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Search of human proteins with 194248084
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|194248084 sulfatase modifying factor 2 isoform d precursor
[Homo sapiens]
(236 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|194248084 sulfatase modifying factor 2 isoform d precursor [H... 488 e-138
gi|194248087 sulfatase modifying factor 2 isoform c precursor [H... 270 1e-72
gi|194248090 sulfatase modifying factor 2 isoform e precursor [H... 269 1e-72
gi|194248088 sulfatase modifying factor 2 isoform b precursor [H... 269 1e-72
gi|226437577 sulfatase modifying factor 2 isoform g [Homo sapiens] 224 5e-59
gi|38202250 sulfatase modifying factor 1 [Homo sapiens] 87 2e-17
gi|4758062 cytokine receptor-like factor 1 [Homo sapiens] 30 2.4
gi|4507399 transcription factor 4 isoform b [Homo sapiens] 28 6.9
gi|145312267 transcription factor 4 isoform a [Homo sapiens] 28 6.9
gi|157412255 praja 2, RING-H2 motif containing [Homo sapiens] 28 9.0
>gi|194248084 sulfatase modifying factor 2 isoform d precursor [Homo
sapiens]
Length = 236
Score = 488 bits (1256), Expect = e-138
Identities = 236/236 (100%), Positives = 236/236 (100%)
Query: 1 MRAHAQRGRGCTRRSAAVLMARHGLPLLPLLSLLVGAWLKLGNGQATSMVQLQGGRFLMG 60
MRAHAQRGRGCTRRSAAVLMARHGLPLLPLLSLLVGAWLKLGNGQATSMVQLQGGRFLMG
Sbjct: 1 MRAHAQRGRGCTRRSAAVLMARHGLPLLPLLSLLVGAWLKLGNGQATSMVQLQGGRFLMG 60
Query: 61 TNSPDSRDGEGPVREATVKPFAIDIFPVTNKDFRDFVREKKYRTEAEMFGWSFVFEDFVS 120
TNSPDSRDGEGPVREATVKPFAIDIFPVTNKDFRDFVREKKYRTEAEMFGWSFVFEDFVS
Sbjct: 61 TNSPDSRDGEGPVREATVKPFAIDIFPVTNKDFRDFVREKKYRTEAEMFGWSFVFEDFVS 120
Query: 121 DELRNKATQPMKGKFPKGDKAEDGFHGVSPVNAFPAQNNYGLYDLLGNVWEWTASPYQAA 180
DELRNKATQPMKGKFPKGDKAEDGFHGVSPVNAFPAQNNYGLYDLLGNVWEWTASPYQAA
Sbjct: 121 DELRNKATQPMKGKFPKGDKAEDGFHGVSPVNAFPAQNNYGLYDLLGNVWEWTASPYQAA 180
Query: 181 EQDMRVLRGASWIDTADGSANHRARVTTRMGNTPDSASDNLGFRCAADAGRPPGEL 236
EQDMRVLRGASWIDTADGSANHRARVTTRMGNTPDSASDNLGFRCAADAGRPPGEL
Sbjct: 181 EQDMRVLRGASWIDTADGSANHRARVTTRMGNTPDSASDNLGFRCAADAGRPPGEL 236
>gi|194248087 sulfatase modifying factor 2 isoform c precursor [Homo
sapiens]
Length = 305
Score = 270 bits (689), Expect = 1e-72
Identities = 133/136 (97%), Positives = 133/136 (97%)
Query: 1 MRAHAQRGRGCTRRSAAVLMARHGLPLLPLLSLLVGAWLKLGNGQATSMVQLQGGRFLMG 60
MRAHAQRGRGCTRRSAAVLMARHGLPLLPLLSLLVGAWLKLGNGQATSMVQLQGGRFLMG
Sbjct: 1 MRAHAQRGRGCTRRSAAVLMARHGLPLLPLLSLLVGAWLKLGNGQATSMVQLQGGRFLMG 60
Query: 61 TNSPDSRDGEGPVREATVKPFAIDIFPVTNKDFRDFVREKKYRTEAEMFGWSFVFEDFVS 120
TNSPDSRDGEGPVREATVKPFAIDIFPVTNKDFRDFVREKKYRTEAEMFGWSFVFEDFVS
Sbjct: 61 TNSPDSRDGEGPVREATVKPFAIDIFPVTNKDFRDFVREKKYRTEAEMFGWSFVFEDFVS 120
Query: 121 DELRNKATQPMKGKFP 136
DELRNKATQPMK P
Sbjct: 121 DELRNKATQPMKPAGP 136
Score = 224 bits (571), Expect = 5e-59
Identities = 112/146 (76%), Positives = 118/146 (80%), Gaps = 10/146 (6%)
Query: 98 REKKYRTEAEMFGWSFVFEDFVSDEL-------RNKATQPMKGKFPKGDKAEDGFHGVSP 150
R K+ TE E W F + ++ + T +GKFPKGDKAEDGFHGVSP
Sbjct: 163 RGKRLPTEEE---WEFAARGGLKGQVYPWGNWFQPNRTNLWQGKFPKGDKAEDGFHGVSP 219
Query: 151 VNAFPAQNNYGLYDLLGNVWEWTASPYQAAEQDMRVLRGASWIDTADGSANHRARVTTRM 210
VNAFPAQNNYGLYDLLGNVWEWTASPYQAAEQDMRVLRGASWIDTADGSANHRARVTTRM
Sbjct: 220 VNAFPAQNNYGLYDLLGNVWEWTASPYQAAEQDMRVLRGASWIDTADGSANHRARVTTRM 279
Query: 211 GNTPDSASDNLGFRCAADAGRPPGEL 236
GNTPDSASDNLGFRCAADAGRPPGEL
Sbjct: 280 GNTPDSASDNLGFRCAADAGRPPGEL 305
>gi|194248090 sulfatase modifying factor 2 isoform e precursor [Homo
sapiens]
Length = 358
Score = 269 bits (688), Expect = 1e-72
Identities = 132/132 (100%), Positives = 132/132 (100%)
Query: 1 MRAHAQRGRGCTRRSAAVLMARHGLPLLPLLSLLVGAWLKLGNGQATSMVQLQGGRFLMG 60
MRAHAQRGRGCTRRSAAVLMARHGLPLLPLLSLLVGAWLKLGNGQATSMVQLQGGRFLMG
Sbjct: 1 MRAHAQRGRGCTRRSAAVLMARHGLPLLPLLSLLVGAWLKLGNGQATSMVQLQGGRFLMG 60
Query: 61 TNSPDSRDGEGPVREATVKPFAIDIFPVTNKDFRDFVREKKYRTEAEMFGWSFVFEDFVS 120
TNSPDSRDGEGPVREATVKPFAIDIFPVTNKDFRDFVREKKYRTEAEMFGWSFVFEDFVS
Sbjct: 61 TNSPDSRDGEGPVREATVKPFAIDIFPVTNKDFRDFVREKKYRTEAEMFGWSFVFEDFVS 120
Query: 121 DELRNKATQPMK 132
DELRNKATQPMK
Sbjct: 121 DELRNKATQPMK 132
Score = 68.6 bits (166), Expect = 5e-12
Identities = 37/71 (52%), Positives = 43/71 (60%), Gaps = 10/71 (14%)
Query: 98 REKKYRTEAEMFGWSFVFEDFVSDEL-------RNKATQPMKGKFPKGDKAEDGFHGVSP 150
R K+ TE E W F + ++ + T +GKFPKGDKAEDGFHGVSP
Sbjct: 178 RGKRLPTEEE---WEFAARGGLKGQVYPWGNWFQPNRTNLWQGKFPKGDKAEDGFHGVSP 234
Query: 151 VNAFPAQNNYG 161
VNAFPAQNNYG
Sbjct: 235 VNAFPAQNNYG 245
>gi|194248088 sulfatase modifying factor 2 isoform b precursor [Homo
sapiens]
Length = 320
Score = 269 bits (688), Expect = 1e-72
Identities = 132/132 (100%), Positives = 132/132 (100%)
Query: 1 MRAHAQRGRGCTRRSAAVLMARHGLPLLPLLSLLVGAWLKLGNGQATSMVQLQGGRFLMG 60
MRAHAQRGRGCTRRSAAVLMARHGLPLLPLLSLLVGAWLKLGNGQATSMVQLQGGRFLMG
Sbjct: 1 MRAHAQRGRGCTRRSAAVLMARHGLPLLPLLSLLVGAWLKLGNGQATSMVQLQGGRFLMG 60
Query: 61 TNSPDSRDGEGPVREATVKPFAIDIFPVTNKDFRDFVREKKYRTEAEMFGWSFVFEDFVS 120
TNSPDSRDGEGPVREATVKPFAIDIFPVTNKDFRDFVREKKYRTEAEMFGWSFVFEDFVS
Sbjct: 61 TNSPDSRDGEGPVREATVKPFAIDIFPVTNKDFRDFVREKKYRTEAEMFGWSFVFEDFVS 120
Query: 121 DELRNKATQPMK 132
DELRNKATQPMK
Sbjct: 121 DELRNKATQPMK 132
Score = 224 bits (571), Expect = 5e-59
Identities = 112/146 (76%), Positives = 118/146 (80%), Gaps = 10/146 (6%)
Query: 98 REKKYRTEAEMFGWSFVFEDFVSDEL-------RNKATQPMKGKFPKGDKAEDGFHGVSP 150
R K+ TE E W F + ++ + T +GKFPKGDKAEDGFHGVSP
Sbjct: 178 RGKRLPTEEE---WEFAARGGLKGQVYPWGNWFQPNRTNLWQGKFPKGDKAEDGFHGVSP 234
Query: 151 VNAFPAQNNYGLYDLLGNVWEWTASPYQAAEQDMRVLRGASWIDTADGSANHRARVTTRM 210
VNAFPAQNNYGLYDLLGNVWEWTASPYQAAEQDMRVLRGASWIDTADGSANHRARVTTRM
Sbjct: 235 VNAFPAQNNYGLYDLLGNVWEWTASPYQAAEQDMRVLRGASWIDTADGSANHRARVTTRM 294
Query: 211 GNTPDSASDNLGFRCAADAGRPPGEL 236
GNTPDSASDNLGFRCAADAGRPPGEL
Sbjct: 295 GNTPDSASDNLGFRCAADAGRPPGEL 320
>gi|226437577 sulfatase modifying factor 2 isoform g [Homo sapiens]
Length = 213
Score = 224 bits (571), Expect = 5e-59
Identities = 112/146 (76%), Positives = 118/146 (80%), Gaps = 10/146 (6%)
Query: 98 REKKYRTEAEMFGWSFVFEDFVSDEL-------RNKATQPMKGKFPKGDKAEDGFHGVSP 150
R K+ TE E W F + ++ + T +GKFPKGDKAEDGFHGVSP
Sbjct: 71 RGKRLPTEEE---WEFAARGGLKGQVYPWGNWFQPNRTNLWQGKFPKGDKAEDGFHGVSP 127
Query: 151 VNAFPAQNNYGLYDLLGNVWEWTASPYQAAEQDMRVLRGASWIDTADGSANHRARVTTRM 210
VNAFPAQNNYGLYDLLGNVWEWTASPYQAAEQDMRVLRGASWIDTADGSANHRARVTTRM
Sbjct: 128 VNAFPAQNNYGLYDLLGNVWEWTASPYQAAEQDMRVLRGASWIDTADGSANHRARVTTRM 187
Query: 211 GNTPDSASDNLGFRCAADAGRPPGEL 236
GNTPDSASDNLGFRCAADAGRPPGEL
Sbjct: 188 GNTPDSASDNLGFRCAADAGRPPGEL 213
Score = 56.6 bits (135), Expect = 2e-08
Identities = 25/25 (100%), Positives = 25/25 (100%)
Query: 108 MFGWSFVFEDFVSDELRNKATQPMK 132
MFGWSFVFEDFVSDELRNKATQPMK
Sbjct: 1 MFGWSFVFEDFVSDELRNKATQPMK 25
>gi|38202250 sulfatase modifying factor 1 [Homo sapiens]
Length = 374
Score = 86.7 bits (213), Expect = 2e-17
Identities = 47/110 (42%), Positives = 67/110 (60%), Gaps = 16/110 (14%)
Query: 132 KGKFPKGDKAEDGFHGVSPVNAFPAQNNYGLYDLLGNVWEWTA---SPYQAAEQDM---- 184
+G+FP + EDGF G +PV+AFP N YGLY+++GN WEWT+ + + + E+ +
Sbjct: 262 QGEFPVTNTGEDGFQGTAPVDAFPP-NGYGLYNIVGNAWEWTSDWWTVHHSVEETLNPKG 320
Query: 185 ------RVLRGASWIDTADGSANHRARVTTRMGNTPDSASDNLGFRCAAD 228
RV +G S++ S +R R R NTPDS++ NLGFRCAAD
Sbjct: 321 PPSGKDRVKKGGSYM--CHRSYCYRYRCAARSQNTPDSSASNLGFRCAAD 368
Score = 70.9 bits (172), Expect = 9e-13
Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 47 TSMVQLQGGRFLMGTNSPD-SRDGEGPVREATVKPFAIDIFPVTNKDFRDFVREKKYRTE 105
+ MV + G F MGT+ P +DGE P R T+ F +D + V+N +F FV Y TE
Sbjct: 89 SKMVPIPAGVFTMGTDDPQIKQDGEAPARRVTIDAFYMDAYEVSNTEFEKFVNSTGYLTE 148
Query: 106 AEMFGWSFVFEDFVSDELRNKATQ 129
AE FG SFVFE +S++++ Q
Sbjct: 149 AEKFGDSFVFEGMLSEQVKTNIQQ 172
>gi|4758062 cytokine receptor-like factor 1 [Homo sapiens]
Length = 422
Score = 29.6 bits (65), Expect = 2.4
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 13 RRSAAVLMARHGLPLLPLLSLL--VGAWLKLGNGQATSMVQLQGGRFLMGTN 62
RR A AR PLLPLL LL +GA + G+G T+++ Q L+G++
Sbjct: 5 RRGPAAQSARRPPPLLPLLLLLCVLGA-PRAGSGAHTAVISPQDPTLLIGSS 55
>gi|4507399 transcription factor 4 isoform b [Homo sapiens]
Length = 667
Score = 28.1 bits (61), Expect = 6.9
Identities = 14/52 (26%), Positives = 22/52 (42%)
Query: 117 DFVSDELRNKATQPMKGKFPKGDKAEDGFHGVSPVNAFPAQNNYGLYDLLGN 168
D+ D +++P FP +DG H P ++ N G +LGN
Sbjct: 193 DYNRDSPGYPSSKPATSTFPSSFFMQDGHHSSDPWSSSSGMNQPGYAGMLGN 244
>gi|145312267 transcription factor 4 isoform a [Homo sapiens]
Length = 671
Score = 28.1 bits (61), Expect = 6.9
Identities = 14/52 (26%), Positives = 22/52 (42%)
Query: 117 DFVSDELRNKATQPMKGKFPKGDKAEDGFHGVSPVNAFPAQNNYGLYDLLGN 168
D+ D +++P FP +DG H P ++ N G +LGN
Sbjct: 193 DYNRDSPGYPSSKPATSTFPSSFFMQDGHHSSDPWSSSSGMNQPGYAGMLGN 244
>gi|157412255 praja 2, RING-H2 motif containing [Homo sapiens]
Length = 708
Score = 27.7 bits (60), Expect = 9.0
Identities = 26/115 (22%), Positives = 44/115 (38%), Gaps = 17/115 (14%)
Query: 116 EDFVSDELRNKATQPMKGKFPKGDKAEDGFHGVSPVNAFPAQNNYGLYDLLGNVWEWTAS 175
++ VS + +N +Q + + D A H S N + N+G +S
Sbjct: 262 DEMVSTKQQNNTSQERQTEHSPEDAACGPGHICSEQNTNDREKNHG------------SS 309
Query: 176 PYQAAEQDMRVLRGASWIDTADGSANHRARVTT-----RMGNTPDSASDNLGFRC 225
P Q +R L +S +D G H A+ + +S SD+L +C
Sbjct: 310 PEQVVRPKVRKLISSSQVDQETGFNRHEAKQRSVQRWREALEVEESGSDDLLIKC 364
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,558,086
Number of Sequences: 37866
Number of extensions: 401784
Number of successful extensions: 827
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 812
Number of HSP's gapped (non-prelim): 15
length of query: 236
length of database: 18,247,518
effective HSP length: 99
effective length of query: 137
effective length of database: 14,498,784
effective search space: 1986333408
effective search space used: 1986333408
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.