Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 17402865
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|17402865 thiosulfate sulfurtransferase [Homo sapiens]
(297 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|17402865 thiosulfate sulfurtransferase [Homo sapiens] 613 e-176
gi|61835204 mercaptopyruvate sulfurtransferase isoform 2 [Homo s... 377 e-105
gi|194473681 mercaptopyruvate sulfurtransferase isoform 2 [Homo ... 377 e-105
gi|194473668 mercaptopyruvate sulfurtransferase isoform 1 [Homo ... 377 e-105
gi|42764687 dual specificity phosphatase 6 isoform b [Homo sapiens] 29 4.4
gi|42764683 dual specificity phosphatase 6 isoform a [Homo sapiens] 29 4.4
gi|14249552 disrupted in renal carcinoma 2 [Homo sapiens] 29 5.7
gi|4505461 ectodermal-neural cortex (with BTB-like domain) [Homo... 28 7.4
gi|171906553 zinc finger with KRAB and SCAN domains 3 [Homo sapi... 28 9.7
gi|21361159 Wilms' tumour 1-associating protein isoform 1 [Homo ... 28 9.7
>gi|17402865 thiosulfate sulfurtransferase [Homo sapiens]
Length = 297
Score = 613 bits (1582), Expect = e-176
Identities = 297/297 (100%), Positives = 297/297 (100%)
Query: 1 MVHQVLYRALVSTKWLAESIRTGKLGPGLRVLDASWYSPGTREARKEYLERHVPGASFFD 60
MVHQVLYRALVSTKWLAESIRTGKLGPGLRVLDASWYSPGTREARKEYLERHVPGASFFD
Sbjct: 1 MVHQVLYRALVSTKWLAESIRTGKLGPGLRVLDASWYSPGTREARKEYLERHVPGASFFD 60
Query: 61 IEECRDTASPYEMMLPSEAGFAEYVGRLGISNHTHVVVYDGEHLGSFYAPRVWWMFRVFG 120
IEECRDTASPYEMMLPSEAGFAEYVGRLGISNHTHVVVYDGEHLGSFYAPRVWWMFRVFG
Sbjct: 61 IEECRDTASPYEMMLPSEAGFAEYVGRLGISNHTHVVVYDGEHLGSFYAPRVWWMFRVFG 120
Query: 121 HRTVSVLNGGFRNWLKEGHPVTSEPSRPEPAVFKATLDRSLLKTYEQVLENLESKRFQLV 180
HRTVSVLNGGFRNWLKEGHPVTSEPSRPEPAVFKATLDRSLLKTYEQVLENLESKRFQLV
Sbjct: 121 HRTVSVLNGGFRNWLKEGHPVTSEPSRPEPAVFKATLDRSLLKTYEQVLENLESKRFQLV 180
Query: 181 DSRSQGRFLGTEPEPDAVGLDSGHIRGAVNMPFMDFLTEDGFEKGPEELRALFQTKKVDL 240
DSRSQGRFLGTEPEPDAVGLDSGHIRGAVNMPFMDFLTEDGFEKGPEELRALFQTKKVDL
Sbjct: 181 DSRSQGRFLGTEPEPDAVGLDSGHIRGAVNMPFMDFLTEDGFEKGPEELRALFQTKKVDL 240
Query: 241 SQPLIATCRKGVTACHVALAAYLCGKPDVAVYDGSWSEWFRRAPPESRVSQGKSEKA 297
SQPLIATCRKGVTACHVALAAYLCGKPDVAVYDGSWSEWFRRAPPESRVSQGKSEKA
Sbjct: 241 SQPLIATCRKGVTACHVALAAYLCGKPDVAVYDGSWSEWFRRAPPESRVSQGKSEKA 297
>gi|61835204 mercaptopyruvate sulfurtransferase isoform 2 [Homo
sapiens]
Length = 297
Score = 377 bits (969), Expect = e-105
Identities = 176/296 (59%), Positives = 224/296 (75%), Gaps = 2/296 (0%)
Query: 1 MVHQVLYRALVSTKWLAESIRTGKLGPGLRVLDASWYSPGT-REARKEYLERHVPGASFF 59
M L RALVS +W+AE++R + G L++LDASWY P R+AR+E+ ERH+PGA+FF
Sbjct: 1 MASPQLCRALVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFF 60
Query: 60 DIEECRDTASPYEMMLPSEAGFAEYVGRLGISNHTHVVVYDGEHLGSFYAPRVWWMFRVF 119
DI++C D SPY+ MLP FAEY GRLG+ THVV+YD G + APRVWWMFR F
Sbjct: 61 DIDQCSDRTSPYDHMLPGAEHFAEYAGRLGVGAATHVVIYDASDQGLYSAPRVWWMFRAF 120
Query: 120 GHRTVSVLNGGFRNWLKEGHPVTSEPSRPEPAVFKATLDRSLLKTYEQVLENLESKRFQL 179
GH VS+L+GG R+WL++ P++S S+P PA F+A LD + +KTYE + ENLES+RFQ+
Sbjct: 121 GHHAVSLLDGGLRHWLRQNLPLSSGKSQPAPAEFRAQLDPAFIKTYEDIKENLESRRFQV 180
Query: 180 VDSRSQGRFLGTEPEPDAVGLDSGHIRGAVNMPFMDFLTEDGFEKGPEELRALFQTKKVD 239
VDSR+ GRF GTEPEP G++ GHI G VN+PF DFL+++G EK PEE+R LFQ KKVD
Sbjct: 181 VDSRATGRFRGTEPEP-RDGIEPGHIPGTVNIPFTDFLSQEGLEKSPEEIRHLFQEKKVD 239
Query: 240 LSQPLIATCRKGVTACHVALAAYLCGKPDVAVYDGSWSEWFRRAPPESRVSQGKSE 295
LS+PL+ATC GVTACHVAL AYLCGKPDV +YDGSW EW+ RA PE +S+G+ +
Sbjct: 240 LSKPLVATCGSGVTACHVALGAYLCGKPDVPIYDGSWVEWYMRARPEDVISEGRGK 295
>gi|194473681 mercaptopyruvate sulfurtransferase isoform 2 [Homo
sapiens]
Length = 297
Score = 377 bits (969), Expect = e-105
Identities = 176/296 (59%), Positives = 224/296 (75%), Gaps = 2/296 (0%)
Query: 1 MVHQVLYRALVSTKWLAESIRTGKLGPGLRVLDASWYSPGT-REARKEYLERHVPGASFF 59
M L RALVS +W+AE++R + G L++LDASWY P R+AR+E+ ERH+PGA+FF
Sbjct: 1 MASPQLCRALVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFF 60
Query: 60 DIEECRDTASPYEMMLPSEAGFAEYVGRLGISNHTHVVVYDGEHLGSFYAPRVWWMFRVF 119
DI++C D SPY+ MLP FAEY GRLG+ THVV+YD G + APRVWWMFR F
Sbjct: 61 DIDQCSDRTSPYDHMLPGAEHFAEYAGRLGVGAATHVVIYDASDQGLYSAPRVWWMFRAF 120
Query: 120 GHRTVSVLNGGFRNWLKEGHPVTSEPSRPEPAVFKATLDRSLLKTYEQVLENLESKRFQL 179
GH VS+L+GG R+WL++ P++S S+P PA F+A LD + +KTYE + ENLES+RFQ+
Sbjct: 121 GHHAVSLLDGGLRHWLRQNLPLSSGKSQPAPAEFRAQLDPAFIKTYEDIKENLESRRFQV 180
Query: 180 VDSRSQGRFLGTEPEPDAVGLDSGHIRGAVNMPFMDFLTEDGFEKGPEELRALFQTKKVD 239
VDSR+ GRF GTEPEP G++ GHI G VN+PF DFL+++G EK PEE+R LFQ KKVD
Sbjct: 181 VDSRATGRFRGTEPEP-RDGIEPGHIPGTVNIPFTDFLSQEGLEKSPEEIRHLFQEKKVD 239
Query: 240 LSQPLIATCRKGVTACHVALAAYLCGKPDVAVYDGSWSEWFRRAPPESRVSQGKSE 295
LS+PL+ATC GVTACHVAL AYLCGKPDV +YDGSW EW+ RA PE +S+G+ +
Sbjct: 240 LSKPLVATCGSGVTACHVALGAYLCGKPDVPIYDGSWVEWYMRARPEDVISEGRGK 295
>gi|194473668 mercaptopyruvate sulfurtransferase isoform 1 [Homo
sapiens]
Length = 317
Score = 377 bits (969), Expect = e-105
Identities = 176/296 (59%), Positives = 224/296 (75%), Gaps = 2/296 (0%)
Query: 1 MVHQVLYRALVSTKWLAESIRTGKLGPGLRVLDASWYSPGT-REARKEYLERHVPGASFF 59
M L RALVS +W+AE++R + G L++LDASWY P R+AR+E+ ERH+PGA+FF
Sbjct: 21 MASPQLCRALVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFF 80
Query: 60 DIEECRDTASPYEMMLPSEAGFAEYVGRLGISNHTHVVVYDGEHLGSFYAPRVWWMFRVF 119
DI++C D SPY+ MLP FAEY GRLG+ THVV+YD G + APRVWWMFR F
Sbjct: 81 DIDQCSDRTSPYDHMLPGAEHFAEYAGRLGVGAATHVVIYDASDQGLYSAPRVWWMFRAF 140
Query: 120 GHRTVSVLNGGFRNWLKEGHPVTSEPSRPEPAVFKATLDRSLLKTYEQVLENLESKRFQL 179
GH VS+L+GG R+WL++ P++S S+P PA F+A LD + +KTYE + ENLES+RFQ+
Sbjct: 141 GHHAVSLLDGGLRHWLRQNLPLSSGKSQPAPAEFRAQLDPAFIKTYEDIKENLESRRFQV 200
Query: 180 VDSRSQGRFLGTEPEPDAVGLDSGHIRGAVNMPFMDFLTEDGFEKGPEELRALFQTKKVD 239
VDSR+ GRF GTEPEP G++ GHI G VN+PF DFL+++G EK PEE+R LFQ KKVD
Sbjct: 201 VDSRATGRFRGTEPEP-RDGIEPGHIPGTVNIPFTDFLSQEGLEKSPEEIRHLFQEKKVD 259
Query: 240 LSQPLIATCRKGVTACHVALAAYLCGKPDVAVYDGSWSEWFRRAPPESRVSQGKSE 295
LS+PL+ATC GVTACHVAL AYLCGKPDV +YDGSW EW+ RA PE +S+G+ +
Sbjct: 260 LSKPLVATCGSGVTACHVALGAYLCGKPDVPIYDGSWVEWYMRARPEDVISEGRGK 315
>gi|42764687 dual specificity phosphatase 6 isoform b [Homo sapiens]
Length = 235
Score = 29.3 bits (64), Expect = 4.4
Identities = 34/141 (24%), Positives = 54/141 (38%), Gaps = 33/141 (23%)
Query: 147 RPEPAVFKATLDRSLLKTYEQVLENLESKRFQLVDSRSQGRFLGTEPEPDAVGLDSGHIR 206
RP P + + +++ EQ+ L ++R L+D R Q + +S HI
Sbjct: 6 RPVPFASEMAISKTVAWLNEQL--ELGNERLLLMDCRPQELY------------ESSHIE 51
Query: 207 GAVNMPFMDFLTEDGFEKGPEELRALFQTKKVDLSQPLIATCRKGVTACHVALAAYLCGK 266
A+N+ + +KG +RALF T+ D + CG
Sbjct: 52 SAINVAIPGIMLRR-LQKGNLPVRALF-TRGEDRDR-----------------FTRRCGT 92
Query: 267 PDVAVYDGSWSEWFRRAPPES 287
V +YD S S+W ES
Sbjct: 93 DTVVLYDESSSDWNENTGGES 113
>gi|42764683 dual specificity phosphatase 6 isoform a [Homo sapiens]
Length = 381
Score = 29.3 bits (64), Expect = 4.4
Identities = 34/141 (24%), Positives = 54/141 (38%), Gaps = 33/141 (23%)
Query: 147 RPEPAVFKATLDRSLLKTYEQVLENLESKRFQLVDSRSQGRFLGTEPEPDAVGLDSGHIR 206
RP P + + +++ EQ+ L ++R L+D R Q + +S HI
Sbjct: 6 RPVPFASEMAISKTVAWLNEQL--ELGNERLLLMDCRPQELY------------ESSHIE 51
Query: 207 GAVNMPFMDFLTEDGFEKGPEELRALFQTKKVDLSQPLIATCRKGVTACHVALAAYLCGK 266
A+N+ + +KG +RALF T+ D + CG
Sbjct: 52 SAINVAIPGIMLRR-LQKGNLPVRALF-TRGEDRDR-----------------FTRRCGT 92
Query: 267 PDVAVYDGSWSEWFRRAPPES 287
V +YD S S+W ES
Sbjct: 93 DTVVLYDESSSDWNENTGGES 113
>gi|14249552 disrupted in renal carcinoma 2 [Homo sapiens]
Length = 478
Score = 28.9 bits (63), Expect = 5.7
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Query: 11 VSTKWLAESIRTGKLGPGLRV-LDASWYSPGTREARKEYLERHVPG 55
+ ++W +E R LGPGL L ASW S REA L VPG
Sbjct: 1 MGSRWSSEEERQPLLGPGLGPGLGASWRS---REAAAAALPAAVPG 43
>gi|4505461 ectodermal-neural cortex (with BTB-like domain) [Homo
sapiens]
Length = 589
Score = 28.5 bits (62), Expect = 7.4
Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 14/68 (20%)
Query: 237 KVDLSQPLIATCRKGVTACHVALAAYLCG--------KPDVAVYDGSWSEWFRRAPP-ES 287
K D+ P RK +AC + Y+ G DV VYD EW + AP +
Sbjct: 323 KADIPSP-----RKEFSACAIGCKVYITGGRGSENGVSKDVWVYDTLHEEWSKAAPMLVA 377
Query: 288 RVSQGKSE 295
R G +E
Sbjct: 378 RFGHGSAE 385
>gi|171906553 zinc finger with KRAB and SCAN domains 3 [Homo
sapiens]
Length = 538
Score = 28.1 bits (61), Expect = 9.7
Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 15/90 (16%)
Query: 124 VSVLNGGFRNWLKEGHPVTSEP------------SRPEPAVFKATLDRSLLKTYEQVL-- 169
+++L G ++W++E HP + E P P V + LL +L
Sbjct: 95 LTILPGNLQSWVREQHPESGEEVVVLLEYLERQLDEPAPQVSGVDQGQELLCCKMALLTP 154
Query: 170 -ENLESKRFQLVDSRSQGRFLGTEPEPDAV 198
+S +FQL+ + + +G++P D V
Sbjct: 155 APGSQSSQFQLMKALLKHESVGSQPLQDRV 184
>gi|21361159 Wilms' tumour 1-associating protein isoform 1 [Homo
sapiens]
Length = 396
Score = 28.1 bits (61), Expect = 9.7
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Query: 172 LESKRFQLVDSRSQGRFLGTEPEPDAVGLDSGHIRGAVNMPFMDFL-----TEDGFEKGP 226
L +K ++ + +Q ++L +P L S + A+N+ F+ T+D E+
Sbjct: 80 LATKEQEMQECTTQIQYLKQVQQPSVAQLRSTMVDPAINLFFLKMKGELEQTKDKLEQAQ 139
Query: 227 EELRALFQTKKVDLSQPLIATCR 249
EL A T + L+A CR
Sbjct: 140 NELSAWKFTPDSQTGKKLMAKCR 162
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,616,479
Number of Sequences: 37866
Number of extensions: 568092
Number of successful extensions: 1303
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1293
Number of HSP's gapped (non-prelim): 10
length of query: 297
length of database: 18,247,518
effective HSP length: 102
effective length of query: 195
effective length of database: 14,385,186
effective search space: 2805111270
effective search space used: 2805111270
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.