Guide to the Human Genome
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Name: LOC100133211 Sequence: fasta or formatted (185aa) NCBI GI: 169160721
Description:

PREDICTED: similar to related RAS viral (r-ras) oncogene homolog 2

Not currently referenced in the text

Other entries for this name:
alt mRNA {185aa} PREDICTED: similar to related RAS viral (r-ras) oncogene homolog 2
alt mRNA {185aa} PREDICTED: similar to related RAS viral (r-ras) oncogene homolog 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9          9           2
 C cysteine            2.7          5           1
 D aspartate           7.6         14           2
 E glutamate           9.7         18           2
 F phenylalanine       5.9         11           1
 G glycine             4.3          8           1
 H histidine           1.6          3           1
 I isoleucine          5.9         11           2
 K lysine              5.9         11           2
 L leucine             7.0         13           2
 M methionine          3.8          7           1
 N asparagine          1.6          3           1
 P proline             3.2          6           2
 Q glutamine           8.1         15           1
 R arginine            8.1         15           1
 S serine              4.9          9           2
 T threonine           4.9          9           1
 V valine              5.9         11           1
 W tryptophan          0.5          1           1
 Y tyrosine            3.2          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to related RAS viral (r-ras) onc... 
LOC100133211          1.000   PREDICTED: similar to related RAS viral (r-ras) onc...
LOC100133211          1.000   PREDICTED: similar to related RAS viral (r-ras) onc...
RRAS2                 0.884   related RAS viral (r-ras) oncogene homolog 2 isoform...
RRAS2                 0.662   related RAS viral (r-ras) oncogene homolog 2 isofor...
RRAS                  0.545   related RAS viral (r-ras) oncogene homolog 
MRAS                  0.440   muscle RAS oncogene homolog 
MRAS                  0.440   muscle RAS oncogene homolog 
KRAS                  0.395   c-K-ras2 protein isoform b precursor 
HRAS                  0.386   v-Ha-ras Harvey rat sarcoma viral oncogene homolog ...
HRAS                  0.386   v-Ha-ras Harvey rat sarcoma viral oncogene homolog is...
KRAS                  0.375   c-K-ras2 protein isoform a precursor 
NRAS                  0.366   neuroblastoma RAS viral (v-ras) oncogene homolog [Hom...
RIT1                  0.364   Ras-like without CAAX 1 
RALB                  0.358   v-ral simian leukemia viral oncogene homolog B 
RALA                  0.355   ras related v-ral simian leukemia viral oncogene hom...
RIT2                  0.349   Ras-like without CAAX 2 
RAP1A                 0.338   RAP1A, member of RAS oncogene family 
RAP1A                 0.338   RAP1A, member of RAS oncogene family 
RAP1B                 0.338   RAP1B, member of RAS oncogene family 
RAP1B                 0.338   RAP1B, member of RAS oncogene family 
HRAS                  0.335   v-Ha-ras Harvey rat sarcoma viral oncogene homolog i...
RERG                  0.295   RAS-like, estrogen-regulated, growth inhibitor [Homo...
RAP2B                 0.295   RAP2B, member of RAS oncogene family 
RAP2A                 0.295   RAP2A, member of RAS oncogene family 
RAP2C                 0.293   RAP2C, member of RAS oncogene family 
DIRAS2                0.210   Di-Ras2 
RHEB                  0.196   Ras homolog enriched in brain 
RAB23                 0.190   Ras-related protein Rab-23 
RAB23                 0.190   Ras-related protein Rab-23 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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