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Search of human proteins with 18777795
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|18777795 serine hydrolase-like 2 [Homo sapiens]
(314 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|18777795 serine hydrolase-like 2 [Homo sapiens] 636 0.0
gi|218777837 abhydrolase domain containing 7 [Homo sapiens] 53 4e-07
gi|27597073 epoxide hydrolase 2, cytoplasmic [Homo sapiens] 49 8e-06
gi|218777840 abhydrolase domain containing 9 [Homo sapiens] 47 2e-05
gi|13376164 abhydrolase domain containing 9 [Homo sapiens] 47 2e-05
gi|189027141 abhydrolase domain containing 6 [Homo sapiens] 47 3e-05
gi|23200008 abhydrolase domain containing 11 isoform 1 [Homo sap... 43 3e-04
gi|23200012 abhydrolase domain containing 11 isoform 2 [Homo sap... 43 3e-04
gi|145611434 abhydrolase domain containing 8 [Homo sapiens] 40 0.003
gi|221316588 biphenyl hydrolase-like [Homo sapiens] 34 0.19
gi|31542303 abhydrolase domain containing 5 [Homo sapiens] 33 0.25
gi|4503583 epoxide hydrolase 1 [Homo sapiens] 29 4.7
gi|209862837 epoxide hydrolase 1 [Homo sapiens] 29 4.7
gi|50658087 abhydrolase domain containing 4 [Homo sapiens] 29 4.7
gi|239747867 PREDICTED: hypothetical protein [Homo sapiens] 29 6.2
gi|157738667 FYVE and coiled-coil domain containing 1 [Homo sapi... 29 6.2
gi|34577114 cytomatrix protein p110 [Homo sapiens] 29 6.2
gi|239735605 leucine rich repeat containing 36 isoform 1 [Homo s... 28 8.1
gi|18640738 ankyrin repeat, SAM and basic leucine zipper domain ... 28 8.1
gi|239735598 leucine rich repeat containing 36 isoform 2 [Homo s... 28 8.1
gi|21493039 A-kinase anchor protein 4 isoform 2 [Homo sapiens] 28 8.1
gi|21493037 A-kinase anchor protein 4 isoform 1 [Homo sapiens] 28 8.1
>gi|18777795 serine hydrolase-like 2 [Homo sapiens]
Length = 314
Score = 636 bits (1640), Expect = 0.0
Identities = 314/314 (100%), Positives = 314/314 (100%)
Query: 1 MSENAAPGLISELKLAVPWGHIAAKAWGSLQGPPVLCLHGWLDNASSFDRLIPLLPQDFY 60
MSENAAPGLISELKLAVPWGHIAAKAWGSLQGPPVLCLHGWLDNASSFDRLIPLLPQDFY
Sbjct: 1 MSENAAPGLISELKLAVPWGHIAAKAWGSLQGPPVLCLHGWLDNASSFDRLIPLLPQDFY 60
Query: 61 YVAMDFGGHGLSSHYSPGVPYYLQTFVSEIRRVVAALKWNRFSILGHSFGGVVGGMFFCT 120
YVAMDFGGHGLSSHYSPGVPYYLQTFVSEIRRVVAALKWNRFSILGHSFGGVVGGMFFCT
Sbjct: 61 YVAMDFGGHGLSSHYSPGVPYYLQTFVSEIRRVVAALKWNRFSILGHSFGGVVGGMFFCT 120
Query: 121 FPEMVDKLILLDTPLFLLESDEMENLLTYKRRAIEHVLQVEASQEPSHVFSLKQLLQRLL 180
FPEMVDKLILLDTPLFLLESDEMENLLTYKRRAIEHVLQVEASQEPSHVFSLKQLLQRLL
Sbjct: 121 FPEMVDKLILLDTPLFLLESDEMENLLTYKRRAIEHVLQVEASQEPSHVFSLKQLLQRLL 180
Query: 181 KSNSHLSEECGELLLQRGTTKVATGLVLNRDQRLAWAENSIDFISRELCAHSIRKLQAHV 240
KSNSHLSEECGELLLQRGTTKVATGLVLNRDQRLAWAENSIDFISRELCAHSIRKLQAHV
Sbjct: 181 KSNSHLSEECGELLLQRGTTKVATGLVLNRDQRLAWAENSIDFISRELCAHSIRKLQAHV 240
Query: 241 LLIKAVHGYFDSRQNYSEKESLSFMIDTMKSTLKEQFQFVEVPGNHCVHMSEPQHVASII 300
LLIKAVHGYFDSRQNYSEKESLSFMIDTMKSTLKEQFQFVEVPGNHCVHMSEPQHVASII
Sbjct: 241 LLIKAVHGYFDSRQNYSEKESLSFMIDTMKSTLKEQFQFVEVPGNHCVHMSEPQHVASII 300
Query: 301 SSFLQCTHMLPAQL 314
SSFLQCTHMLPAQL
Sbjct: 301 SSFLQCTHMLPAQL 314
>gi|218777837 abhydrolase domain containing 7 [Homo sapiens]
Length = 362
Score = 52.8 bits (125), Expect = 4e-07
Identities = 29/109 (26%), Positives = 59/109 (54%)
Query: 26 AWGSLQGPPVLCLHGWLDNASSFDRLIPLLPQDFYYVAMDFGGHGLSSHYSPGVPYYLQT 85
A G P +L LHG+ + S+ + ++ VA+D G+G + Y L
Sbjct: 87 AAGERGKPLMLLLHGFPEFWYSWRYQLREFKSEYRVVALDLRGYGETDAPIHRQNYKLDC 146
Query: 86 FVSEIRRVVAALKWNRFSILGHSFGGVVGGMFFCTFPEMVDKLILLDTP 134
+++I+ ++ +L +++ ++GH +GG++ + +PEMV KLI+++ P
Sbjct: 147 LITDIKDILDSLGYSKCVLIGHDWGGMIAWLIAICYPEMVMKLIVINFP 195
>gi|27597073 epoxide hydrolase 2, cytoplasmic [Homo sapiens]
Length = 555
Score = 48.5 bits (114), Expect = 8e-06
Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 7/161 (4%)
Query: 32 GPPVLCLHGWLDNASSFDRLIPLLPQDFYYV-AMDFGGHGLSSHYSPGVPYYLQTFVSEI 90
GP V HG+ ++ S+ IP L Q Y V AMD G+G SS Y ++ E+
Sbjct: 258 GPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEM 317
Query: 91 RRVVAALKWNRFSILGHSFGGVVGGMFFCTFPEMVDKLILLDTPLFLLESDEMENLLTYK 150
+ L ++ +GH +GG++ +PE V + L+TP F+ + M L + K
Sbjct: 318 VTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTP-FIPANPNMSPLESIK 376
Query: 151 RRAI-EHVLQVEASQEPSHV-FSLKQLLQRLLKSNSHLSEE 189
+ ++ L QEP L+Q L R KS S+E
Sbjct: 377 ANPVFDYQLYF---QEPGVAEAELEQNLSRTFKSLFRASDE 414
>gi|218777840 abhydrolase domain containing 9 [Homo sapiens]
Length = 360
Score = 47.4 bits (111), Expect = 2e-05
Identities = 33/154 (21%), Positives = 73/154 (47%), Gaps = 1/154 (0%)
Query: 28 GSLQGPPVLCLHGWLDNASSFDRLIPLLPQDFYYVAMDFGGHGLSSHYSPGVPYYLQTFV 87
G GP +L LHG+ +N S+ + F+ VA+D G+G S Y + +
Sbjct: 93 GRGNGPLMLFLHGFPENWFSWRYQLREFQSRFHVVAVDLRGYGPSDAPRDVDCYTIDLLL 152
Query: 88 SEIRRVVAALKWNRFSILGHSFGGVVGGMFFCTFPEMVDKLILLD-TPLFLLESDEMENL 146
+I+ V+ L +++ ++ H +G ++ F +P +V++++++ P+ + + + ++
Sbjct: 153 VDIKDVILGLGYSKCILVAHDWGALLAWHFSIYYPSLVERMVVVSGAPMSVYQDYSLHHI 212
Query: 147 LTYKRRAIEHVLQVEASQEPSHVFSLKQLLQRLL 180
+ R + Q+ E S Q+L+ L
Sbjct: 213 SQFFRSHYMFLFQLPWLPEKLLSMSDFQILKTTL 246
>gi|13376164 abhydrolase domain containing 9 [Homo sapiens]
Length = 360
Score = 47.4 bits (111), Expect = 2e-05
Identities = 33/154 (21%), Positives = 73/154 (47%), Gaps = 1/154 (0%)
Query: 28 GSLQGPPVLCLHGWLDNASSFDRLIPLLPQDFYYVAMDFGGHGLSSHYSPGVPYYLQTFV 87
G GP +L LHG+ +N S+ + F+ VA+D G+G S Y + +
Sbjct: 93 GRGNGPLMLFLHGFPENWFSWRYQLREFQSRFHVVAVDLRGYGPSDAPRDVDCYTIDLLL 152
Query: 88 SEIRRVVAALKWNRFSILGHSFGGVVGGMFFCTFPEMVDKLILLD-TPLFLLESDEMENL 146
+I+ V+ L +++ ++ H +G ++ F +P +V++++++ P+ + + + ++
Sbjct: 153 VDIKDVILGLGYSKCILVAHDWGALLAWHFSIYYPSLVERMVVVSGAPMSVYQDYSLHHI 212
Query: 147 LTYKRRAIEHVLQVEASQEPSHVFSLKQLLQRLL 180
+ R + Q+ E S Q+L+ L
Sbjct: 213 SQFFRSHYMFLFQLPWLPEKLLSMSDFQILKTTL 246
>gi|189027141 abhydrolase domain containing 6 [Homo sapiens]
Length = 337
Score = 46.6 bits (109), Expect = 3e-05
Identities = 55/232 (23%), Positives = 101/232 (43%), Gaps = 25/232 (10%)
Query: 33 PPVLCLHGWLDNASSFDRLIPLLPQDFYYVAMDFGGHGLSSHYSPGVPYYLQTFVSEIRR 92
P +L LHG+ + + ++ LP++ + V +D GH ++ S + V I +
Sbjct: 72 PSILMLHGFSAHKDMWLSVVKFLPKNLHLVCVDMPGHEGTTRSSLD-DLSIDGQVKRIHQ 130
Query: 93 VVAALKWNR--FSILGHSFGGVVGGMFFCTFPEMVDKLILLDTPLFLLESDEMENLLTYK 150
V LK N+ F ++G S GG V G++ +P V L L+ P L S + + + K
Sbjct: 131 FVECLKLNKKPFHLVGTSMGGQVAGVYAAYYPSDVSSLCLV-CPAGLQYSTDNQFVQRLK 189
Query: 151 R----RAIEHVLQVEAS-QEPSHVFSL---------KQLLQRLLKSNSHLSEECGELLLQ 196
A+E + + ++ +E S + L +Q+LQ L+ + +L L+
Sbjct: 190 ELQGSAAVEKIPLIPSTPEEMSEMLQLCSYVRFKVPQQILQGLVDVRIPHNNFYRKLFLE 249
Query: 197 RGTTKVATGLVLNRDQ-----RLAWAENS--IDFISRELCAHSIRKLQAHVL 241
+ K L N D+ ++ W + +D ++ A SI Q +L
Sbjct: 250 IVSEKSRYSLHQNMDKIKVPTQIIWGKQDQVLDVSGADMLAKSIANCQVELL 301
>gi|23200008 abhydrolase domain containing 11 isoform 1 [Homo
sapiens]
Length = 315
Score = 43.1 bits (100), Expect = 3e-04
Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 33 PPVLCLHGWLDNASSFDRLIPLLPQDF--YYVAMDFGGHGLSSHYSPGVPYYLQTFVSEI 90
P V+ LHG + ++F+ + +L Q + +D HG S H SP + Y + + ++
Sbjct: 67 PAVVFLHGLFGSKTNFNSIAKILAQQTGRRVLTVDARNHGDSPH-SPDMSYEIMS--QDL 123
Query: 91 RRVVAALKWNRFSILGHSFGGVVGGMFFCTFPEMVDKLILLDTPLFLLESDEMENLLTY 149
+ ++ L ++GHS GG + PE+V++LI +D + +ES + + TY
Sbjct: 124 QDLLPQLGLVPCVVVGHSMGGKTAMLLALQRPELVERLIAVD--ISPVESTGVSHFATY 180
>gi|23200012 abhydrolase domain containing 11 isoform 2 [Homo
sapiens]
Length = 308
Score = 43.1 bits (100), Expect = 3e-04
Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 33 PPVLCLHGWLDNASSFDRLIPLLPQDF--YYVAMDFGGHGLSSHYSPGVPYYLQTFVSEI 90
P V+ LHG + ++F+ + +L Q + +D HG S H SP + Y + + ++
Sbjct: 60 PAVVFLHGLFGSKTNFNSIAKILAQQTGRRVLTVDARNHGDSPH-SPDMSYEIMS--QDL 116
Query: 91 RRVVAALKWNRFSILGHSFGGVVGGMFFCTFPEMVDKLILLDTPLFLLESDEMENLLTY 149
+ ++ L ++GHS GG + PE+V++LI +D + +ES + + TY
Sbjct: 117 QDLLPQLGLVPCVVVGHSMGGKTAMLLALQRPELVERLIAVD--ISPVESTGVSHFATY 173
>gi|145611434 abhydrolase domain containing 8 [Homo sapiens]
Length = 439
Score = 40.0 bits (92), Expect = 0.003
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 16/97 (16%)
Query: 41 WLDNASSFDRLIPLLPQDFYYVAMDFGGHGLSSHYSPGVPYYLQTFVSEIRRVVAALKWN 100
W + F RL + VA D GHG SS Y ++R +
Sbjct: 191 WKEQLDFFVRL------GYEVVAPDLAGHGASSAPQVAAAYTFYALAEDMRAIFKRYAKK 244
Query: 101 RFSILGHSFGGVVGGMFFCTF-----PEMVDKLILLD 132
R ++GHS+ G+ FCTF P++V K+I+++
Sbjct: 245 RNVLIGHSY-----GVSFCTFLAHEYPDLVHKVIMIN 276
>gi|221316588 biphenyl hydrolase-like [Homo sapiens]
Length = 291
Score = 33.9 bits (76), Expect = 0.19
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 59 FYYVAMDFGGHGLSSHYSPGVPY-YLQTFVSEIRRVVAALKWNRFSILGHSFGGVVGGMF 117
F VA D G+G S P + + + ++ ALK+ + S+LG S GG+ +
Sbjct: 89 FTVVAWDPRGYGHSRPPDRDFPADFFERDAKDAVDLMKALKFKKVSLLGWSDGGITALIA 148
Query: 118 FCTFPEMVDKLILLDTPLFLLESDEM 143
+P + K+++ ++ + D M
Sbjct: 149 AAKYPSYIHKMVIWGANAYVTDEDSM 174
>gi|31542303 abhydrolase domain containing 5 [Homo sapiens]
Length = 349
Score = 33.5 bits (75), Expect = 0.25
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 63 AMDFGGHGLSSH--YSPGVPYYLQTFVSEIRRVVAALKWNRFSILGHSFGGVVGGMFFCT 120
A D G G SS + FV I AL ++ +LGH+ GG + +
Sbjct: 106 AFDLLGFGRSSRPRFDSDAEEVENQFVESIEEWRCALGLDKMILLGHNLGGFLAAAYSLK 165
Query: 121 FPEMVDKLILLD 132
+P V+ LIL++
Sbjct: 166 YPSRVNHLILVE 177
>gi|4503583 epoxide hydrolase 1 [Homo sapiens]
Length = 455
Score = 29.3 bits (64), Expect = 4.7
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 13/54 (24%)
Query: 34 PVLCLHGWLDNASSFDRLIPLLPQDFYYVAMDFGGHGLSSHY-----SPGVPYY 82
P+L +HGW + F ++IPLL D HGLS + P +P Y
Sbjct: 143 PLLMVHGWPGSFYEFYKIIPLL--------TDPKNHGLSDEHVFEVICPSIPGY 188
>gi|209862837 epoxide hydrolase 1 [Homo sapiens]
Length = 455
Score = 29.3 bits (64), Expect = 4.7
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 13/54 (24%)
Query: 34 PVLCLHGWLDNASSFDRLIPLLPQDFYYVAMDFGGHGLSSHY-----SPGVPYY 82
P+L +HGW + F ++IPLL D HGLS + P +P Y
Sbjct: 143 PLLMVHGWPGSFYEFYKIIPLL--------TDPKNHGLSDEHVFEVICPSIPGY 188
>gi|50658087 abhydrolase domain containing 4 [Homo sapiens]
Length = 342
Score = 29.3 bits (64), Expect = 4.7
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 104 ILGHSFGGVVGGMFFCTFPEMVDKLILLD 132
+LGHS GG + + +P+ V LIL+D
Sbjct: 142 LLGHSLGGFLATSYSIKYPDRVKHLILVD 170
>gi|239747867 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 28.9 bits (63), Expect = 6.2
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Query: 15 LAVPWGHIAAKAWGSLQGP-PVLCLHG 40
L + W H+ + WG +Q P P LHG
Sbjct: 333 LGLLWAHLEHETWGQVQAPGPTAALHG 359
>gi|157738667 FYVE and coiled-coil domain containing 1 [Homo
sapiens]
Length = 1478
Score = 28.9 bits (63), Expect = 6.2
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 139 ESDEMENLLTYKRRAIEHVLQ---VEASQEPSHVFSLKQLLQRLLKSNSHLSEECGEL 193
+ E + LL + R++ LQ + +Q HV L++ ++L++ HLS++ G L
Sbjct: 496 QQQEEKELLEQEVRSLTRQLQFLETQLAQVSQHVSDLEEQKKQLIQDKDHLSQQVGML 553
>gi|34577114 cytomatrix protein p110 [Homo sapiens]
Length = 957
Score = 28.9 bits (63), Expect = 6.2
Identities = 34/133 (25%), Positives = 54/133 (40%), Gaps = 20/133 (15%)
Query: 161 EASQEPSHVFSLKQLLQRLLKSNSHLSEEC---GELLLQRGTTKVATGLVLNRDQRLAWA 217
EA + SH L+ +L + K N HL EE +L + TK ++ +D ++A
Sbjct: 334 EAESQVSH---LEVILDQKEKENIHLREELHRRSQLQPEPAKTKALQTVIEMKDTKIASL 390
Query: 218 ENSIDFISRE---LCAHSIRKLQAHVLLIKAVHGYFDS-----------RQNYSEKESLS 263
E +I + E L A+ + + IK + Y +Q S+KES
Sbjct: 391 ERNIRDLEDEIQMLKANGVLNTEDREEEIKQIEVYKSHSKFMKTKIDQLKQELSKKESEL 450
Query: 264 FMIDTMKSTLKEQ 276
+ T TL Q
Sbjct: 451 LALQTKLETLSNQ 463
>gi|239735605 leucine rich repeat containing 36 isoform 1 [Homo
sapiens]
Length = 754
Score = 28.5 bits (62), Expect = 8.1
Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 11/135 (8%)
Query: 62 VAMDFGG-HGLSSHYSPGVPYYLQTFVSEIRRVVAALK--WNRFSILGHSFGGVVGGMFF 118
++ D G HGL+ ++SP + + +R+++ + WN L ++ F
Sbjct: 500 LSSDLGSLHGLAGNHSPPISARTPHVATVLRQLLELVDKHWNGSGSL------LLNKKFL 553
Query: 119 CTFPEMVDKLILLDTPLFLLESDEMENLLTYKRRAIEHVLQVEASQEPSHVFSLKQLLQR 178
+++ L++ S + + + RR +E L+ A P+ + SLKQ L R
Sbjct: 554 GPARDLLLSLVVPAPSQPRCCSHPEDTMKAFCRRELE--LKEAAQLVPNDMESLKQKLVR 611
Query: 179 LLKSNSHLSEECGEL 193
+L+ N LSE+ +L
Sbjct: 612 VLEENLILSEKIQQL 626
>gi|18640738 ankyrin repeat, SAM and basic leucine zipper domain
containing 1 [Homo sapiens]
Length = 475
Score = 28.5 bits (62), Expect = 8.1
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 21/116 (18%)
Query: 137 LLESDEMENLLTYKRRAIEHVLQVEASQEPSHVFSLKQLLQRLLKSNSHLSEECGELLLQ 196
+ D+ + L K +E + E S+E S + L LLK L+++CG L+
Sbjct: 318 ITSKDQQKILAALKELQVEEIQFGELSEETKLEISGDEFLNFLLK----LNKQCGHLI-- 371
Query: 197 RGTTKVATGLVLNRDQ-RLAWAE------------NSIDFISRELC--AHSIRKLQ 237
V T L +N + L WA N+++ +S ++C I+KLQ
Sbjct: 372 TAVQNVITELPVNSQKITLEWASPQNFTSVCEELVNNVEDLSEKVCKLKDLIQKLQ 427
>gi|239735598 leucine rich repeat containing 36 isoform 2 [Homo
sapiens]
Length = 633
Score = 28.5 bits (62), Expect = 8.1
Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 11/135 (8%)
Query: 62 VAMDFGG-HGLSSHYSPGVPYYLQTFVSEIRRVVAALK--WNRFSILGHSFGGVVGGMFF 118
++ D G HGL+ ++SP + + +R+++ + WN L ++ F
Sbjct: 379 LSSDLGSLHGLAGNHSPPISARTPHVATVLRQLLELVDKHWNGSGSL------LLNKKFL 432
Query: 119 CTFPEMVDKLILLDTPLFLLESDEMENLLTYKRRAIEHVLQVEASQEPSHVFSLKQLLQR 178
+++ L++ S + + + RR +E L+ A P+ + SLKQ L R
Sbjct: 433 GPARDLLLSLVVPAPSQPRCCSHPEDTMKAFCRRELE--LKEAAQLVPNDMESLKQKLVR 490
Query: 179 LLKSNSHLSEECGEL 193
+L+ N LSE+ +L
Sbjct: 491 VLEENLILSEKIQQL 505
>gi|21493039 A-kinase anchor protein 4 isoform 2 [Homo sapiens]
Length = 845
Score = 28.5 bits (62), Expect = 8.1
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 10/64 (15%)
Query: 187 SEECGELLLQRGTT----------KVATGLVLNRDQRLAWAENSIDFISRELCAHSIRKL 236
+E+ GE +L+ G T KVAT N+D++ S D ++++L +++ +
Sbjct: 484 AEKVGEHILKEGLTIWNQKQGNSCKVATKACSNKDEKGEKINASTDSLAKDLIVSALKLI 543
Query: 237 QAHV 240
Q H+
Sbjct: 544 QYHL 547
>gi|21493037 A-kinase anchor protein 4 isoform 1 [Homo sapiens]
Length = 854
Score = 28.5 bits (62), Expect = 8.1
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 10/64 (15%)
Query: 187 SEECGELLLQRGTT----------KVATGLVLNRDQRLAWAENSIDFISRELCAHSIRKL 236
+E+ GE +L+ G T KVAT N+D++ S D ++++L +++ +
Sbjct: 493 AEKVGEHILKEGLTIWNQKQGNSCKVATKACSNKDEKGEKINASTDSLAKDLIVSALKLI 552
Query: 237 QAHV 240
Q H+
Sbjct: 553 QYHL 556
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.136 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,869,064
Number of Sequences: 37866
Number of extensions: 489094
Number of successful extensions: 1153
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1141
Number of HSP's gapped (non-prelim): 23
length of query: 314
length of database: 18,247,518
effective HSP length: 102
effective length of query: 212
effective length of database: 14,385,186
effective search space: 3049659432
effective search space used: 3049659432
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.