Guide to the Human Genome
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Name: LOC100131755 Sequence: fasta or formatted (124aa) NCBI GI: 169216352
Description:

PREDICTED: similar to hCG1792883

Not currently referenced in the text

Other entries for this name:
alt mRNA {124aa} PREDICTED: similar to hCG1792883
alt mRNA {124aa} PREDICTED: similar to hCG1792883
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.7         12           4
 C cysteine            4.0          5           2
 D aspartate           4.8          6           1
 E glutamate           8.1         10           2
 F phenylalanine       4.8          6           1
 G glycine             6.5          8           2
 H histidine           0.8          1           1
 I isoleucine          5.6          7           1
 K lysine              6.5          8           1
 L leucine             8.1         10           1
 M methionine          3.2          4           1
 N asparagine          2.4          3           1
 P proline             0.8          1           1
 Q glutamine           4.8          6           1
 R arginine            4.0          5           1
 S serine              5.6          7           2
 T threonine           7.3          9           1
 V valine              5.6          7           1
 W tryptophan          4.0          5           1
 Y tyrosine            3.2          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to hCG1792883 
LOC100131755          1.000   PREDICTED: similar to hCG1792883 
LOC100131755          1.000   PREDICTED: similar to hCG1792883 
LOC100288117          0.115   PREDICTED: hypothetical protein XP_002343779 
PGAP2                 0.017   FGF receptor activating protein 1 isoform 1 
C12orf4               0.013   hypothetical protein LOC57102 
PGAP2                 0.009   FGF receptor activating protein 1 isoform 2 
XIRP2                 0.009   xin actin-binding repeat containing 2 isoform 1 [Ho...
C6orf140              0.004   glycine N-acyltransferase-like protein 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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