Search of human proteins with 113412878

Search of human proteins with 113412878

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|113412878 PREDICTED: similar to voltage-dependent anion
channel 2 [Homo sapiens]
         (293 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|113412878 PREDICTED: similar to voltage-dependent anion chann...   604   e-173
gi|169164151 PREDICTED: similar to voltage-dependent anion chann...   602   e-172
gi|169163967 PREDICTED: similar to voltage-dependent anion chann...   600   e-172
gi|42476281 voltage-dependent anion channel 2 [Homo sapiens]          600   e-172
gi|4507879 voltage-dependent anion channel 1 [Homo sapiens]           454   e-128
gi|25188179 voltage-dependent anion channel 3 isoform b [Homo sa...   441   e-124
gi|208879465 voltage-dependent anion channel 3 isoform a [Homo s...   437   e-123
gi|4502841 carbohydrate (keratan sulfate Gal-6) sulfotransferase...    30   2.5  
gi|239747141 PREDICTED: hypothetical protein XP_002343923 [Homo ...    30   3.3  
gi|7662088 Rho guanine nucleotide exchange factor (GEF) 12 [Homo...    29   4.3  
gi|190014599 zinc finger protein 717 [Homo sapiens]                    29   5.6  

>gi|113412878 PREDICTED: similar to voltage-dependent anion channel
           2 [Homo sapiens]
          Length = 293

 Score =  604 bits (1558), Expect = e-173
 Identities = 293/293 (100%), Positives = 293/293 (100%)

Query: 1   MATHGQTCARPMCIPPSYADLGKAARDIFNKGFGFGLVKLDVKTKSCSGVEFSTSGSSNT 60
           MATHGQTCARPMCIPPSYADLGKAARDIFNKGFGFGLVKLDVKTKSCSGVEFSTSGSSNT
Sbjct: 1   MATHGQTCARPMCIPPSYADLGKAARDIFNKGFGFGLVKLDVKTKSCSGVEFSTSGSSNT 60

Query: 61  DTGKVTGTLETKYKWCEYGLTFTEKWNTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGK 120
           DTGKVTGTLETKYKWCEYGLTFTEKWNTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGK
Sbjct: 61  DTGKVTGTLETKYKWCEYGLTFTEKWNTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGK 120

Query: 121 KSGKIKSYKRECINLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNFA 180
           KSGKIKSYKRECINLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNFA
Sbjct: 121 KSGKIKSYKRECINLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNFA 180

Query: 181 VGYRTGDFQLHTNVNDGTEFGGSIYQKVCEDLDTSVNLAWTSGTNCTRFGIAAKYQLDPT 240
           VGYRTGDFQLHTNVNDGTEFGGSIYQKVCEDLDTSVNLAWTSGTNCTRFGIAAKYQLDPT
Sbjct: 181 VGYRTGDFQLHTNVNDGTEFGGSIYQKVCEDLDTSVNLAWTSGTNCTRFGIAAKYQLDPT 240

Query: 241 ASISAKVNNSSLIGVGYTQTLRPGVKLTLSALVDGKSINAGGHKVGLALELEA 293
           ASISAKVNNSSLIGVGYTQTLRPGVKLTLSALVDGKSINAGGHKVGLALELEA
Sbjct: 241 ASISAKVNNSSLIGVGYTQTLRPGVKLTLSALVDGKSINAGGHKVGLALELEA 293


>gi|169164151 PREDICTED: similar to voltage-dependent anion channel
           2 [Homo sapiens]
          Length = 293

 Score =  602 bits (1552), Expect = e-172
 Identities = 292/293 (99%), Positives = 292/293 (99%)

Query: 1   MATHGQTCARPMCIPPSYADLGKAARDIFNKGFGFGLVKLDVKTKSCSGVEFSTSGSSNT 60
           MATHGQTCARPMCIPPSYADLGKAARDIFNKGFGFGLVKLDVKTKSCSGVEFSTSGSSNT
Sbjct: 1   MATHGQTCARPMCIPPSYADLGKAARDIFNKGFGFGLVKLDVKTKSCSGVEFSTSGSSNT 60

Query: 61  DTGKVTGTLETKYKWCEYGLTFTEKWNTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGK 120
           DTGKVTGTLETKYKWCEYGLT TEKWNTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGK
Sbjct: 61  DTGKVTGTLETKYKWCEYGLTITEKWNTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGK 120

Query: 121 KSGKIKSYKRECINLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNFA 180
           KSGKIKSYKRECINLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNFA
Sbjct: 121 KSGKIKSYKRECINLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNFA 180

Query: 181 VGYRTGDFQLHTNVNDGTEFGGSIYQKVCEDLDTSVNLAWTSGTNCTRFGIAAKYQLDPT 240
           VGYRTGDFQLHTNVNDGTEFGGSIYQKVCEDLDTSVNLAWTSGTNCTRFGIAAKYQLDPT
Sbjct: 181 VGYRTGDFQLHTNVNDGTEFGGSIYQKVCEDLDTSVNLAWTSGTNCTRFGIAAKYQLDPT 240

Query: 241 ASISAKVNNSSLIGVGYTQTLRPGVKLTLSALVDGKSINAGGHKVGLALELEA 293
           ASISAKVNNSSLIGVGYTQTLRPGVKLTLSALVDGKSINAGGHKVGLALELEA
Sbjct: 241 ASISAKVNNSSLIGVGYTQTLRPGVKLTLSALVDGKSINAGGHKVGLALELEA 293


>gi|169163967 PREDICTED: similar to voltage-dependent anion channel
           2 [Homo sapiens]
          Length = 293

 Score =  600 bits (1546), Expect = e-172
 Identities = 291/293 (99%), Positives = 291/293 (99%)

Query: 1   MATHGQTCARPMCIPPSYADLGKAARDIFNKGFGFGLVKLDVKTKSCSGVEFSTSGSSNT 60
           MATHGQTCARPMCIPPSYADLGKAARDIFNKGFGFGLVKLDVKTKSCSGVEFSTSGSSNT
Sbjct: 1   MATHGQTCARPMCIPPSYADLGKAARDIFNKGFGFGLVKLDVKTKSCSGVEFSTSGSSNT 60

Query: 61  DTGKVTGTLETKYKWCEYGLTFTEKWNTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGK 120
           DTGKVTGTLETKYKWCEYGLT TEKWNTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGK
Sbjct: 61  DTGKVTGTLETKYKWCEYGLTITEKWNTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGK 120

Query: 121 KSGKIKSYKRECINLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNFA 180
           KSGKIKSYKRECINLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNFA
Sbjct: 121 KSGKIKSYKRECINLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNFA 180

Query: 181 VGYRTGDFQLHTNVNDGTEFGGSIYQKVCEDLDTSVNLAWTSGTNCTRFGIAAKYQLDPT 240
           VGYRTGDFQLHTNVNDGTEFGGSIYQKVCEDLDTSVNLAWTSGTNCTRFGIAAKYQ DPT
Sbjct: 181 VGYRTGDFQLHTNVNDGTEFGGSIYQKVCEDLDTSVNLAWTSGTNCTRFGIAAKYQSDPT 240

Query: 241 ASISAKVNNSSLIGVGYTQTLRPGVKLTLSALVDGKSINAGGHKVGLALELEA 293
           ASISAKVNNSSLIGVGYTQTLRPGVKLTLSALVDGKSINAGGHKVGLALELEA
Sbjct: 241 ASISAKVNNSSLIGVGYTQTLRPGVKLTLSALVDGKSINAGGHKVGLALELEA 293


>gi|42476281 voltage-dependent anion channel 2 [Homo sapiens]
          Length = 294

 Score =  600 bits (1546), Expect = e-172
 Identities = 293/294 (99%), Positives = 293/294 (99%), Gaps = 1/294 (0%)

Query: 1   MATHGQTCARPMCIPPSYADLGKAARDIFNKGFGFGLVKLDVKTKSCSGVEFSTSGSSNT 60
           MATHGQTCARPMCIPPSYADLGKAARDIFNKGFGFGLVKLDVKTKSCSGVEFSTSGSSNT
Sbjct: 1   MATHGQTCARPMCIPPSYADLGKAARDIFNKGFGFGLVKLDVKTKSCSGVEFSTSGSSNT 60

Query: 61  DTGKVTGTLETKYKWCEYGLTFTEKWNTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGK 120
           DTGKVTGTLETKYKWCEYGLTFTEKWNTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGK
Sbjct: 61  DTGKVTGTLETKYKWCEYGLTFTEKWNTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGK 120

Query: 121 KSGKIKS-YKRECINLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNF 179
           KSGKIKS YKRECINLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNF
Sbjct: 121 KSGKIKSSYKRECINLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNF 180

Query: 180 AVGYRTGDFQLHTNVNDGTEFGGSIYQKVCEDLDTSVNLAWTSGTNCTRFGIAAKYQLDP 239
           AVGYRTGDFQLHTNVNDGTEFGGSIYQKVCEDLDTSVNLAWTSGTNCTRFGIAAKYQLDP
Sbjct: 181 AVGYRTGDFQLHTNVNDGTEFGGSIYQKVCEDLDTSVNLAWTSGTNCTRFGIAAKYQLDP 240

Query: 240 TASISAKVNNSSLIGVGYTQTLRPGVKLTLSALVDGKSINAGGHKVGLALELEA 293
           TASISAKVNNSSLIGVGYTQTLRPGVKLTLSALVDGKSINAGGHKVGLALELEA
Sbjct: 241 TASISAKVNNSSLIGVGYTQTLRPGVKLTLSALVDGKSINAGGHKVGLALELEA 294


>gi|4507879 voltage-dependent anion channel 1 [Homo sapiens]
          Length = 283

 Score =  454 bits (1168), Expect = e-128
 Identities = 211/283 (74%), Positives = 258/283 (91%), Gaps = 1/283 (0%)

Query: 12  MCIPPSYADLGKAARDIFNKGFGFGLVKLDVKTKSCSGVEFSTSGSSNTDTGKVTGTLET 71
           M +PP+YADLGK+ARD+F KG+GFGL+KLD+KTKS +G+EF++SGS+NT+T KVTG+LET
Sbjct: 1   MAVPPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVTGSLET 60

Query: 72  KYKWCEYGLTFTEKWNTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGKKSGKIKS-YKR 130
           KY+W EYGLTFTEKWNTDNTLGTEI +EDQ+ +GLKLTFD++FSPNTGKK+ KIK+ YKR
Sbjct: 61  KYRWTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFDSSFSPNTGKKNAKIKTGYKR 120

Query: 131 ECINLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNFAVGYRTGDFQL 190
           E INLGCD+DFD AGP+I G+ V GYEGWLAGYQM F++AKS++T++NFAVGY+T +FQL
Sbjct: 121 EHINLGCDMDFDIAGPSIRGALVLGYEGWLAGYQMNFETAKSRVTQSNFAVGYKTDEFQL 180

Query: 191 HTNVNDGTEFGGSIYQKVCEDLDTSVNLAWTSGTNCTRFGIAAKYQLDPTASISAKVNNS 250
           HTNVNDGTEFGGSIYQKV + L+T+VNLAWT+G + TRFGIAAKYQ+DP A  SAKVNNS
Sbjct: 181 HTNVNDGTEFGGSIYQKVNKKLETAVNLAWTAGNSNTRFGIAAKYQIDPDACFSAKVNNS 240

Query: 251 SLIGVGYTQTLRPGVKLTLSALVDGKSINAGGHKVGLALELEA 293
           SLIG+GYTQTL+PG+KLTLSAL+DGK++NAGGHK+GL LE +A
Sbjct: 241 SLIGLGYTQTLKPGIKLTLSALLDGKNVNAGGHKLGLGLEFQA 283


>gi|25188179 voltage-dependent anion channel 3 isoform b [Homo
           sapiens]
          Length = 283

 Score =  441 bits (1135), Expect = e-124
 Identities = 208/283 (73%), Positives = 249/283 (87%), Gaps = 1/283 (0%)

Query: 12  MCIPPSYADLGKAARDIFNKGFGFGLVKLDVKTKSCSGVEFSTSGSSNTDTGKVTGTLET 71
           MC  P+Y DLGKAA+D+FNKG+GFG+VK+D+KTKSCSGVEFSTSG + TDTGK +G LET
Sbjct: 1   MCNTPTYCDLGKAAKDVFNKGYGFGMVKIDLKTKSCSGVEFSTSGHAYTDTGKASGNLET 60

Query: 72  KYKWCEYGLTFTEKWNTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGKKSGKIK-SYKR 130
           KYK C YGLTFT+KWNTDNTLGTEI+ E+++ +GLKLT DT F PNTGKKSGK+K SYKR
Sbjct: 61  KYKVCNYGLTFTQKWNTDNTLGTEISWENKLAEGLKLTLDTIFVPNTGKKSGKLKASYKR 120

Query: 131 ECINLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNFAVGYRTGDFQL 190
           +C ++G +VD DF+GP I+G AV  +EGWLAGYQM+FD+AKSKL++NNFA+GY+  DFQL
Sbjct: 121 DCFSVGSNVDIDFSGPTIYGWAVLAFEGWLAGYQMSFDTAKSKLSQNNFALGYKAADFQL 180

Query: 191 HTNVNDGTEFGGSIYQKVCEDLDTSVNLAWTSGTNCTRFGIAAKYQLDPTASISAKVNNS 250
           HT+VNDGTEFGGSIYQKV E ++TS+NLAWT+G+N TRFGIAAKY LD   S+SAKVNN+
Sbjct: 181 HTHVNDGTEFGGSIYQKVNEKIETSINLAWTAGSNNTRFGIAAKYMLDCRTSLSAKVNNA 240

Query: 251 SLIGVGYTQTLRPGVKLTLSALVDGKSINAGGHKVGLALELEA 293
           SLIG+GYTQTLRPGVKLTLSAL+DGK+ +AGGHKVGL  ELEA
Sbjct: 241 SLIGLGYTQTLRPGVKLTLSALIDGKNFSAGGHKVGLGFELEA 283


>gi|208879465 voltage-dependent anion channel 3 isoform a [Homo
           sapiens]
          Length = 284

 Score =  437 bits (1123), Expect = e-123
 Identities = 208/284 (73%), Positives = 249/284 (87%), Gaps = 2/284 (0%)

Query: 12  MCIPPSYADLGKAARDIFNKGFGFGLVKLDVKTKSCSGV-EFSTSGSSNTDTGKVTGTLE 70
           MC  P+Y DLGKAA+D+FNKG+GFG+VK+D+KTKSCSGV EFSTSG + TDTGK +G LE
Sbjct: 1   MCNTPTYCDLGKAAKDVFNKGYGFGMVKIDLKTKSCSGVMEFSTSGHAYTDTGKASGNLE 60

Query: 71  TKYKWCEYGLTFTEKWNTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGKKSGKIK-SYK 129
           TKYK C YGLTFT+KWNTDNTLGTEI+ E+++ +GLKLT DT F PNTGKKSGK+K SYK
Sbjct: 61  TKYKVCNYGLTFTQKWNTDNTLGTEISWENKLAEGLKLTLDTIFVPNTGKKSGKLKASYK 120

Query: 130 RECINLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNFAVGYRTGDFQ 189
           R+C ++G +VD DF+GP I+G AV  +EGWLAGYQM+FD+AKSKL++NNFA+GY+  DFQ
Sbjct: 121 RDCFSVGSNVDIDFSGPTIYGWAVLAFEGWLAGYQMSFDTAKSKLSQNNFALGYKAADFQ 180

Query: 190 LHTNVNDGTEFGGSIYQKVCEDLDTSVNLAWTSGTNCTRFGIAAKYQLDPTASISAKVNN 249
           LHT+VNDGTEFGGSIYQKV E ++TS+NLAWT+G+N TRFGIAAKY LD   S+SAKVNN
Sbjct: 181 LHTHVNDGTEFGGSIYQKVNEKIETSINLAWTAGSNNTRFGIAAKYMLDCRTSLSAKVNN 240

Query: 250 SSLIGVGYTQTLRPGVKLTLSALVDGKSINAGGHKVGLALELEA 293
           +SLIG+GYTQTLRPGVKLTLSAL+DGK+ +AGGHKVGL  ELEA
Sbjct: 241 ASLIGLGYTQTLRPGVKLTLSALIDGKNFSAGGHKVGLGFELEA 284


>gi|4502841 carbohydrate (keratan sulfate Gal-6) sulfotransferase 1
           [Homo sapiens]
          Length = 411

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 3/40 (7%)

Query: 8   CARPMCIPPSYADLGKAARDIFNKGFGFGLVKLDVKTKSC 47
           C+RP+C PP  ADL     D   K    GL+ L V  ++C
Sbjct: 161 CSRPVCDPPGPADLVLEEGDCVRK---CGLLNLTVAAEAC 197


>gi|239747141 PREDICTED: hypothetical protein XP_002343923 [Homo
           sapiens]
          Length = 904

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 18/61 (29%), Positives = 25/61 (40%)

Query: 43  KTKSCSGVEFSTSGSSNTDTGKVTGTLETKYKWCEYGLTFTEKWNTDNTLGTEIAIEDQI 102
           K   C+  E +     N    K+T T E  Y+  E G TF +K N     GT    +  +
Sbjct: 582 KPYECNECEKTFINKLNLGIHKITHTGERPYECNECGKTFRQKSNLSTHQGTHTGEKPYV 641

Query: 103 C 103
           C
Sbjct: 642 C 642


>gi|7662088 Rho guanine nucleotide exchange factor (GEF) 12 [Homo
           sapiens]
          Length = 1544

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 1/63 (1%)

Query: 2   ATHGQTCARPMCIPPSYADLGKAARD-IFNKGFGFGLVKLDVKTKSCSGVEFSTSGSSNT 60
           A H +  + P  + P   D  K  +  + N+G   G +  +  +   SG  FS  G    
Sbjct: 624 ARHPKHLSTPSSVSPEPQDSAKLRQSGLANEGTDAGYLPANSMSSVASGASFSQEGGKEN 683

Query: 61  DTG 63
           DTG
Sbjct: 684 DTG 686


>gi|190014599 zinc finger protein 717 [Homo sapiens]
          Length = 914

 Score = 28.9 bits (63), Expect = 5.6
 Identities = 20/68 (29%), Positives = 26/68 (38%)

Query: 43  KTKSCSGVEFSTSGSSNTDTGKVTGTLETKYKWCEYGLTFTEKWNTDNTLGTEIAIEDQI 102
           K   C+  E +     N    K T T E  Y+  E G TF +K N     GT    +  +
Sbjct: 589 KPYECNECEKTFINKLNLGIHKRTHTGERPYECNECGKTFRQKSNLSTHQGTHTGEKPYV 648

Query: 103 CQGLKLTF 110
           C     TF
Sbjct: 649 CNECGKTF 656


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.133    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,033,147
Number of Sequences: 37866
Number of extensions: 446695
Number of successful extensions: 851
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 828
Number of HSP's gapped (non-prelim): 11
length of query: 293
length of database: 18,247,518
effective HSP length: 101
effective length of query: 192
effective length of database: 14,423,052
effective search space: 2769225984
effective search space used: 2769225984
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.