA  E      E   + + +  L  EL++SG   
Sbjct: 14  NICLIQKKTLRKELEEEMTEAITEAAVASSE------EVSEERDDLGPL--ELHDSGTFQ 65

Query: 82  TLVADLQLIDFEGKK--------DVAQIFNNILRRQIGTRTPTVEYICTQQNILFMLLKG 133
            +V  L +ID E  K        D+ +   +++  +  T  P+V        ++  L++ 
Sbjct: 66  QVVNLLDIIDSESAKTDTTGAGLDMRKTLASVIIMEKATTEPSV--------VINTLIRC 117

Query: 134 YESPEIA----LNCGIMLRECIRHE 154
            + PEI+    +N   +L++ I+ E
Sbjct: 118 LQVPEISTQRKVNIYNILQDIIQQE 142


>gi|236463300 hypothetical protein LOC79846 isoform 2 [Homo sapiens]
          Length = 923

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 4/75 (5%)

Query: 185 FATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELLLDRHNFT 244
           FATF ++ +++ L+    L   Y+ F  E +KLL +   +  +    +  +LL+D     
Sbjct: 321 FATFNEVKSQNLLVKGLKLSNSYEDF--ELKKLLFNVIVILCKDLPTV--QLLIDGKVIL 376

Query: 245 IMTKYISKPENLKLM 259
            +  Y+ KPE  K++
Sbjct: 377 ALFTYVKKPEKQKII 391


>gi|236463164 hypothetical protein LOC79846 isoform 1 [Homo sapiens]
          Length = 941

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 4/75 (5%)

Query: 185 FATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELLLDRHNFT 244
           FATF ++ +++ L+    L   Y+ F  E +KLL +   +  +    +  +LL+D     
Sbjct: 339 FATFNEVKSQNLLVKGLKLSNSYEDF--ELKKLLFNVIVILCKDLPTV--QLLIDGKVIL 394

Query: 245 IMTKYISKPENLKLM 259
            +  Y+ KPE  K++
Sbjct: 395 ALFTYVKKPEKQKII 409


>gi|157738629 kinesin family member 13A isoform d [Homo sapiens]
          Length = 1749

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 8/84 (9%)

Query: 13  ADIVKNLKESMAVLEKQDISDKKAEKATE-----EVSKNLVAMKEILYGTNEKEPQTEAV 67
           A +++ L+E +  L +Q +S  +A KA E     E S+ L+  KE+     EK  +TE +
Sbjct: 364 AKVIRELREEVEKLREQ-LSQAEAMKAPELKEKLEESEKLI--KELTVTWEEKLRKTEEI 420

Query: 68  AQLAQELYNSGLLSTLVADLQLID 91
           AQ  Q    S  +S  ++ +++ D
Sbjct: 421 AQERQRQLESMGISLEMSGIKVGD 444


>gi|157738627 kinesin family member 13A isoform c [Homo sapiens]
          Length = 1757

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 8/84 (9%)

Query: 13  ADIVKNLKESMAVLEKQDISDKKAEKATE-----EVSKNLVAMKEILYGTNEKEPQTEAV 67
           A +++ L+E +  L +Q +S  +A KA E     E S+ L+  KE+     EK  +TE +
Sbjct: 364 AKVIRELREEVEKLREQ-LSQAEAMKAPELKEKLEESEKLI--KELTVTWEEKLRKTEEI 420

Query: 68  AQLAQELYNSGLLSTLVADLQLID 91
           AQ  Q    S  +S  ++ +++ D
Sbjct: 421 AQERQRQLESMGISLEMSGIKVGD 444


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.135    0.377 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,385,427
Number of Sequences: 37866
Number of extensions: 453619
Number of successful extensions: 1683
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1640
Number of HSP's gapped (non-prelim): 51
length of query: 341
length of database: 18,247,518
effective HSP length: 103
effective length of query: 238
effective length of database: 14,347,320
effective search space: 3414662160
effective search space used: 3414662160
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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