Search of human proteins with 189458812

Search of human proteins with 189458812

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|189458812 glucan (1,4-alpha-), branching enzyme 1 [Homo
sapiens]
         (702 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|189458812 glucan (1,4-alpha-), branching enzyme 1 [Homo sapiens]  1473   0.0  
gi|58386720 oviductal glycoprotein 1 precursor [Homo sapiens]          37   0.048
gi|187423904 solute carrier family 3, member 1 [Homo sapiens]          32   1.5  
gi|41281583 Histidine acid phosphatase domain containing 1 [Homo...    31   4.5  
gi|40316939 5-aminolevulinate synthase 1 [Homo sapiens]                30   7.6  
gi|4502025 5-aminolevulinate synthase 1 [Homo sapiens]                 30   7.6  
gi|14589891 cadherin 3, type 1 preproprotein [Homo sapiens]            30   10.0 
gi|25282391 nurim [Homo sapiens]                                       30   10.0 
gi|13994253 Golgi reassembly stacking protein 1 [Homo sapiens]         30   10.0 

>gi|189458812 glucan (1,4-alpha-), branching enzyme 1 [Homo sapiens]
          Length = 702

 Score = 1473 bits (3814), Expect = 0.0
 Identities = 702/702 (100%), Positives = 702/702 (100%)

Query: 1   MAAPMTPAARPEDYEAALNAALADVPELARLLEIDPYLKPYAVDFQRRYKQFSQILKNIG 60
           MAAPMTPAARPEDYEAALNAALADVPELARLLEIDPYLKPYAVDFQRRYKQFSQILKNIG
Sbjct: 1   MAAPMTPAARPEDYEAALNAALADVPELARLLEIDPYLKPYAVDFQRRYKQFSQILKNIG 60

Query: 61  ENEGGIDKFSRGYESFGVHRCADGGLYCKEWAPGAEGVFLTGDFNGWNPFSYPYKKLDYG 120
           ENEGGIDKFSRGYESFGVHRCADGGLYCKEWAPGAEGVFLTGDFNGWNPFSYPYKKLDYG
Sbjct: 61  ENEGGIDKFSRGYESFGVHRCADGGLYCKEWAPGAEGVFLTGDFNGWNPFSYPYKKLDYG 120

Query: 121 KWELYIPPKQNKSVLVPHGSKLKVVITSKSGEILYRISPWAKYVVREGDNVNYDWIHWDP 180
           KWELYIPPKQNKSVLVPHGSKLKVVITSKSGEILYRISPWAKYVVREGDNVNYDWIHWDP
Sbjct: 121 KWELYIPPKQNKSVLVPHGSKLKVVITSKSGEILYRISPWAKYVVREGDNVNYDWIHWDP 180

Query: 181 EHSYEFKHSRPKKPRSLRIYESHVGISSHEGKVASYKHFTCNVLPRIKGLGYNCIQLMAI 240
           EHSYEFKHSRPKKPRSLRIYESHVGISSHEGKVASYKHFTCNVLPRIKGLGYNCIQLMAI
Sbjct: 181 EHSYEFKHSRPKKPRSLRIYESHVGISSHEGKVASYKHFTCNVLPRIKGLGYNCIQLMAI 240

Query: 241 MEHAYYASFGYQITSFFAASSRYGTPEELQELVDTAHSMGIIVLLDVVHSHASKNSADGL 300
           MEHAYYASFGYQITSFFAASSRYGTPEELQELVDTAHSMGIIVLLDVVHSHASKNSADGL
Sbjct: 241 MEHAYYASFGYQITSFFAASSRYGTPEELQELVDTAHSMGIIVLLDVVHSHASKNSADGL 300

Query: 301 NMFDGTDSCYFHSGPRGTHDLWDSRLFAYSSWEVLRFLLSNIRWWLEEYRFDGFRFDGVT 360
           NMFDGTDSCYFHSGPRGTHDLWDSRLFAYSSWEVLRFLLSNIRWWLEEYRFDGFRFDGVT
Sbjct: 301 NMFDGTDSCYFHSGPRGTHDLWDSRLFAYSSWEVLRFLLSNIRWWLEEYRFDGFRFDGVT 360

Query: 361 SMLYHHHGVGQGFSGDYSEYFGLQVDEDALTYLMLANHLVHTLCPDSITIAEDVSGMPAL 420
           SMLYHHHGVGQGFSGDYSEYFGLQVDEDALTYLMLANHLVHTLCPDSITIAEDVSGMPAL
Sbjct: 361 SMLYHHHGVGQGFSGDYSEYFGLQVDEDALTYLMLANHLVHTLCPDSITIAEDVSGMPAL 420

Query: 421 CSPISQGGGGFDYRLAMAIPDKWIQLLKEFKDEDWNMGDIVYTLTNRRYLEKCIAYAESH 480
           CSPISQGGGGFDYRLAMAIPDKWIQLLKEFKDEDWNMGDIVYTLTNRRYLEKCIAYAESH
Sbjct: 421 CSPISQGGGGFDYRLAMAIPDKWIQLLKEFKDEDWNMGDIVYTLTNRRYLEKCIAYAESH 480

Query: 481 DQALVGDKSLAFWLMDAEMYTNMSVLTPFTPVIDRGIQLHKMIRLITHGLGGEGYLNFMG 540
           DQALVGDKSLAFWLMDAEMYTNMSVLTPFTPVIDRGIQLHKMIRLITHGLGGEGYLNFMG
Sbjct: 481 DQALVGDKSLAFWLMDAEMYTNMSVLTPFTPVIDRGIQLHKMIRLITHGLGGEGYLNFMG 540

Query: 541 NEFGHPEWLDFPRKGNNESYHYARRQFHLTDDDLLRYKFLNNFDRDMNRLEERYGWLAAP 600
           NEFGHPEWLDFPRKGNNESYHYARRQFHLTDDDLLRYKFLNNFDRDMNRLEERYGWLAAP
Sbjct: 541 NEFGHPEWLDFPRKGNNESYHYARRQFHLTDDDLLRYKFLNNFDRDMNRLEERYGWLAAP 600

Query: 601 QAYVSEKHEGNKIIAFERAGLLFIFNFHPSKSYTDYRVGTALPGKFKIVLDSDAAEYGGH 660
           QAYVSEKHEGNKIIAFERAGLLFIFNFHPSKSYTDYRVGTALPGKFKIVLDSDAAEYGGH
Sbjct: 601 QAYVSEKHEGNKIIAFERAGLLFIFNFHPSKSYTDYRVGTALPGKFKIVLDSDAAEYGGH 660

Query: 661 QRLDHSTDFFSEAFEHNGRPYSLLVYIPSRVALILQNVDLPN 702
           QRLDHSTDFFSEAFEHNGRPYSLLVYIPSRVALILQNVDLPN
Sbjct: 661 QRLDHSTDFFSEAFEHNGRPYSLLVYIPSRVALILQNVDLPN 702


>gi|58386720 oviductal glycoprotein 1 precursor [Homo sapiens]
          Length = 678

 Score = 37.4 bits (85), Expect = 0.048
 Identities = 34/111 (30%), Positives = 47/111 (42%), Gaps = 19/111 (17%)

Query: 303 FDGTDSCYFHSGPRGT--HDLW------DSRLFAYSSWEVL----RFLLS-------NIR 343
           FDG D  + + G RG+  HD W      +  LFA+    +L    R LLS       +I 
Sbjct: 133 FDGLDLFFLYPGLRGSPMHDRWTFLFLIEELLFAFRKEALLTMRPRLLLSAAVSGVPHIV 192

Query: 344 WWLEEYRFDGFRFDGVTSMLYHHHGVGQGFSGDYSEYFGLQVDEDALTYLM 394
               + RF G   D +  + Y  HG  + F+G  S  F L  D  +  Y M
Sbjct: 193 QTSYDVRFLGRLLDFINVLSYDLHGSWERFTGHNSPLFSLPEDPKSSAYAM 243


>gi|187423904 solute carrier family 3, member 1 [Homo sapiens]
          Length = 685

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 26/118 (22%), Positives = 44/118 (37%), Gaps = 14/118 (11%)

Query: 249 FGYQITSFFAASSRYGTPEELQELVDTAHSMGIIVLLDVVHSHASKNSADGLNMFDGTDS 308
           F Y +  F      +GT E+ + LV   H  G+ +++D + +H S               
Sbjct: 173 FRYGVEDFREVDPIFGTMEDFENLVAAIHDKGLKLIIDFIPNHTSDK------------H 220

Query: 309 CYFHSGPRGTHDLWDSRLFAYSSWEVLRFLLSNIRWWLEEYRFDGFRFDGVTSMLYHH 366
            +F      T    D  ++   + E  + +  N   WL  Y    + FD V +  Y H
Sbjct: 221 IWFQLSRTRTGKYTDYYIWHDCTHENGKTIPPNN--WLSVYGNSSWHFDEVRNQCYFH 276


>gi|41281583 Histidine acid phosphatase domain containing 1 [Homo
           sapiens]
          Length = 1222

 Score = 30.8 bits (68), Expect = 4.5
 Identities = 23/99 (23%), Positives = 49/99 (49%), Gaps = 9/99 (9%)

Query: 453 EDWNMGDIVYTLTNRRY-LEKCIAYAESHDQALVGDKSLAFWLMD-AEMYTNM---SVLT 507
           E+W + D + +  ++ + L+K +AYA+  +  ++ D ++ + + D  E+Y+ +    +L 
Sbjct: 89  ENWPLCDCLISFHSKGFPLDKAVAYAKLRNPFVINDLNMQYLIQDRREVYSILQAEGILL 148

Query: 508 PFTPVIDRGIQLHKMIRLITHGLGGEGYLNFMGNEFGHP 546
           P   +++R     K   LI     GE ++   G  F  P
Sbjct: 149 PRYAILNRDPNNPKECNLIE----GEDHVEVNGEVFQKP 183


>gi|40316939 5-aminolevulinate synthase 1 [Homo sapiens]
          Length = 640

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 15/39 (38%), Positives = 20/39 (51%)

Query: 252 QITSFFAASSRYGTPEELQELVDTAHSMGIIVLLDVVHS 290
           +I +F    S  G    L+EL D AH  G I  +D VH+
Sbjct: 377 KIVAFETVHSMDGAVCPLEELCDVAHEFGAITFVDEVHA 415


>gi|4502025 5-aminolevulinate synthase 1 [Homo sapiens]
          Length = 640

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 15/39 (38%), Positives = 20/39 (51%)

Query: 252 QITSFFAASSRYGTPEELQELVDTAHSMGIIVLLDVVHS 290
           +I +F    S  G    L+EL D AH  G I  +D VH+
Sbjct: 377 KIVAFETVHSMDGAVCPLEELCDVAHEFGAITFVDEVHA 415


>gi|14589891 cadherin 3, type 1 preproprotein [Homo sapiens]
          Length = 829

 Score = 29.6 bits (65), Expect = 10.0
 Identities = 23/108 (21%), Positives = 43/108 (39%), Gaps = 5/108 (4%)

Query: 47  RRYKQFSQILKNIGENEGGIDKFSRGYESFGVHRCADGGLYCKEWAPGA----EGVFLTG 102
           RR+K+   ++  I   E G   F +       ++  D  ++     PGA    EGVF   
Sbjct: 103 RRHKR-DWVVAPISVPENGKGPFPQRLNQLKSNKDRDTKIFYSITGPGADSPPEGVFAVE 161

Query: 103 DFNGWNPFSYPYKKLDYGKWELYIPPKQNKSVLVPHGSKLKVVITSKS 150
              GW   + P  + +  K+EL+          V     + +++T ++
Sbjct: 162 KETGWLLLNKPLDREEIAKYELFGHAVSENGASVEDPMNISIIVTDQN 209


>gi|25282391 nurim [Homo sapiens]
          Length = 262

 Score = 29.6 bits (65), Expect = 10.0
 Identities = 24/105 (22%), Positives = 46/105 (43%), Gaps = 17/105 (16%)

Query: 310 YFHSGPRGTHDLWDSRLFAYSSWEVLRFLLSNIRWWLEEYR----FDGFRFDGVTSMLYH 365
           Y+   P+G   LW++R   +++W  L   + ++  WL  +     FD     G+  + YH
Sbjct: 115 YWEPIPKGPV-LWEARAEPWATWVPLLCFVLHVISWLLIFSILLVFDYAELMGLKQVYYH 173

Query: 366 HHGVGQGFSGDYSEYFGLQVDEDALTYLMLANHLVHTLCPDSITI 410
             G+G+  +              +   L L +HL H +C + +T+
Sbjct: 174 VLGLGEPLA------------LKSPRALRLFSHLRHPVCVELLTV 206


>gi|13994253 Golgi reassembly stacking protein 1 [Homo sapiens]
          Length = 440

 Score = 29.6 bits (65), Expect = 10.0
 Identities = 13/29 (44%), Positives = 16/29 (55%)

Query: 658 GGHQRLDHSTDFFSEAFEHNGRPYSLLVY 686
           G  Q L  S DFF+    H G+P  L+VY
Sbjct: 138 GSDQILQESEDFFTLIESHEGKPLKLMVY 166


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.139    0.441 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,557,710
Number of Sequences: 37866
Number of extensions: 1317804
Number of successful extensions: 2346
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2339
Number of HSP's gapped (non-prelim): 11
length of query: 702
length of database: 18,247,518
effective HSP length: 109
effective length of query: 593
effective length of database: 14,120,124
effective search space: 8373233532
effective search space used: 8373233532
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.