Guide to the Human Genome
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Search of human proteins with 11120736

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|11120736 double homeobox, 1 [Homo sapiens]
         (170 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|207442670 double homeobox, 5 [Homo sapiens]                        346   6e-96
gi|11120736 double homeobox, 1 [Homo sapiens]                         346   6e-96
gi|207442678 double homeobox, 3 [Homo sapiens]                        339   8e-94
gi|239744246 PREDICTED: hypothetical protein XP_002343082 [Homo ...   279   9e-76
gi|239744249 PREDICTED: similar to double homeobox, 4 [Homo sapi...   277   4e-75
gi|239744248 PREDICTED: similar to double homeobox, 4 [Homo sapi...   277   4e-75
gi|239744242 PREDICTED: similar to double homeobox, 4 [Homo sapi...   277   4e-75
gi|239744240 PREDICTED: similar to double homeobox, 4 [Homo sapi...   277   4e-75
gi|239742468 PREDICTED: double homeobox, 4-like [Homo sapiens]        277   4e-75
gi|239742467 PREDICTED: double homeobox, 4-like [Homo sapiens]        277   4e-75
gi|194272172 double homeobox, 4 [Homo sapiens]                        277   4e-75
gi|194272217 double homeobox, 4-like [Homo sapiens]                   277   4e-75
gi|194272216 double homeobox, 4-like [Homo sapiens]                   277   4e-75
gi|194272215 double homeobox, 4-like [Homo sapiens]                   277   4e-75
gi|194272192 double homeobox, 4-like [Homo sapiens]                   277   4e-75
gi|239744244 PREDICTED: similar to double homeobox, 4 [Homo sapi...   275   2e-74
gi|239742065 PREDICTED: hypothetical protein XP_002342402 [Homo ...   260   5e-70
gi|239758067 PREDICTED: similar to facioscapulohumeral muscular ...   249   1e-66
gi|239758001 PREDICTED: similar to facioscapulohumeral muscular ...   249   1e-66
gi|239752536 PREDICTED: hypothetical protein XP_002346688 [Homo ...   248   2e-66
gi|169217788 PREDICTED: similar to putative DUX4 protein [Homo s...   236   9e-63
gi|89062404 PREDICTED: similar to putative DUX4 protein [Homo sa...   236   9e-63
gi|239752515 PREDICTED: similar to double homeobox, 4 [Homo sapi...   228   1e-60
gi|239758086 PREDICTED: similar to double homeobox, 4 [Homo sapi...   220   4e-58
gi|239758111 PREDICTED: similar to facioscapulohumeral muscular ...   143   8e-35
gi|239752588 PREDICTED: hypothetical protein XP_002348309, parti...   110   4e-25
gi|61969662 double homeobox A [Homo sapiens]                          106   8e-24
gi|239751129 PREDICTED: hypothetical protein XP_002347726 [Homo ...    98   4e-21
gi|239745620 PREDICTED: hypothetical protein XP_002344158 [Homo ...    98   4e-21
gi|13994335 Mix-like homeobox protein 1 [Homo sapiens]                 70   7e-13

>gi|207442670 double homeobox, 5 [Homo sapiens]
          Length = 197

 Score =  346 bits (887), Expect = 6e-96
 Identities = 170/170 (100%), Positives = 170/170 (100%)

Query: 1   MALLTALDDTLPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEELAQGIDIPE 60
           MALLTALDDTLPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEELAQGIDIPE
Sbjct: 28  MALLTALDDTLPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEELAQGIDIPE 87

Query: 61  PRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPG 120
           PRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPG
Sbjct: 88  PRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPG 147

Query: 121 IAAREELARETGLPESRIQIWFQNRRARHRGQSGRAPTQASIRCNAAPIG 170
           IAAREELARETGLPESRIQIWFQNRRARHRGQSGRAPTQASIRCNAAPIG
Sbjct: 148 IAAREELARETGLPESRIQIWFQNRRARHRGQSGRAPTQASIRCNAAPIG 197


>gi|11120736 double homeobox, 1 [Homo sapiens]
          Length = 170

 Score =  346 bits (887), Expect = 6e-96
 Identities = 170/170 (100%), Positives = 170/170 (100%)

Query: 1   MALLTALDDTLPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEELAQGIDIPE 60
           MALLTALDDTLPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEELAQGIDIPE
Sbjct: 1   MALLTALDDTLPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEELAQGIDIPE 60

Query: 61  PRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPG 120
           PRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPG
Sbjct: 61  PRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPG 120

Query: 121 IAAREELARETGLPESRIQIWFQNRRARHRGQSGRAPTQASIRCNAAPIG 170
           IAAREELARETGLPESRIQIWFQNRRARHRGQSGRAPTQASIRCNAAPIG
Sbjct: 121 IAAREELARETGLPESRIQIWFQNRRARHRGQSGRAPTQASIRCNAAPIG 170


>gi|207442678 double homeobox, 3 [Homo sapiens]
          Length = 197

 Score =  339 bits (869), Expect = 8e-94
 Identities = 166/170 (97%), Positives = 168/170 (98%)

Query: 1   MALLTALDDTLPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEELAQGIDIPE 60
           MALLTALDDTLPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKE+LAQGIDIPE
Sbjct: 28  MALLTALDDTLPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEQLAQGIDIPE 87

Query: 61  PRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPG 120
           PRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPG
Sbjct: 88  PRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPG 147

Query: 121 IAAREELARETGLPESRIQIWFQNRRARHRGQSGRAPTQASIRCNAAPIG 170
           I AREELARETGLPESRIQ+WFQNRRARH GQSGRAPTQASIRCNAAPIG
Sbjct: 148 IPAREELARETGLPESRIQLWFQNRRARHWGQSGRAPTQASIRCNAAPIG 197


>gi|239744246 PREDICTED: hypothetical protein XP_002343082 [Homo
           sapiens]
          Length = 483

 Score =  279 bits (713), Expect = 9e-76
 Identities = 140/170 (82%), Positives = 147/170 (86%)

Query: 1   MALLTALDDTLPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEELAQGIDIPE 60
           MAL T  D TLP EA+G GRR  L+ TPSQS+ALRACFERN YPGIAT+E LAQ I IPE
Sbjct: 62  MALPTPSDSTLPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPE 121

Query: 61  PRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPG 120
           PRVQIWFQNERS QLRQHRR+SRPWPGRR P +GRRKRTA+TGSQTALLLRAFEKDRFPG
Sbjct: 122 PRVQIWFQNERSRQLRQHRRESRPWPGRRGPPEGRRKRTAVTGSQTALLLRAFEKDRFPG 181

Query: 121 IAAREELARETGLPESRIQIWFQNRRARHRGQSGRAPTQASIRCNAAPIG 170
           IAAREELARETGLPESRIQIWFQNRRARH GQ GRAP QA   CNAAP G
Sbjct: 182 IAAREELARETGLPESRIQIWFQNRRARHPGQGGRAPAQAGGLCNAAPGG 231


>gi|239744249 PREDICTED: similar to double homeobox, 4 [Homo
           sapiens]
          Length = 483

 Score =  277 bits (708), Expect = 4e-75
 Identities = 139/170 (81%), Positives = 147/170 (86%)

Query: 1   MALLTALDDTLPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEELAQGIDIPE 60
           MAL T  D TLP EA+G GRR  L+ TPSQS+ALRACFERN YPGIAT+E LAQ I IPE
Sbjct: 62  MALPTPSDSTLPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPE 121

Query: 61  PRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPG 120
           PRVQIWFQNERS QLRQHRR+SRPWPGRR P +GRRKRTA+TGSQTALLLRAFEKDRFPG
Sbjct: 122 PRVQIWFQNERSRQLRQHRRESRPWPGRRGPPEGRRKRTAVTGSQTALLLRAFEKDRFPG 181

Query: 121 IAAREELARETGLPESRIQIWFQNRRARHRGQSGRAPTQASIRCNAAPIG 170
           IAAREELARETGLPESRIQIWFQNRRARH GQ GRAP QA   C+AAP G
Sbjct: 182 IAAREELARETGLPESRIQIWFQNRRARHPGQGGRAPAQAGGLCSAAPGG 231


>gi|239744248 PREDICTED: similar to double homeobox, 4 [Homo
           sapiens]
          Length = 483

 Score =  277 bits (708), Expect = 4e-75
 Identities = 139/170 (81%), Positives = 147/170 (86%)

Query: 1   MALLTALDDTLPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEELAQGIDIPE 60
           MAL T  D TLP EA+G GRR  L+ TPSQS+ALRACFERN YPGIAT+E LAQ I IPE
Sbjct: 62  MALPTPSDSTLPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPE 121

Query: 61  PRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPG 120
           PRVQIWFQNERS QLRQHRR+SRPWPGRR P +GRRKRTA+TGSQTALLLRAFEKDRFPG
Sbjct: 122 PRVQIWFQNERSRQLRQHRRESRPWPGRRGPPEGRRKRTAVTGSQTALLLRAFEKDRFPG 181

Query: 121 IAAREELARETGLPESRIQIWFQNRRARHRGQSGRAPTQASIRCNAAPIG 170
           IAAREELARETGLPESRIQIWFQNRRARH GQ GRAP QA   C+AAP G
Sbjct: 182 IAAREELARETGLPESRIQIWFQNRRARHPGQGGRAPAQAGGLCSAAPGG 231


>gi|239744242 PREDICTED: similar to double homeobox, 4 [Homo
           sapiens]
          Length = 483

 Score =  277 bits (708), Expect = 4e-75
 Identities = 139/170 (81%), Positives = 147/170 (86%)

Query: 1   MALLTALDDTLPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEELAQGIDIPE 60
           MAL T  D TLP EA+G GRR  L+ TPSQS+ALRACFERN YPGIAT+E LAQ I IPE
Sbjct: 62  MALPTPSDSTLPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPE 121

Query: 61  PRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPG 120
           PRVQIWFQNERS QLRQHRR+SRPWPGRR P +GRRKRTA+TGSQTALLLRAFEKDRFPG
Sbjct: 122 PRVQIWFQNERSRQLRQHRRESRPWPGRRGPPEGRRKRTAVTGSQTALLLRAFEKDRFPG 181

Query: 121 IAAREELARETGLPESRIQIWFQNRRARHRGQSGRAPTQASIRCNAAPIG 170
           IAAREELARETGLPESRIQIWFQNRRARH GQ GRAP QA   C+AAP G
Sbjct: 182 IAAREELARETGLPESRIQIWFQNRRARHPGQGGRAPAQAGGLCSAAPGG 231


>gi|239744240 PREDICTED: similar to double homeobox, 4 [Homo
           sapiens]
          Length = 483

 Score =  277 bits (708), Expect = 4e-75
 Identities = 139/170 (81%), Positives = 147/170 (86%)

Query: 1   MALLTALDDTLPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEELAQGIDIPE 60
           MAL T  D TLP EA+G GRR  L+ TPSQS+ALRACFERN YPGIAT+E LAQ I IPE
Sbjct: 62  MALPTPSDSTLPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPE 121

Query: 61  PRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPG 120
           PRVQIWFQNERS QLRQHRR+SRPWPGRR P +GRRKRTA+TGSQTALLLRAFEKDRFPG
Sbjct: 122 PRVQIWFQNERSRQLRQHRRESRPWPGRRGPPEGRRKRTAVTGSQTALLLRAFEKDRFPG 181

Query: 121 IAAREELARETGLPESRIQIWFQNRRARHRGQSGRAPTQASIRCNAAPIG 170
           IAAREELARETGLPESRIQIWFQNRRARH GQ GRAP QA   C+AAP G
Sbjct: 182 IAAREELARETGLPESRIQIWFQNRRARHPGQGGRAPAQAGGLCSAAPGG 231


>gi|239742468 PREDICTED: double homeobox, 4-like [Homo sapiens]
          Length = 485

 Score =  277 bits (708), Expect = 4e-75
 Identities = 139/170 (81%), Positives = 147/170 (86%)

Query: 1   MALLTALDDTLPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEELAQGIDIPE 60
           MAL T  D TLP EA+G GRR  L+ TPSQS+ALRACFERN YPGIAT+E LAQ I IPE
Sbjct: 62  MALPTPSDSTLPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPE 121

Query: 61  PRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPG 120
           PRVQIWFQNERS QLRQHRR+SRPWPGRR P +GRRKRTA+TGSQTALLLRAFEKDRFPG
Sbjct: 122 PRVQIWFQNERSRQLRQHRRESRPWPGRRGPPEGRRKRTAVTGSQTALLLRAFEKDRFPG 181

Query: 121 IAAREELARETGLPESRIQIWFQNRRARHRGQSGRAPTQASIRCNAAPIG 170
           IAAREELARETGLPESRIQIWFQNRRARH GQ GRAP QA   C+AAP G
Sbjct: 182 IAAREELARETGLPESRIQIWFQNRRARHPGQGGRAPAQAGGLCSAAPGG 231


>gi|239742467 PREDICTED: double homeobox, 4-like [Homo sapiens]
          Length = 483

 Score =  277 bits (708), Expect = 4e-75
 Identities = 139/170 (81%), Positives = 147/170 (86%)

Query: 1   MALLTALDDTLPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEELAQGIDIPE 60
           MAL T  D TLP EA+G GRR  L+ TPSQS+ALRACFERN YPGIAT+E LAQ I IPE
Sbjct: 62  MALPTPSDSTLPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPE 121

Query: 61  PRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPG 120
           PRVQIWFQNERS QLRQHRR+SRPWPGRR P +GRRKRTA+TGSQTALLLRAFEKDRFPG
Sbjct: 122 PRVQIWFQNERSRQLRQHRRESRPWPGRRGPPEGRRKRTAVTGSQTALLLRAFEKDRFPG 181

Query: 121 IAAREELARETGLPESRIQIWFQNRRARHRGQSGRAPTQASIRCNAAPIG 170
           IAAREELARETGLPESRIQIWFQNRRARH GQ GRAP QA   C+AAP G
Sbjct: 182 IAAREELARETGLPESRIQIWFQNRRARHPGQGGRAPAQAGGLCSAAPGG 231


>gi|194272172 double homeobox, 4 [Homo sapiens]
          Length = 485

 Score =  277 bits (708), Expect = 4e-75
 Identities = 139/170 (81%), Positives = 147/170 (86%)

Query: 1   MALLTALDDTLPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEELAQGIDIPE 60
           MAL T  D TLP EA+G GRR  L+ TPSQS+ALRACFERN YPGIAT+E LAQ I IPE
Sbjct: 62  MALPTPSDSTLPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPE 121

Query: 61  PRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPG 120
           PRVQIWFQNERS QLRQHRR+SRPWPGRR P +GRRKRTA+TGSQTALLLRAFEKDRFPG
Sbjct: 122 PRVQIWFQNERSRQLRQHRRESRPWPGRRGPPEGRRKRTAVTGSQTALLLRAFEKDRFPG 181

Query: 121 IAAREELARETGLPESRIQIWFQNRRARHRGQSGRAPTQASIRCNAAPIG 170
           IAAREELARETGLPESRIQIWFQNRRARH GQ GRAP QA   C+AAP G
Sbjct: 182 IAAREELARETGLPESRIQIWFQNRRARHPGQGGRAPAQAGGLCSAAPGG 231


>gi|194272217 double homeobox, 4-like [Homo sapiens]
          Length = 485

 Score =  277 bits (708), Expect = 4e-75
 Identities = 139/170 (81%), Positives = 147/170 (86%)

Query: 1   MALLTALDDTLPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEELAQGIDIPE 60
           MAL T  D TLP EA+G GRR  L+ TPSQS+ALRACFERN YPGIAT+E LAQ I IPE
Sbjct: 62  MALPTPSDSTLPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPE 121

Query: 61  PRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPG 120
           PRVQIWFQNERS QLRQHRR+SRPWPGRR P +GRRKRTA+TGSQTALLLRAFEKDRFPG
Sbjct: 122 PRVQIWFQNERSRQLRQHRRESRPWPGRRGPPEGRRKRTAVTGSQTALLLRAFEKDRFPG 181

Query: 121 IAAREELARETGLPESRIQIWFQNRRARHRGQSGRAPTQASIRCNAAPIG 170
           IAAREELARETGLPESRIQIWFQNRRARH GQ GRAP QA   C+AAP G
Sbjct: 182 IAAREELARETGLPESRIQIWFQNRRARHPGQGGRAPAQAGGLCSAAPGG 231


>gi|194272216 double homeobox, 4-like [Homo sapiens]
          Length = 485

 Score =  277 bits (708), Expect = 4e-75
 Identities = 139/170 (81%), Positives = 147/170 (86%)

Query: 1   MALLTALDDTLPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEELAQGIDIPE 60
           MAL T  D TLP EA+G GRR  L+ TPSQS+ALRACFERN YPGIAT+E LAQ I IPE
Sbjct: 62  MALPTPSDSTLPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPE 121

Query: 61  PRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPG 120
           PRVQIWFQNERS QLRQHRR+SRPWPGRR P +GRRKRTA+TGSQTALLLRAFEKDRFPG
Sbjct: 122 PRVQIWFQNERSRQLRQHRRESRPWPGRRGPPEGRRKRTAVTGSQTALLLRAFEKDRFPG 181

Query: 121 IAAREELARETGLPESRIQIWFQNRRARHRGQSGRAPTQASIRCNAAPIG 170
           IAAREELARETGLPESRIQIWFQNRRARH GQ GRAP QA   C+AAP G
Sbjct: 182 IAAREELARETGLPESRIQIWFQNRRARHPGQGGRAPAQAGGLCSAAPGG 231


>gi|194272215 double homeobox, 4-like [Homo sapiens]
          Length = 485

 Score =  277 bits (708), Expect = 4e-75
 Identities = 139/170 (81%), Positives = 147/170 (86%)

Query: 1   MALLTALDDTLPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEELAQGIDIPE 60
           MAL T  D TLP EA+G GRR  L+ TPSQS+ALRACFERN YPGIAT+E LAQ I IPE
Sbjct: 62  MALPTPSDSTLPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPE 121

Query: 61  PRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPG 120
           PRVQIWFQNERS QLRQHRR+SRPWPGRR P +GRRKRTA+TGSQTALLLRAFEKDRFPG
Sbjct: 122 PRVQIWFQNERSRQLRQHRRESRPWPGRRGPPEGRRKRTAVTGSQTALLLRAFEKDRFPG 181

Query: 121 IAAREELARETGLPESRIQIWFQNRRARHRGQSGRAPTQASIRCNAAPIG 170
           IAAREELARETGLPESRIQIWFQNRRARH GQ GRAP QA   C+AAP G
Sbjct: 182 IAAREELARETGLPESRIQIWFQNRRARHPGQGGRAPAQAGGLCSAAPGG 231


>gi|194272192 double homeobox, 4-like [Homo sapiens]
          Length = 485

 Score =  277 bits (708), Expect = 4e-75
 Identities = 139/170 (81%), Positives = 147/170 (86%)

Query: 1   MALLTALDDTLPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEELAQGIDIPE 60
           MAL T  D TLP EA+G GRR  L+ TPSQS+ALRACFERN YPGIAT+E LAQ I IPE
Sbjct: 62  MALPTPSDSTLPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPE 121

Query: 61  PRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPG 120
           PRVQIWFQNERS QLRQHRR+SRPWPGRR P +GRRKRTA+TGSQTALLLRAFEKDRFPG
Sbjct: 122 PRVQIWFQNERSRQLRQHRRESRPWPGRRGPPEGRRKRTAVTGSQTALLLRAFEKDRFPG 181

Query: 121 IAAREELARETGLPESRIQIWFQNRRARHRGQSGRAPTQASIRCNAAPIG 170
           IAAREELARETGLPESRIQIWFQNRRARH GQ GRAP QA   C+AAP G
Sbjct: 182 IAAREELARETGLPESRIQIWFQNRRARHPGQGGRAPAQAGGLCSAAPGG 231


>gi|239744244 PREDICTED: similar to double homeobox, 4 [Homo
           sapiens]
          Length = 483

 Score =  275 bits (702), Expect = 2e-74
 Identities = 138/170 (81%), Positives = 146/170 (85%)

Query: 1   MALLTALDDTLPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEELAQGIDIPE 60
           MAL T  D TLP EA+G GRR  L+ TPSQS+ALRACFERN YPGIAT+E LAQ I IPE
Sbjct: 62  MALPTPSDSTLPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPE 121

Query: 61  PRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPG 120
           PRVQIWFQNERS QLRQHRR+SRPWPGRR P +GRRKRTA+TG QTALLLRAFEKDRFPG
Sbjct: 122 PRVQIWFQNERSRQLRQHRRESRPWPGRRGPPEGRRKRTAVTGFQTALLLRAFEKDRFPG 181

Query: 121 IAAREELARETGLPESRIQIWFQNRRARHRGQSGRAPTQASIRCNAAPIG 170
           IAAREELARETGLPESRIQIWFQNRRARH GQ GRAP QA   C+AAP G
Sbjct: 182 IAAREELARETGLPESRIQIWFQNRRARHPGQGGRAPAQAGGLCSAAPGG 231


>gi|239742065 PREDICTED: hypothetical protein XP_002342402 [Homo
           sapiens]
          Length = 381

 Score =  260 bits (664), Expect = 5e-70
 Identities = 129/159 (81%), Positives = 137/159 (86%)

Query: 12  PEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEELAQGIDIPEPRVQIWFQNER 71
           P  ++G GRR  L+ TPSQS+ LRACFERN YPGIAT+E LAQ I IPEPRVQIWFQNER
Sbjct: 150 PLTSRGRGRRRRLVWTPSQSEVLRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNER 209

Query: 72  SCQLRQHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPGIAAREELARET 131
           S QLRQHRR+SRPWPGRR  Q+GRRKRTA+TGSQTALLLRAFEKDRFPGIAAREELARET
Sbjct: 210 SRQLRQHRRESRPWPGRRGLQEGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARET 269

Query: 132 GLPESRIQIWFQNRRARHRGQSGRAPTQASIRCNAAPIG 170
           GLPESRIQIWFQNRRARH GQ GRAP  A   CNAAP G
Sbjct: 270 GLPESRIQIWFQNRRARHPGQGGRAPAHAGGLCNAAPSG 308


>gi|239758067 PREDICTED: similar to facioscapulohumeral muscular
           dystrophy [Homo sapiens]
          Length = 468

 Score =  249 bits (635), Expect = 1e-66
 Identities = 126/167 (75%), Positives = 137/167 (82%)

Query: 1   MALLTALDDTLPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEELAQGIDIPE 60
           MAL T  D T   EAQG GRR  ++ TPSQ +ALRACFERN Y GI T+E+LAQ I I E
Sbjct: 95  MALPTPSDGTHTAEAQGSGRRRRIVWTPSQREALRACFERNPYLGITTREQLAQAIGILE 154

Query: 61  PRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPG 120
           PRV IWFQNERS QLRQHRR+SRPWPGR  P +GR KRTA+TGSQTAL LRAFEKDRFPG
Sbjct: 155 PRVPIWFQNERSSQLRQHRRKSRPWPGRHGPPEGRGKRTAVTGSQTALFLRAFEKDRFPG 214

Query: 121 IAAREELARETGLPESRIQIWFQNRRARHRGQSGRAPTQASIRCNAA 167
           IAA+EELARET LPESRIQIWFQNRRARH GQ+GRAPT+A   CNAA
Sbjct: 215 IAAKEELARETVLPESRIQIWFQNRRARHPGQAGRAPTKAGSLCNAA 261


>gi|239758001 PREDICTED: similar to facioscapulohumeral muscular
           dystrophy [Homo sapiens]
          Length = 300

 Score =  249 bits (635), Expect = 1e-66
 Identities = 126/170 (74%), Positives = 139/170 (81%)

Query: 1   MALLTALDDTLPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEELAQGIDIPE 60
           MAL T LD T   EAQG GRR  ++ TPSQ +ALRACFERN Y GI T+E+LAQ I I E
Sbjct: 95  MALPTPLDGTHTAEAQGRGRRRRIVWTPSQREALRACFERNPYLGITTREQLAQAIGILE 154

Query: 61  PRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPG 120
           PRVQIWFQNERS QLRQHR++SRPWPGR  P +GRRK+T +TGSQTAL LRAFEKDRFPG
Sbjct: 155 PRVQIWFQNERSSQLRQHRQKSRPWPGRHGPPEGRRKQTTVTGSQTALFLRAFEKDRFPG 214

Query: 121 IAAREELARETGLPESRIQIWFQNRRARHRGQSGRAPTQASIRCNAAPIG 170
           IAA+EELARET LPESRIQIWFQNRRARH GQ+GRAP +A   CNAA  G
Sbjct: 215 IAAKEELARETVLPESRIQIWFQNRRARHPGQAGRAPAKAGGLCNAATGG 264


>gi|239752536 PREDICTED: hypothetical protein XP_002346688 [Homo
           sapiens]
          Length = 236

 Score =  248 bits (632), Expect = 2e-66
 Identities = 126/167 (75%), Positives = 137/167 (82%)

Query: 1   MALLTALDDTLPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEELAQGIDIPE 60
           MAL T  D T   EAQG GRR  ++ TPSQ +ALRACFERN Y GI T+E+LAQ I I E
Sbjct: 39  MALPTPSDGTHTAEAQGWGRRRRIVWTPSQREALRACFERNPYLGITTREQLAQAIGILE 98

Query: 61  PRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPG 120
           PRV IWFQNERS QLRQHRR+SRPWPGR  P +GR KRTA+TGSQTAL LRAFEKDRFPG
Sbjct: 99  PRVPIWFQNERSSQLRQHRRKSRPWPGRHGPPEGRGKRTAVTGSQTALFLRAFEKDRFPG 158

Query: 121 IAAREELARETGLPESRIQIWFQNRRARHRGQSGRAPTQASIRCNAA 167
           IAA+EELARET LPESRIQIWFQNRRARH GQ+GRAPT+A   CNAA
Sbjct: 159 IAAKEELARETVLPESRIQIWFQNRRARHPGQAGRAPTKAGSLCNAA 205


>gi|169217788 PREDICTED: similar to putative DUX4 protein [Homo
           sapiens]
          Length = 422

 Score =  236 bits (601), Expect = 9e-63
 Identities = 121/170 (71%), Positives = 132/170 (77%)

Query: 1   MALLTALDDTLPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEELAQGIDIPE 60
           MAL T L  TLP E+QG G R  L+ TPS+S+ALRACFE N YPGI T   LAQ I I E
Sbjct: 1   MALPTPLYSTLPVESQGRGSRRRLIWTPSKSEALRACFEWNPYPGITTGGRLAQAIGISE 60

Query: 61  PRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPG 120
           PRVQIWFQNERSCQL Q +R+S PWPGR   Q+GRRK TA+TGSQTAL L+AFEKDRFP 
Sbjct: 61  PRVQIWFQNERSCQLMQDQRESWPWPGRCGTQEGRRKPTAVTGSQTALYLQAFEKDRFPD 120

Query: 121 IAAREELARETGLPESRIQIWFQNRRARHRGQSGRAPTQASIRCNAAPIG 170
           IAAREELARETGLPESR +IWFQNRRARH GQ+GR P QA   CN  P G
Sbjct: 121 IAAREELARETGLPESRSEIWFQNRRARHPGQAGREPAQAGGLCNVVPGG 170


>gi|89062404 PREDICTED: similar to putative DUX4 protein [Homo
           sapiens]
          Length = 422

 Score =  236 bits (601), Expect = 9e-63
 Identities = 121/170 (71%), Positives = 132/170 (77%)

Query: 1   MALLTALDDTLPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEELAQGIDIPE 60
           MAL T L  TLP E+QG G R  L+ TPS+S+ALRACFE N YPGI T   LAQ I I E
Sbjct: 1   MALPTPLYSTLPVESQGRGSRRRLIWTPSKSEALRACFEWNPYPGITTGGRLAQAIGISE 60

Query: 61  PRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPG 120
           PRVQIWFQNERSCQL Q +R+S PWPGR   Q+GRRK TA+TGSQTAL L+AFEKDRFP 
Sbjct: 61  PRVQIWFQNERSCQLMQDQRESWPWPGRCGTQEGRRKPTAVTGSQTALYLQAFEKDRFPD 120

Query: 121 IAAREELARETGLPESRIQIWFQNRRARHRGQSGRAPTQASIRCNAAPIG 170
           IAAREELARETGLPESR +IWFQNRRARH GQ+GR P QA   CN  P G
Sbjct: 121 IAAREELARETGLPESRSEIWFQNRRARHPGQAGREPAQAGGLCNVVPGG 170


>gi|239752515 PREDICTED: similar to double homeobox, 4 [Homo
           sapiens]
          Length = 479

 Score =  228 bits (582), Expect = 1e-60
 Identities = 121/170 (71%), Positives = 131/170 (77%)

Query: 1   MALLTALDDTLPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEELAQGIDIPE 60
           MA  T  D TL  EAQG G R  L+ TPSQS AL+AC+ERN Y GIAT+E LAQ I I E
Sbjct: 58  MAFPTPSDGTLTAEAQGWGLRRRLVWTPSQSXALQACYERNPYLGIATRERLAQAIVILE 117

Query: 61  PRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPG 120
           PRVQIWFQNERS QLRQHRR SRPWPGRR  ++  +KRTA+TGS+T LLLRAFEKDRF G
Sbjct: 118 PRVQIWFQNERSRQLRQHRRDSRPWPGRRGLKEVWQKRTAVTGSRTYLLLRAFEKDRFTG 177

Query: 121 IAAREELARETGLPESRIQIWFQNRRARHRGQSGRAPTQASIRCNAAPIG 170
           IA REELARETG PESRIQIWFQNRRARH GQ+GR P  A    N AP G
Sbjct: 178 IATREELARETGTPESRIQIWFQNRRARHPGQAGRVPAHAGGLYNTAPGG 227


>gi|239758086 PREDICTED: similar to double homeobox, 4 [Homo
           sapiens]
          Length = 422

 Score =  220 bits (561), Expect = 4e-58
 Identities = 117/168 (69%), Positives = 128/168 (76%)

Query: 1   MALLTALDDTLPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEELAQGIDIPE 60
           MAL T  D TLP EA G GRR  L+ +P +S AL A  E+N Y GIAT+E L + I IPE
Sbjct: 1   MALPTPSDGTLPAEAWGRGRRRRLVWSPXESQALGASVEQNPYLGIATRERLTRAIVIPE 60

Query: 61  PRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPG 120
            RVQI FQNERS QLRQHR +SRP P R  PQ+GRRKRTA+TGSQT LLLRAFEKDRFPG
Sbjct: 61  SRVQICFQNERSRQLRQHRWESRPRPRRCAPQEGRRKRTAVTGSQTTLLLRAFEKDRFPG 120

Query: 121 IAAREELARETGLPESRIQIWFQNRRARHRGQSGRAPTQASIRCNAAP 168
           IA REELARETGLP SRIQ+WF NRRARH GQ+ RAP QA   CNA P
Sbjct: 121 IATREELARETGLPASRIQMWFPNRRARHPGQAARAPAQAGSLCNAVP 168


>gi|239758111 PREDICTED: similar to facioscapulohumeral muscular
           dystrophy [Homo sapiens]
          Length = 106

 Score =  143 bits (360), Expect = 8e-35
 Identities = 74/104 (71%), Positives = 81/104 (77%)

Query: 1   MALLTALDDTLPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEELAQGIDIPE 60
           MAL T  D TLP EAQG GRR  LL T SQS+ALRACFERN YP IAT+E LAQ I IP+
Sbjct: 1   MALPTPSDGTLPAEAQGRGRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQ 60

Query: 61  PRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGRRKRTAITGS 104
           PRVQIWF NERS  LRQH+ +S PWPGRR  Q+GRRKRTA+T S
Sbjct: 61  PRVQIWFHNERSRYLRQHQWESWPWPGRRGTQEGRRKRTAVTRS 104



 Score = 61.2 bits (147), Expect = 4e-10
 Identities = 29/60 (48%), Positives = 40/60 (66%)

Query: 93  KGRRKRTAITGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARHRGQ 152
           +GRRKR   T SQ+  L   FE++ +P IA RE LA+  G+P+ R+QIWF N R+R+  Q
Sbjct: 18  RGRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQPRVQIWFHNERSRYLRQ 77


>gi|239752588 PREDICTED: hypothetical protein XP_002348309, partial
           [Homo sapiens]
          Length = 327

 Score =  110 bits (276), Expect = 4e-25
 Identities = 55/72 (76%), Positives = 60/72 (83%)

Query: 96  RKRTAITGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARHRGQSGR 155
           +KRTAIT  QTALLLRAFEKD FPGIAAR +LARETGLPESRI +WFQN  ARH GQ+GR
Sbjct: 1   QKRTAITRPQTALLLRAFEKDHFPGIAARVQLARETGLPESRIHVWFQNHTARHPGQAGR 60

Query: 156 APTQASIRCNAA 167
           AP Q +  CNAA
Sbjct: 61  APAQDAGWCNAA 72



 Score = 43.1 bits (100), Expect = 1e-04
 Identities = 18/43 (41%), Positives = 28/43 (65%)

Query: 27 TPSQSDALRACFERNLYPGIATKEELAQGIDIPEPRVQIWFQN 69
          T  Q+  L   FE++ +PGIA + +LA+   +PE R+ +WFQN
Sbjct: 7  TRPQTALLLRAFEKDHFPGIAARVQLARETGLPESRIHVWFQN 49


>gi|61969662 double homeobox A [Homo sapiens]
          Length = 204

 Score =  106 bits (265), Expect = 8e-24
 Identities = 64/149 (42%), Positives = 84/149 (56%), Gaps = 11/149 (7%)

Query: 20  RRMILLSTPSQSDALRACFERNLYPGIATKEELAQGIDIPEPRVQIWFQNERSCQ----- 74
           RR     T  Q   L   F +  YPG ATK++LA  I+  E R+QIWFQN R+       
Sbjct: 16  RRCRTKFTEEQLKILINTFNQKPYPGYATKQKLALEINTEESRIQIWFQNRRARHGFQKR 75

Query: 75  -----LRQHRRQSRPWPGRR-DPQKGRRKRTAITGSQTALLLRAFEKDRFPGIAAREELA 128
                L   + Q +  PG     ++ RR RT  + SQ   L++AF K+ +PGI +REELA
Sbjct: 76  PEAETLESSQSQGQDQPGVEFQSREARRCRTTYSASQLHTLIKAFMKNPYPGIDSREELA 135

Query: 129 RETGLPESRIQIWFQNRRARHRGQSGRAP 157
           +E G+PESR+QIWFQNRR+R   Q  R P
Sbjct: 136 KEIGVPESRVQIWFQNRRSRLLLQRKREP 164


>gi|239751129 PREDICTED: hypothetical protein XP_002347726 [Homo
           sapiens]
          Length = 345

 Score = 97.8 bits (242), Expect = 4e-21
 Identities = 54/141 (38%), Positives = 85/141 (60%), Gaps = 12/141 (8%)

Query: 29  SQSDALRACFERNLYPGIATKEELAQGIDIPEPRVQIWFQNERSCQLR------------ 76
           SQ D L++ F+ + +P  A +E+LA+ I +PE  +Q+WF+N R  Q +            
Sbjct: 25  SQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVKQRKLDYKCFSEKDQT 84

Query: 77  QHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPGIAAREELARETGLPES 136
           Q   QS+       P++ R+K+T IT +Q   L++AFE++ FP IA R++LA +TGL ES
Sbjct: 85  QGHDQSQHLTQEYLPKEARQKQTFITWTQKNRLVQAFERNPFPDIATRKKLAEQTGLQES 144

Query: 137 RIQIWFQNRRARHRGQSGRAP 157
           RIQ+WFQ +R+ +  +S   P
Sbjct: 145 RIQMWFQKQRSLYLKKSRMEP 165



 Score = 56.2 bits (134), Expect = 1e-08
 Identities = 27/55 (49%), Positives = 35/55 (63%)

Query: 96  RKRTAITGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARHR 150
           R R     SQ  +L   F+ D FP  AARE+LA+E G+PES IQ+WF+N R + R
Sbjct: 17  RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVKQR 71



 Score = 52.8 bits (125), Expect = 1e-07
 Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 4/71 (5%)

Query: 11  LPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEELAQGIDIPEPRVQIWFQNE 70
           LP+EA    R+     T +Q + L   FERN +P IAT+++LA+   + E R+Q+WFQ +
Sbjct: 98  LPKEA----RQKQTFITWTQKNRLVQAFERNPFPDIATRKKLAEQTGLQESRIQMWFQKQ 153

Query: 71  RSCQLRQHRRQ 81
           RS  L++ R +
Sbjct: 154 RSLYLKKSRME 164


>gi|239745620 PREDICTED: hypothetical protein XP_002344158 [Homo
           sapiens]
          Length = 345

 Score = 97.8 bits (242), Expect = 4e-21
 Identities = 54/141 (38%), Positives = 85/141 (60%), Gaps = 12/141 (8%)

Query: 29  SQSDALRACFERNLYPGIATKEELAQGIDIPEPRVQIWFQNERSCQLR------------ 76
           SQ D L++ F+ + +P  A +E+LA+ I +PE  +Q+WF+N R  Q +            
Sbjct: 25  SQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVKQRKLDYKCFSEKDQT 84

Query: 77  QHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPGIAAREELARETGLPES 136
           Q   QS+       P++ R+K+T IT +Q   L++AFE++ FP IA R++LA +TGL ES
Sbjct: 85  QGHDQSQHLTQEYLPKEARQKQTFITWTQKNRLVQAFERNPFPDIATRKKLAEQTGLQES 144

Query: 137 RIQIWFQNRRARHRGQSGRAP 157
           RIQ+WFQ +R+ +  +S   P
Sbjct: 145 RIQMWFQKQRSLYLKKSRMEP 165



 Score = 56.2 bits (134), Expect = 1e-08
 Identities = 27/55 (49%), Positives = 35/55 (63%)

Query: 96  RKRTAITGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARHR 150
           R R     SQ  +L   F+ D FP  AARE+LA+E G+PES IQ+WF+N R + R
Sbjct: 17  RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVKQR 71



 Score = 52.8 bits (125), Expect = 1e-07
 Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 4/71 (5%)

Query: 11  LPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEELAQGIDIPEPRVQIWFQNE 70
           LP+EA    R+     T +Q + L   FERN +P IAT+++LA+   + E R+Q+WFQ +
Sbjct: 98  LPKEA----RQKQTFITWTQKNRLVQAFERNPFPDIATRKKLAEQTGLQESRIQMWFQKQ 153

Query: 71  RSCQLRQHRRQ 81
           RS  L++ R +
Sbjct: 154 RSLYLKKSRME 164


>gi|13994335 Mix-like homeobox protein 1 [Homo sapiens]
          Length = 232

 Score = 70.5 bits (171), Expect = 7e-13
 Identities = 35/62 (56%), Positives = 43/62 (69%)

Query: 95  RRKRTAITGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARHRGQSG 154
           RRKRT+ +  Q  LL   F + R+P I  RE LA  T LPESRIQ+WFQNRRA+ R QSG
Sbjct: 87  RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQSG 146

Query: 155 RA 156
           ++
Sbjct: 147 KS 148



 Score = 46.2 bits (108), Expect = 1e-05
 Identities = 27/76 (35%), Positives = 36/76 (47%), Gaps = 3/76 (3%)

Query: 12  PEEAQGPG---RRMILLSTPSQSDALRACFERNLYPGIATKEELAQGIDIPEPRVQIWFQ 68
           P+ A  P    RR     +  Q   L   F R  YP I  +E LA    +PE R+Q+WFQ
Sbjct: 76  PKGAAAPSASQRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQ 135

Query: 69  NERSCQLRQHRRQSRP 84
           N R+   RQ  +  +P
Sbjct: 136 NRRAKSRRQSGKSFQP 151


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.134    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,119,541
Number of Sequences: 37866
Number of extensions: 325041
Number of successful extensions: 1448
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 275
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 831
Number of HSP's gapped (non-prelim): 568
length of query: 170
length of database: 18,247,518
effective HSP length: 95
effective length of query: 75
effective length of database: 14,650,248
effective search space: 1098768600
effective search space used: 1098768600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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