Search of human proteins with 189571654

Search of human proteins with 189571654

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|189571654 leptin receptor overlapping transcript-like 1
isoform 2 [Homo sapiens]
         (169 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|189571654 leptin receptor overlapping transcript-like 1 isofo...   336   6e-93
gi|189571652 leptin receptor overlapping transcript-like 1 isofo...   189   1e-48
gi|8923785 leptin receptor gene-related protein [Homo sapiens]        130   7e-31
gi|17998700 phosphatidylinositol glycan anchor biosynthesis, cla...    32   0.20 
gi|239757474 PREDICTED: similar to hCG1785205 [Homo sapiens]           28   4.9  
gi|239751984 PREDICTED: similar to hCG1785205 [Homo sapiens]           28   4.9  
gi|239746471 PREDICTED: hypothetical protein XP_002343764 [Homo ...    28   4.9  

>gi|189571654 leptin receptor overlapping transcript-like 1 isoform
           2 [Homo sapiens]
          Length = 169

 Score =  336 bits (861), Expect = 6e-93
 Identities = 169/169 (100%), Positives = 169/169 (100%)

Query: 1   MAGIKALISLSFGGAIGLMFLMLGCALPIYNKYWPLFVLFFYILSPIPYCIARRLVDDTD 60
           MAGIKALISLSFGGAIGLMFLMLGCALPIYNKYWPLFVLFFYILSPIPYCIARRLVDDTD
Sbjct: 1   MAGIKALISLSFGGAIGLMFLMLGCALPIYNKYWPLFVLFFYILSPIPYCIARRLVDDTD 60

Query: 61  AMSNACKELAIFLTTGIVVSAFGLPIVFARAHLMGRLPFFSKMGTAESEGRETLTQQLPL 120
           AMSNACKELAIFLTTGIVVSAFGLPIVFARAHLMGRLPFFSKMGTAESEGRETLTQQLPL
Sbjct: 61  AMSNACKELAIFLTTGIVVSAFGLPIVFARAHLMGRLPFFSKMGTAESEGRETLTQQLPL 120

Query: 121 PAAAMRRLLPASRVSTQPVLRLADSAESLLGRPALWALGFLLCPPSQAQ 169
           PAAAMRRLLPASRVSTQPVLRLADSAESLLGRPALWALGFLLCPPSQAQ
Sbjct: 121 PAAAMRRLLPASRVSTQPVLRLADSAESLLGRPALWALGFLLCPPSQAQ 169


>gi|189571652 leptin receptor overlapping transcript-like 1
          isoform 1 [Homo sapiens]
          Length = 131

 Score =  189 bits (480), Expect = 1e-48
 Identities = 93/94 (98%), Positives = 94/94 (100%)

Query: 1  MAGIKALISLSFGGAIGLMFLMLGCALPIYNKYWPLFVLFFYILSPIPYCIARRLVDDTD 60
          MAGIKALISLSFGGAIGLMFLMLGCALPIYNKYWPLFVLFFYILSPIPYCIARRLVDDTD
Sbjct: 1  MAGIKALISLSFGGAIGLMFLMLGCALPIYNKYWPLFVLFFYILSPIPYCIARRLVDDTD 60

Query: 61 AMSNACKELAIFLTTGIVVSAFGLPIVFARAHLM 94
          AMSNACKELAIFLTTGIVVSAFGLPIVFARAHL+
Sbjct: 61 AMSNACKELAIFLTTGIVVSAFGLPIVFARAHLI 94


>gi|8923785 leptin receptor gene-related protein [Homo sapiens]
          Length = 131

 Score =  130 bits (326), Expect = 7e-31
 Identities = 61/90 (67%), Positives = 74/90 (82%)

Query: 1  MAGIKALISLSFGGAIGLMFLMLGCALPIYNKYWPLFVLFFYILSPIPYCIARRLVDDTD 60
          MAG+KAL++LSF GAIGL FLMLGCAL  Y  YWPLFVL F+ +SPIP+ IA+R+  D+D
Sbjct: 1  MAGVKALVALSFSGAIGLTFLMLGCALEDYGVYWPLFVLIFHAISPIPHFIAKRVTYDSD 60

Query: 61 AMSNACKELAIFLTTGIVVSAFGLPIVFAR 90
          A S+AC+ELA F TTGIVVSAFG P++ AR
Sbjct: 61 ATSSACRELAYFFTTGIVVSAFGFPVILAR 90


>gi|17998700 phosphatidylinositol glycan anchor biosynthesis, class
           U [Homo sapiens]
          Length = 435

 Score = 32.3 bits (72), Expect = 0.20
 Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 4/71 (5%)

Query: 28  PIYNKYWPLFVLFFYILSPIPYCIARRLVDDTDAMSNACKELAIFLTTGIVVSAFGLPIV 87
           P+  +Y PL V  FY+L+  PY I   +   T A++N    +A F+ T I  SAF   I 
Sbjct: 130 PMEMRYIPLKVALFYLLN--PYTILSCVAKSTCAINNTL--IAFFILTTIKGSAFLSAIF 185

Query: 88  FARAHLMGRLP 98
            A A      P
Sbjct: 186 LALATYQSLYP 196


>gi|239757474 PREDICTED: similar to hCG1785205 [Homo sapiens]
          Length = 362

 Score = 27.7 bits (60), Expect = 4.9
 Identities = 30/98 (30%), Positives = 38/98 (38%), Gaps = 6/98 (6%)

Query: 70  AIFLTTGI------VVSAFGLPIVFARAHLMGRLPFFSKMGTAESEGRETLTQQLPLPAA 123
           A++LTTG          A   P+  A   L  R+   S     E+ GR     +L   AA
Sbjct: 149 ALWLTTGARHRTSKTSGAQCPPMTSATCLLAARVALLSAALVREATGRTAQRCRLSPRAA 208

Query: 124 AMRRLLPASRVSTQPVLRLADSAESLLGRPALWALGFL 161
           A R L P   V+  PVL   +  E       L   GFL
Sbjct: 209 AERLLGPPPHVAAGPVLAQPNKVERRRTCHLLNTRGFL 246


>gi|239751984 PREDICTED: similar to hCG1785205 [Homo sapiens]
          Length = 362

 Score = 27.7 bits (60), Expect = 4.9
 Identities = 30/98 (30%), Positives = 38/98 (38%), Gaps = 6/98 (6%)

Query: 70  AIFLTTGI------VVSAFGLPIVFARAHLMGRLPFFSKMGTAESEGRETLTQQLPLPAA 123
           A++LTTG          A   P+  A   L  R+   S     E+ GR     +L   AA
Sbjct: 149 ALWLTTGARHRTSKTSGAQCPPMTSATCLLAARVALLSAALVREATGRTAQRCRLSPRAA 208

Query: 124 AMRRLLPASRVSTQPVLRLADSAESLLGRPALWALGFL 161
           A R L P   V+  PVL   +  E       L   GFL
Sbjct: 209 AERLLGPPPHVAAGPVLAQPNKVERRRTCHLLNTRGFL 246


>gi|239746471 PREDICTED: hypothetical protein XP_002343764 [Homo
           sapiens]
          Length = 362

 Score = 27.7 bits (60), Expect = 4.9
 Identities = 30/98 (30%), Positives = 38/98 (38%), Gaps = 6/98 (6%)

Query: 70  AIFLTTGI------VVSAFGLPIVFARAHLMGRLPFFSKMGTAESEGRETLTQQLPLPAA 123
           A++LTTG          A   P+  A   L  R+   S     E+ GR     +L   AA
Sbjct: 149 ALWLTTGARHRTSKTSGAQCPPMTSATCLLAARVALLSAALVREATGRTAQRCRLSPRAA 208

Query: 124 AMRRLLPASRVSTQPVLRLADSAESLLGRPALWALGFL 161
           A R L P   V+  PVL   +  E       L   GFL
Sbjct: 209 AERLLGPPPHVAAGPVLAQPNKVERRRTCHLLNTRGFL 246


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.329    0.141    0.435 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,933,202
Number of Sequences: 37866
Number of extensions: 239419
Number of successful extensions: 685
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 682
Number of HSP's gapped (non-prelim): 7
length of query: 169
length of database: 18,247,518
effective HSP length: 95
effective length of query: 74
effective length of database: 14,650,248
effective search space: 1084118352
effective search space used: 1084118352
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.