Guide to the Human Genome
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Name: GINS3 Sequence: fasta or formatted (255aa) NCBI GI: 187169264
Description:

GINS complex subunit 3 isoform a

Referenced in:

Replication Proteins

Other entries for this name:
alt prot [138aa] GINS complex subunit 3 isoform c
alt prot [216aa] GINS complex subunit 3 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         19           2
 C cysteine            0.8          2           1
 D aspartate           5.5         14           2
 E glutamate           7.5         19           2
 F phenylalanine       5.9         15           2
 G glycine             6.7         17           1
 H histidine           1.6          4           1
 I isoleucine          3.5          9           1
 K lysine              4.3         11           2
 L leucine            12.5         32           2
 M methionine          3.1          8           1
 N asparagine          3.9         10           1
 P proline             5.9         15           2
 Q glutamine           5.9         15           1
 R arginine            5.5         14           2
 S serine              7.5         19           2
 T threonine           4.3         11           1
 V valine              4.3         11           2
 W tryptophan          2.0          5           1
 Y tyrosine            2.0          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   GINS complex subunit 3 isoform a 
GINS3                 0.797   GINS complex subunit 3 isoform b 
GINS3                 0.274   GINS complex subunit 3 isoform c 
MDN1                  0.014   MDN1, midasin homolog 
RAD51L1               0.012   RAD51-like 1 isoform 3 
KIAA1012              0.010   hypothetical protein LOC22878 
MYOF                  0.008   myoferlin isoform b 
MYOF                  0.008   myoferlin isoform a 
MAN2A2                0.008   mannosidase, alpha, class 2A, member 2 
BIRC6                 0.006   baculoviral IAP repeat-containing 6 
ZWILCH                0.006   Zwilch 
NXNL2                 0.006   nucleoredoxin-like 2 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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