Search of human proteins with 169216352

Search of human proteins with 169216352

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169216352 PREDICTED: similar to hCG1792883 [Homo sapiens]
         (124 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169217160 PREDICTED: similar to hCG1792883 [Homo sapiens]          259   3e-70
gi|169216352 PREDICTED: similar to hCG1792883 [Homo sapiens]          259   3e-70
gi|169216625 PREDICTED: similar to hCG1792883 [Homo sapiens]          259   3e-70
gi|239746562 PREDICTED: hypothetical protein XP_002343779 [Homo ...    52   9e-08
gi|7657102 FGF receptor activating protein 1 isoform 1 [Homo sap...    29   1.1  
gi|9966847 hypothetical protein LOC57102 [Homo sapiens]                28   1.8  
gi|224177563 FGF receptor activating protein 1 isoform 2 [Homo s...    27   3.1  
gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Ho...    27   5.2  
gi|222831633 glycine N-acyltransferase-like protein 3 [Homo sapi...    26   6.9  

>gi|169217160 PREDICTED: similar to hCG1792883 [Homo sapiens]
          Length = 124

 Score =  259 bits (663), Expect = 3e-70
 Identities = 124/124 (100%), Positives = 124/124 (100%)

Query: 1   MAAAAGLGLQREAAEGKWSAWRMTEETRIVYWIKDRQLTNRDSTILELQKVLKTCCAQSM 60
           MAAAAGLGLQREAAEGKWSAWRMTEETRIVYWIKDRQLTNRDSTILELQKVLKTCCAQSM
Sbjct: 1   MAAAAGLGLQREAAEGKWSAWRMTEETRIVYWIKDRQLTNRDSTILELQKVLKTCCAQSM 60

Query: 61  KIFCCLWNFVYKQLEDAAQGLTMGGDVEEHEDLTADSTIFKFVEAYVSWIGKFPTYNVGS 120
           KIFCCLWNFVYKQLEDAAQGLTMGGDVEEHEDLTADSTIFKFVEAYVSWIGKFPTYNVGS
Sbjct: 61  KIFCCLWNFVYKQLEDAAQGLTMGGDVEEHEDLTADSTIFKFVEAYVSWIGKFPTYNVGS 120

Query: 121 SICF 124
           SICF
Sbjct: 121 SICF 124


>gi|169216352 PREDICTED: similar to hCG1792883 [Homo sapiens]
          Length = 124

 Score =  259 bits (663), Expect = 3e-70
 Identities = 124/124 (100%), Positives = 124/124 (100%)

Query: 1   MAAAAGLGLQREAAEGKWSAWRMTEETRIVYWIKDRQLTNRDSTILELQKVLKTCCAQSM 60
           MAAAAGLGLQREAAEGKWSAWRMTEETRIVYWIKDRQLTNRDSTILELQKVLKTCCAQSM
Sbjct: 1   MAAAAGLGLQREAAEGKWSAWRMTEETRIVYWIKDRQLTNRDSTILELQKVLKTCCAQSM 60

Query: 61  KIFCCLWNFVYKQLEDAAQGLTMGGDVEEHEDLTADSTIFKFVEAYVSWIGKFPTYNVGS 120
           KIFCCLWNFVYKQLEDAAQGLTMGGDVEEHEDLTADSTIFKFVEAYVSWIGKFPTYNVGS
Sbjct: 61  KIFCCLWNFVYKQLEDAAQGLTMGGDVEEHEDLTADSTIFKFVEAYVSWIGKFPTYNVGS 120

Query: 121 SICF 124
           SICF
Sbjct: 121 SICF 124


>gi|169216625 PREDICTED: similar to hCG1792883 [Homo sapiens]
          Length = 124

 Score =  259 bits (663), Expect = 3e-70
 Identities = 124/124 (100%), Positives = 124/124 (100%)

Query: 1   MAAAAGLGLQREAAEGKWSAWRMTEETRIVYWIKDRQLTNRDSTILELQKVLKTCCAQSM 60
           MAAAAGLGLQREAAEGKWSAWRMTEETRIVYWIKDRQLTNRDSTILELQKVLKTCCAQSM
Sbjct: 1   MAAAAGLGLQREAAEGKWSAWRMTEETRIVYWIKDRQLTNRDSTILELQKVLKTCCAQSM 60

Query: 61  KIFCCLWNFVYKQLEDAAQGLTMGGDVEEHEDLTADSTIFKFVEAYVSWIGKFPTYNVGS 120
           KIFCCLWNFVYKQLEDAAQGLTMGGDVEEHEDLTADSTIFKFVEAYVSWIGKFPTYNVGS
Sbjct: 61  KIFCCLWNFVYKQLEDAAQGLTMGGDVEEHEDLTADSTIFKFVEAYVSWIGKFPTYNVGS 120

Query: 121 SICF 124
           SICF
Sbjct: 121 SICF 124


>gi|239746562 PREDICTED: hypothetical protein XP_002343779 [Homo
          sapiens]
          Length = 71

 Score = 52.4 bits (124), Expect = 9e-08
 Identities = 25/35 (71%), Positives = 29/35 (82%), Gaps = 1/35 (2%)

Query: 57 AQSMKIFCCLWNFVYKQLE-DAAQGLTMGGDVEEH 90
          AQS KIFCCLW+ V KQL+ DAAQGL + G+VEEH
Sbjct: 31 AQSTKIFCCLWDLVCKQLKGDAAQGLAVDGNVEEH 65


>gi|7657102 FGF receptor activating protein 1 isoform 1 [Homo
           sapiens]
          Length = 315

 Score = 28.9 bits (63), Expect = 1.1
 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 8/85 (9%)

Query: 40  NRDSTILELQ----KVLKTCCAQSMKIFCCLWNFVYKQLEDAAQ--GLTMGGDVE-EHED 92
           +RD T++ L+     ++  CC     +FC LW+ ++   E  A   G T         + 
Sbjct: 9   DRDGTLVRLRFTMVALVTVCCPLVAFLFCILWSLLFHFKETTATHCGATPCRMFSAASQP 68

Query: 93  LTADSTIFKF-VEAYVSWIGKFPTY 116
           L  D T+F+    A V W   FP +
Sbjct: 69  LDPDGTLFRLRFTAMVWWAITFPVF 93


>gi|9966847 hypothetical protein LOC57102 [Homo sapiens]
          Length = 552

 Score = 28.1 bits (61), Expect = 1.8
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 33  IKDRQLTNRDSTILELQKVLKTCCAQSM 60
           +K   +T RD  I+ L+ +LK CC   +
Sbjct: 438 VKSGNITARDPAIMGLRNILKVCCTHDI 465


>gi|224177563 FGF receptor activating protein 1 isoform 2 [Homo
           sapiens]
          Length = 307

 Score = 27.3 bits (59), Expect = 3.1
 Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 6/76 (7%)

Query: 7   LGLQREAAEGKWSAWRMTEETRIVYWIKDRQLTNRDSTILELQ----KVLKTCCAQSMKI 62
           LG  R  A      W   E +  +Y +      +RD T++ L+     ++  CC     +
Sbjct: 35  LGPIRGTAPEWHGRWNAAERSDKMYQVP--LPLDRDGTLVRLRFTMVALVTVCCPLVAFL 92

Query: 63  FCCLWNFVYKQLEDAA 78
           FC LW+ ++   E  A
Sbjct: 93  FCILWSLLFHFKETTA 108


>gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Homo
            sapiens]
          Length = 3549

 Score = 26.6 bits (57), Expect = 5.2
 Identities = 12/44 (27%), Positives = 27/44 (61%)

Query: 9    LQREAAEGKWSAWRMTEETRIVYWIKDRQLTNRDSTILELQKVL 52
            +  E  +G   ++RM  ET+ +Y I+DR+ +  + T ++ ++V+
Sbjct: 1300 ITEEVIQGDVKSYRMLFETQPLYAIQDREGSYHEVTTVKKEEVI 1343


>gi|222831633 glycine N-acyltransferase-like protein 3 [Homo
          sapiens]
          Length = 288

 Score = 26.2 bits (56), Expect = 6.9
 Identities = 10/29 (34%), Positives = 20/29 (68%)

Query: 40 NRDSTILELQKVLKTCCAQSMKIFCCLWN 68
          N  + +L L+K+LK+C  +S+K++  + N
Sbjct: 5  NCSTKLLILEKMLKSCFPESLKVYGAVMN 33


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.133    0.426 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,328,722
Number of Sequences: 37866
Number of extensions: 147953
Number of successful extensions: 328
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 320
Number of HSP's gapped (non-prelim): 9
length of query: 124
length of database: 18,247,518
effective HSP length: 89
effective length of query: 35
effective length of database: 14,877,444
effective search space: 520710540
effective search space used: 520710540
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.