Search of human proteins with 190684667

Search of human proteins with 190684667

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|190684667 hypothetical protein LOC162681 [Homo sapiens]
         (372 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|190684667 hypothetical protein LOC162681 [Homo sapiens]            756   0.0  
gi|114796630 homeodomain interacting protein kinase 3 isoform 2 ...    44   3e-04
gi|31377581 hypothetical protein LOC124989 [Homo sapiens]              37   0.022
gi|114796624 homeodomain interacting protein kinase 3 isoform 1 ...    33   0.32 
gi|178056552 non-SMC condensin I complex, subunit D2 [Homo sapiens]    33   0.54 
gi|34335262 zinc finger, MYND-type containing 8 isoform a [Homo ...    32   0.70 
gi|34335266 zinc finger, MYND-type containing 8 isoform b [Homo ...    32   0.70 
gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo...    32   1.2  
gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo...    32   1.2  
gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo...    32   1.2  
gi|150170718 zinc finger protein 292 [Homo sapiens]                    31   1.6  
gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo s...    31   2.0  
gi|7662018 PHD finger protein 3 [Homo sapiens]                         31   2.0  
gi|16262452 cingulin [Homo sapiens]                                    30   3.5  
gi|19923229 protein phosphatase 2, regulatory subunit B'', alpha...    29   6.0  
gi|26080431 ATPase family, AAA domain containing 5 [Homo sapiens]      29   7.8  
gi|48525351 patatin-like phospholipase domain containing 8 [Homo...    29   7.8  
gi|14424433 ATPase, class V, type 10A [Homo sapiens]                   29   7.8  

>gi|190684667 hypothetical protein LOC162681 [Homo sapiens]
          Length = 372

 Score =  756 bits (1951), Expect = 0.0
 Identities = 372/372 (100%), Positives = 372/372 (100%)

Query: 1   MAKSKTKHRLCSQESSVSALLASCTLSGSNSSNSDGSFHYKDKLYRSASQALQAYIDDFD 60
           MAKSKTKHRLCSQESSVSALLASCTLSGSNSSNSDGSFHYKDKLYRSASQALQAYIDDFD
Sbjct: 1   MAKSKTKHRLCSQESSVSALLASCTLSGSNSSNSDGSFHYKDKLYRSASQALQAYIDDFD 60

Query: 61  LGQIYPGASTGKINIDEDFTNMSQFCNYIYKPNNAFENLDHKKHSNFISCRRHTVNDIDS 120
           LGQIYPGASTGKINIDEDFTNMSQFCNYIYKPNNAFENLDHKKHSNFISCRRHTVNDIDS
Sbjct: 61  LGQIYPGASTGKINIDEDFTNMSQFCNYIYKPNNAFENLDHKKHSNFISCRRHTVNDIDS 120

Query: 121 MSLTTDDLLRLPADGSFSYTYVGPSHRTSKKNKKCRGRLGSLDIEKNPHFQGPYTSMGKD 180
           MSLTTDDLLRLPADGSFSYTYVGPSHRTSKKNKKCRGRLGSLDIEKNPHFQGPYTSMGKD
Sbjct: 121 MSLTTDDLLRLPADGSFSYTYVGPSHRTSKKNKKCRGRLGSLDIEKNPHFQGPYTSMGKD 180

Query: 181 NFVTPVIRSNINGKQCGDKIELLILKAKRNLEQCTEELPKSMKKDDSPCSLDKLEADRSW 240
           NFVTPVIRSNINGKQCGDKIELLILKAKRNLEQCTEELPKSMKKDDSPCSLDKLEADRSW
Sbjct: 181 NFVTPVIRSNINGKQCGDKIELLILKAKRNLEQCTEELPKSMKKDDSPCSLDKLEADRSW 240

Query: 241 ENIPVTFKSPVPVNSDDSPQQTSRAKSAKGVLEDFLNNDNQSCTLSGGKHHGPVEALKQM 300
           ENIPVTFKSPVPVNSDDSPQQTSRAKSAKGVLEDFLNNDNQSCTLSGGKHHGPVEALKQM
Sbjct: 241 ENIPVTFKSPVPVNSDDSPQQTSRAKSAKGVLEDFLNNDNQSCTLSGGKHHGPVEALKQM 300

Query: 301 LFNLQAVQERFNQNKTTDPKEEIKQVSEDDFSKLQLKESMIPITRSLQKALHHLSRLRDL 360
           LFNLQAVQERFNQNKTTDPKEEIKQVSEDDFSKLQLKESMIPITRSLQKALHHLSRLRDL
Sbjct: 301 LFNLQAVQERFNQNKTTDPKEEIKQVSEDDFSKLQLKESMIPITRSLQKALHHLSRLRDL 360

Query: 361 VDDTNGERSPKM 372
           VDDTNGERSPKM
Sbjct: 361 VDDTNGERSPKM 372


>gi|114796630 homeodomain interacting protein kinase 3 isoform 2
           [Homo sapiens]
          Length = 1194

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 51/191 (26%), Positives = 79/191 (41%), Gaps = 29/191 (15%)

Query: 108 ISCRRHTVNDIDSMSLTTDDLLRLPADGSFSYTYV-GPSHRTSKKNKKCRGRLGSLDIEK 166
           ISC  H  + +    LT    L  P   S    +V  P   T+KKNK+C+ R  SL    
Sbjct: 718 ISCSNHYNSVMPQPLLTNQITLSAPQPVSVGIAHVVWPQPATTKKNKQCQNRSNSLQNTN 777

Query: 167 NPHFQGPYTSMGKDNFVTPVIRSNINGKQCGDKIELLILKAKRNLE----QCTEELPKSM 222
            PH            F++P I   INGK   +++  +  +  +N E     C E    S+
Sbjct: 778 IPH----------SAFISPKI---INGKDV-EEVSCIETQDNQNSEGEARNCCE---TSI 820

Query: 223 KKDDSPCSLDKLEADRSWENIPVTFKSPVPVNSDDSPQQTSRAKS---AKGVLE----DF 275
           ++D      DK        + P    S + ++SD   ++TS+  S    KG L+      
Sbjct: 821 RQDSDSSVSDKQRQTIIIADSPSPAVSVITISSDTDEEETSQRHSLRECKGSLDCEACQS 880

Query: 276 LNNDNQSCTLS 286
             N ++ C+LS
Sbjct: 881 TLNIDRMCSLS 891


>gi|31377581 hypothetical protein LOC124989 [Homo sapiens]
          Length = 973

 Score = 37.4 bits (85), Expect = 0.022
 Identities = 41/177 (23%), Positives = 72/177 (40%), Gaps = 20/177 (11%)

Query: 185 PVIRSNINGKQCGDKIELLILKAKRNLEQCTEELPKSMKKDDSPCSLDKLEADRSWENIP 244
           P  ++ IN K+  +K E+   K+K    + +  L KS+ K D               +IP
Sbjct: 383 PYSKNGINFKKHSEKGEIHDSKSKPQSLKSSTSLSKSLDKSDI-------------SSIP 429

Query: 245 VTFKSPVPVNSDDSPQQTSRAKSAKGVLEDFLNNDNQSCTLSGGKHHGPVEALKQML--F 302
              K  V  +S    Q +S  K+A   LE+F    ++       +++   E L+ +L   
Sbjct: 430 KLQKPAVRKHSSLQKQVSSTEKTAISTLENFCEAISKL-----QENYIAAEELQSILPST 484

Query: 303 NLQAVQERFNQNKTTDPKEEIKQVSEDDFSKLQLKESMIPITRSLQKALHHLSRLRD 359
            +  + E F +  T   + E   V  DDF     KE   P   +L   +  + +++D
Sbjct: 485 GINLLDEEFQKIVTDTSRNENGMVELDDFVNALAKERSFPECNALPGVIKAIDKIKD 541


>gi|114796624 homeodomain interacting protein kinase 3 isoform 1
           [Homo sapiens]
          Length = 1215

 Score = 33.5 bits (75), Expect = 0.32
 Identities = 53/203 (26%), Positives = 84/203 (41%), Gaps = 32/203 (15%)

Query: 108 ISCRRHTVNDIDSMSLTTDDLLRLPADGSFSYTYV-GPSHRTSKKNKKC--RGRLGSLDI 164
           ISC  H  + +    LT    L  P   S    +V  P   T+KKNK+C  RG L  L +
Sbjct: 718 ISCSNHYNSVMPQPLLTNQITLSAPQPVSVGIAHVVWPQPATTKKNKQCQNRGILVKL-M 776

Query: 165 EKNPHFQG----------PYTSMGKDNFVTPVIRSNINGKQCGDKIELLILKAKRNLE-- 212
           E  P  +             T++    F++P I   INGK   +++  +  +  +N E  
Sbjct: 777 EWEPGREEINAFSWSNSLQNTNIPHSAFISPKI---INGKDV-EEVSCIETQDNQNSEGE 832

Query: 213 --QCTEELPKSMKKDDSPCSLDKLEADRSWENIPVTFKSPVPVNSDDSPQQTSRAKS--- 267
              C E    S+++D      DK        + P    S + ++SD   ++TS+  S   
Sbjct: 833 ARNCCE---TSIRQDSDSSVSDKQRQTIIIADSPSPAVSVITISSDTDEEETSQRHSLRE 889

Query: 268 AKGVLE----DFLNNDNQSCTLS 286
            KG L+        N ++ C+LS
Sbjct: 890 CKGSLDCEACQSTLNIDRMCSLS 912


>gi|178056552 non-SMC condensin I complex, subunit D2 [Homo sapiens]
          Length = 1401

 Score = 32.7 bits (73), Expect = 0.54
 Identities = 22/70 (31%), Positives = 35/70 (50%)

Query: 266 KSAKGVLEDFLNNDNQSCTLSGGKHHGPVEALKQMLFNLQAVQERFNQNKTTDPKEEIKQ 325
           K+A  +L  FL N+  SC LS     GP++   Q L  ++A +     +   DP+EE + 
Sbjct: 422 KNAIQLLASFLANNPFSCKLSDADLAGPLQKETQKLQEMRAQRRTAAASAVLDPEEEWEA 481

Query: 326 VSEDDFSKLQ 335
           +  +  S LQ
Sbjct: 482 MLPELKSTLQ 491


>gi|34335262 zinc finger, MYND-type containing 8 isoform a [Homo
           sapiens]
          Length = 1188

 Score = 32.3 bits (72), Expect = 0.70
 Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 17/85 (20%)

Query: 247 FKSPVPVNSDDSPQQTSRAKSAKGVLEDFLNNDNQSCTLSGGKHHGPVEALKQMLFNLQA 306
           F SP   ++  SPQ TS +   K      LN++N+         HGP   +KQ L     
Sbjct: 42  FPSPPHSSNGHSPQDTSTSPIKKKKKPGLLNSNNKE---QSELRHGPFYYMKQPL----- 93

Query: 307 VQERFNQNKTTDPKEEIKQVSEDDF 331
                    TTDP + + Q   +DF
Sbjct: 94  ---------TTDPVDVVPQDGRNDF 109


>gi|34335266 zinc finger, MYND-type containing 8 isoform b [Homo
           sapiens]
          Length = 1160

 Score = 32.3 bits (72), Expect = 0.70
 Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 17/85 (20%)

Query: 247 FKSPVPVNSDDSPQQTSRAKSAKGVLEDFLNNDNQSCTLSGGKHHGPVEALKQMLFNLQA 306
           F SP   ++  SPQ TS +   K      LN++N+         HGP   +KQ L     
Sbjct: 42  FPSPPHSSNGHSPQDTSTSPIKKKKKPGLLNSNNKE---QSELRHGPFYYMKQPL----- 93

Query: 307 VQERFNQNKTTDPKEEIKQVSEDDF 331
                    TTDP + + Q   +DF
Sbjct: 94  ---------TTDPVDVVPQDGRNDF 109


>gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo
            sapiens]
          Length = 1939

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 44/220 (20%), Positives = 95/220 (43%), Gaps = 18/220 (8%)

Query: 161  SLDIEKNPHFQGPYTSMGKDNFVTPVIRSNINGKQC-GDKIELLILKAKRNLEQCTEELP 219
            ++DIE +   Q     + K  F    ++S I  +Q  G +++  I + +  +E+  EE+ 
Sbjct: 1070 TMDIENDK--QQLDEKLKKKEFEMSGLQSKIEDEQALGMQLQKKIKELQARIEELEEEIE 1127

Query: 220  KSM------KKDDSPCSLDKLEADRSWENIPVTFKSPVPVNSDDSPQQTSRAKSAKGVLE 273
                     +K  S  S +  E     E       + + +N     ++    K  + + E
Sbjct: 1128 AERASRAKAEKQRSDLSRELEEISERLEEAGGATSAQIEMNKK---REAEFQKMRRDLEE 1184

Query: 274  DFLNNDNQSCTLSGGKHHGPVEALKQMLFNLQAVQERFNQNKTTDPKEEIKQVSEDDFSK 333
              L ++  + TL   KH   V  L + + NLQ V+++  + K ++ K EI  ++ +  + 
Sbjct: 1185 ATLQHEATAATLRK-KHADSVAELGEQIDNLQRVKQKLEKEK-SEMKMEIDDLASNMETV 1242

Query: 334  LQLKESMIPITRSLQKALHHLSRLRD----LVDDTNGERS 369
             + K ++  + R+L+  L  +    +    L++D   +R+
Sbjct: 1243 SKAKGNLEKMCRALEDQLSEIKTKEEEQQRLINDLTAQRA 1282


>gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo
            sapiens]
          Length = 1941

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 41/201 (20%), Positives = 86/201 (42%), Gaps = 16/201 (7%)

Query: 179  KDNFVTPVIRSNINGKQC-GDKIELLILKAKRNLEQCTEELPKSM------KKDDSPCSL 231
            K  F    ++S I  +Q  G +++  I + +  +E+  EE+          +K  S  S 
Sbjct: 1088 KKEFEISNLQSKIEDEQALGIQLQKKIKELQARIEELEEEIEAERASRAKAEKQRSDLSR 1147

Query: 232  DKLEADRSWENIPVTFKSPVPVNSDDSPQQTSRAKSAKGVLEDFLNNDNQSCTLSGGKHH 291
            +  E     E       + + +N     ++    K  + + E  L ++  + TL   KH 
Sbjct: 1148 ELEEISERLEEAGGATSAQIEMNKK---REAEFQKMRRDLEEATLQHEATAATLRK-KHA 1203

Query: 292  GPVEALKQMLFNLQAVQERFNQNKTTDPKEEIKQVSEDDFSKLQLKESMIPITRSLQKAL 351
              V  L + + NLQ V+++  + K ++ K EI  ++ +  +  + K ++  + R+L+  L
Sbjct: 1204 DSVAELGEQIDNLQRVKQKLEKEK-SEMKMEIDDLASNVETVSKAKGNLEKMCRTLEDQL 1262

Query: 352  HHLSRLRD----LVDDTNGER 368
              L    +    L++D   +R
Sbjct: 1263 SELKSKEEEQQRLINDLTAQR 1283


>gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo
            sapiens]
          Length = 1941

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 41/201 (20%), Positives = 86/201 (42%), Gaps = 16/201 (7%)

Query: 179  KDNFVTPVIRSNINGKQC-GDKIELLILKAKRNLEQCTEELPKSM------KKDDSPCSL 231
            K  F    ++S I  +Q  G +++  I + +  +E+  EE+          +K  S  S 
Sbjct: 1088 KKEFEISNLQSKIEDEQALGIQLQKKIKELQARIEELEEEIEAERASRAKAEKQRSDLSR 1147

Query: 232  DKLEADRSWENIPVTFKSPVPVNSDDSPQQTSRAKSAKGVLEDFLNNDNQSCTLSGGKHH 291
            +  E     E       + + +N     ++    K  + + E  L ++  + TL   KH 
Sbjct: 1148 ELEEISERLEEAGGATSAQIEMNKK---REAEFQKMRRDLEEATLQHEATAATLRK-KHA 1203

Query: 292  GPVEALKQMLFNLQAVQERFNQNKTTDPKEEIKQVSEDDFSKLQLKESMIPITRSLQKAL 351
              V  L + + NLQ V+++  + K ++ K EI  ++ +  +  + K ++  + R+L+  L
Sbjct: 1204 DSVAELGEQIDNLQRVKQKLEKEK-SEMKMEIDDLASNVETVSKAKGNLEKMCRTLEDQL 1262

Query: 352  HHLSRLRD----LVDDTNGER 368
              L    +    L++D   +R
Sbjct: 1263 SELKSKEEEQQRLINDLTAQR 1283


>gi|150170718 zinc finger protein 292 [Homo sapiens]
          Length = 2723

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 15/91 (16%)

Query: 145  SHRTSKKNKKCRGRLGSLDIEKNPHFQGPYTSMGKDNFVTPVIRSNINGKQCGDKIELLI 204
            SH  S+KN           I+K     G +    K++  T V  +N +  QC D +++++
Sbjct: 2623 SHSNSRKN-----------IDKTAVTSGNHVCPCKES-ETFVQFANPSQLQCSDNVKIVL 2670

Query: 205  LKAKRNLEQCTEELPKSMKKDDSPCSLDKLE 235
             K   NL+ CTE + K +++     SL KLE
Sbjct: 2671 DK---NLKDCTELVLKQLQEMKPTVSLKKLE 2698


>gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo
            sapiens]
          Length = 1935

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 37/201 (18%), Positives = 90/201 (44%), Gaps = 14/201 (6%)

Query: 179  KDNFVTPVIRSNINGKQC-GDKIELLILKAKRNLEQCTEELPKSMKKDDSPCSLDKLEAD 237
            K +F    + + I  +Q  G +++  + + +  +E+  EEL        +   ++KL +D
Sbjct: 1082 KKDFELNALNARIEDEQALGSQLQKKLKELQARIEELEEELEAERT---ARAKVEKLRSD 1138

Query: 238  RSWENIPVTFK-----SPVPVNSDDSPQQTSRAKSAKGVLEDFLNNDNQSCTLSGGKHHG 292
             S E   ++ +         V  + + ++ +  +  +  LE+       +      KH  
Sbjct: 1139 LSRELEEISERLEEAGGATSVQIEMNKKREAEFQKMRRDLEEATLQHEATAAALRKKHAD 1198

Query: 293  PVEALKQMLFNLQAVQERFNQNKTTDPKEEIKQVSEDDFSKLQLKESMIPITRSLQKALH 352
             V  L + + NLQ V+++  + K ++ K E+  V+ +    ++ K ++  + R+L+  ++
Sbjct: 1199 SVAELGEQIDNLQRVKQKLEKEK-SEFKLELDDVTSNMEQIIKAKANLEKMCRTLEDQMN 1257

Query: 353  -HLSRLRDL---VDDTNGERS 369
             H S+  +    V+D   +R+
Sbjct: 1258 EHRSKAEETQRSVNDLTSQRA 1278


>gi|7662018 PHD finger protein 3 [Homo sapiens]
          Length = 2039

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 34/146 (23%), Positives = 59/146 (40%), Gaps = 29/146 (19%)

Query: 149  SKKNKKCRGRLGSLDIEKN--------------PHF----QGPYTSMGKDNFVTPVIRSN 190
            +  +  CR  +G  +I+ N              P F    + P  + G+   VT     +
Sbjct: 1610 TSNSSPCRSNVGKGNIDGNVSCSENLVANTARSPQFINLKRDPRQAAGRSQPVTT--SES 1667

Query: 191  INGKQCGDKIELLILKAKRNLEQCTEELPKSMKKDDSPCSLDKLEADRSWENIPVTFKSP 250
             +G  C +  + ++     N E  TE++      ++  CS +K    +  +N+ V   SP
Sbjct: 1668 KDGDSCRNGEKHMLPGLSHNKEHLTEQI----NVEEKLCSAEKNSCVQQSDNLKVAQNSP 1723

Query: 251  VPVNSDDSPQQTSRAKSAKGVLEDFL 276
               N      QTS+A+ AK + ED L
Sbjct: 1724 SVENI-----QTSQAEQAKPLQEDIL 1744


>gi|16262452 cingulin [Homo sapiens]
          Length = 1203

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 16/56 (28%), Positives = 32/56 (57%), Gaps = 1/56 (1%)

Query: 313 QNKTTDPKEEIKQVSEDDFSKLQ-LKESMIPITRSLQKALHHLSRLRDLVDDTNGE 367
           Q + T   EE+++  +++  K Q L+ S + + R L++     SRL++L++   GE
Sbjct: 361 QGELTRKVEELQRKLDEEVKKRQKLEPSQVGLERQLEEKTEECSRLQELLERRKGE 416


>gi|19923229 protein phosphatase 2, regulatory subunit B'', alpha
           isoform 1 [Homo sapiens]
          Length = 1150

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 30/137 (21%), Positives = 61/137 (44%), Gaps = 15/137 (10%)

Query: 95  AFENLDHKKHSNFISCRRHTVNDIDSMSLTTDDLLRLPADGSFSYTYVGPSH---RTSKK 151
           +FE L +  H+ +   R+   +  +  S+  D L      G ++     PS    R+S  
Sbjct: 128 SFEKLKNSNHAAYRKGRKVKSDSFNRRSVDLDLLC-----GHYNNDGNAPSFGLLRSSSV 182

Query: 152 NKKCRGRLGSLDIEKNPHFQGPYTSMGKDNFVTPVIRSN-INGKQCGDKIEL---LILKA 207
            +K      SLD      F     +  +++ VT ++  + I+    G  I++   ++LK 
Sbjct: 183 EEKPLSHRNSLDTNLTSMF---LQNFSEEDLVTQILEKHKIDNFSSGTDIKMCLDILLKC 239

Query: 208 KRNLEQCTEELPKSMKK 224
             +L++CT+ + + +KK
Sbjct: 240 SEDLKKCTDIIKQCIKK 256


>gi|26080431 ATPase family, AAA domain containing 5 [Homo sapiens]
          Length = 1844

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 26/117 (22%)

Query: 242 NIPVTFKSPVPVNSDDSPQQTSRAKSAKGVLEDFLNNDNQSCTLSGGKHHGPVEALKQML 301
           NI    ++P+ ++SDDS +  S            LNND    + S  ++   VE L +  
Sbjct: 125 NIKTENEAPIEISSDDSKEDYS------------LNNDFVESSTSVLRYKKQVEVLAE-- 170

Query: 302 FNLQAVQERFN------QNKTTDPKEEIKQVSEDDFSKLQLKE--SMIPITRSLQKA 350
            N+Q  + + N       +K  +PK+     +++DF KL+ ++   ++ ++ SL  A
Sbjct: 171 -NIQDTKSQPNTMTSLQNSKKVNPKQ---GTTKNDFKKLRKRKCRDVVDLSESLPLA 223


>gi|48525351 patatin-like phospholipase domain containing 8 [Homo
           sapiens]
          Length = 782

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 8/111 (7%)

Query: 254 NSDDSPQQTSRAKSAKGVLEDFLNNDNQSCTLSGGKHHGPVEALKQMLFNLQAVQERFNQ 313
           +   S +Q   AK+ + V +D    + +  +L   K    V    +    +QA++     
Sbjct: 317 SKSQSEEQEEPAKTDQAVSKDRNAEEKKRLSLQREKIIARVSIDNRTRALVQALR----- 371

Query: 314 NKTTDPKEEIKQVSEDDFSKLQLKESMIPITRSLQKALHHLSRLRDLVDDT 364
            +TTDPK  I +V E  F  L+  E      +  ++ + +L RLR + D+T
Sbjct: 372 -RTTDPKLCITRVEELTFHLLEFPEGKGVAVK--ERIIPYLLRLRQIKDET 419


>gi|14424433 ATPase, class V, type 10A [Homo sapiens]
          Length = 1499

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 4/60 (6%)

Query: 243 IPVTFKSPVPVNSDDSPQQTSRA----KSAKGVLEDFLNNDNQSCTLSGGKHHGPVEALK 298
           I +T  + V V S D P+   R     KS    +EDFL     SC  SG    G + A K
Sbjct: 573 IALTICNTVVVTSPDQPRTKVRVRFELKSPVKTIEDFLRRFTPSCLTSGCSSIGSLAANK 632


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.313    0.129    0.371 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,495,967
Number of Sequences: 37866
Number of extensions: 631225
Number of successful extensions: 1517
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1509
Number of HSP's gapped (non-prelim): 22
length of query: 372
length of database: 18,247,518
effective HSP length: 104
effective length of query: 268
effective length of database: 14,309,454
effective search space: 3834933672
effective search space used: 3834933672
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.