Search of human proteins with 16905507

Search of human proteins with 16905507

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|16905507 progressive ankylosis protein [Homo sapiens]
         (492 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|16905507 progressive ankylosis protein [Homo sapiens]              978   0.0  
gi|32481206 lactase-phlorizin hydrolase preproprotein [Homo sapi...    34   0.35 
gi|188536108 cardiolipin synthase 1 isoform 2 [Homo sapiens]           30   5.0  
gi|10092647 cardiolipin synthase 1 isoform 1 [Homo sapiens]            30   5.0  
gi|7108336 cholinergic receptor, muscarinic 5 [Homo sapiens]           29   8.5  
gi|7705887 hypothetical protein LOC51161 [Homo sapiens]                29   8.5  

>gi|16905507 progressive ankylosis protein [Homo sapiens]
          Length = 492

 Score =  978 bits (2527), Expect = 0.0
 Identities = 492/492 (100%), Positives = 492/492 (100%)

Query: 1   MVKFPALTHYWPLIRFLVPLGITNIAIDFGEQALNRGIAAVKEDAVEMLASYGLAYSLMK 60
           MVKFPALTHYWPLIRFLVPLGITNIAIDFGEQALNRGIAAVKEDAVEMLASYGLAYSLMK
Sbjct: 1   MVKFPALTHYWPLIRFLVPLGITNIAIDFGEQALNRGIAAVKEDAVEMLASYGLAYSLMK 60

Query: 61  FFTGPMSDFKNVGLVFVNSKRDRTKAVLCMVVAGAIAAVFHTLIAYSDLGYYIINKLHHV 120
           FFTGPMSDFKNVGLVFVNSKRDRTKAVLCMVVAGAIAAVFHTLIAYSDLGYYIINKLHHV
Sbjct: 61  FFTGPMSDFKNVGLVFVNSKRDRTKAVLCMVVAGAIAAVFHTLIAYSDLGYYIINKLHHV 120

Query: 121 DESVGSKTRRAFLYLAAFPFMDAMAWTHAGILLKHKYSFLVGCASISDVIAQVVFVAILL 180
           DESVGSKTRRAFLYLAAFPFMDAMAWTHAGILLKHKYSFLVGCASISDVIAQVVFVAILL
Sbjct: 121 DESVGSKTRRAFLYLAAFPFMDAMAWTHAGILLKHKYSFLVGCASISDVIAQVVFVAILL 180

Query: 181 HSHLECREPLLIPILSLYMGALVRCTTLCLGYYKNIHDIIPDRSGPELGGDATIRKMLSF 240
           HSHLECREPLLIPILSLYMGALVRCTTLCLGYYKNIHDIIPDRSGPELGGDATIRKMLSF
Sbjct: 181 HSHLECREPLLIPILSLYMGALVRCTTLCLGYYKNIHDIIPDRSGPELGGDATIRKMLSF 240

Query: 241 WWPLALILATQRISRPIVNLFVSRDLGGSSAATEAVAILTATYPVGHMPYGWLTEIRAVY 300
           WWPLALILATQRISRPIVNLFVSRDLGGSSAATEAVAILTATYPVGHMPYGWLTEIRAVY
Sbjct: 241 WWPLALILATQRISRPIVNLFVSRDLGGSSAATEAVAILTATYPVGHMPYGWLTEIRAVY 300

Query: 301 PAFDKNNPSNKLVSTSNTVTAAHIKKFTFVCMALSLTLCFVMFWTPNVSEKILIDIIGVD 360
           PAFDKNNPSNKLVSTSNTVTAAHIKKFTFVCMALSLTLCFVMFWTPNVSEKILIDIIGVD
Sbjct: 301 PAFDKNNPSNKLVSTSNTVTAAHIKKFTFVCMALSLTLCFVMFWTPNVSEKILIDIIGVD 360

Query: 361 FAFAELCVVPLRIFSFFPVPVTVRAHLTGWLMTLKKTFVLAPSSVLRIIVLIASLVVLPY 420
           FAFAELCVVPLRIFSFFPVPVTVRAHLTGWLMTLKKTFVLAPSSVLRIIVLIASLVVLPY
Sbjct: 361 FAFAELCVVPLRIFSFFPVPVTVRAHLTGWLMTLKKTFVLAPSSVLRIIVLIASLVVLPY 420

Query: 421 LGVHGATLGVGSLLAGFVGESTMVAIAACYVYRKQKKKMENESATEGEDSAMTDMPPTEE 480
           LGVHGATLGVGSLLAGFVGESTMVAIAACYVYRKQKKKMENESATEGEDSAMTDMPPTEE
Sbjct: 421 LGVHGATLGVGSLLAGFVGESTMVAIAACYVYRKQKKKMENESATEGEDSAMTDMPPTEE 480

Query: 481 VTDIVEMREENE 492
           VTDIVEMREENE
Sbjct: 481 VTDIVEMREENE 492


>gi|32481206 lactase-phlorizin hydrolase preproprotein [Homo
           sapiens]
          Length = 1927

 Score = 33.9 bits (76), Expect = 0.35
 Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 5/64 (7%)

Query: 24  NIAIDFGEQALNRGIAAVKEDAVEMLASYGLAYSLMKFFTGPMSDFKNVGLVFVN---SK 80
           ++ +D+  Q +N  + A+KED+V+ + SY +A SL+  F GP    +  GL  VN   S 
Sbjct: 769 SLRVDYFNQYINEVLKAIKEDSVD-VRSY-IARSLIDGFEGPSGYSQRFGLHHVNFSDSS 826

Query: 81  RDRT 84
           + RT
Sbjct: 827 KSRT 830


>gi|188536108 cardiolipin synthase 1 isoform 2 [Homo sapiens]
          Length = 202

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 19/87 (21%)

Query: 348 VSEKILIDIIGVDFAFAELCVVPLRI-----------------FSFFPVPVTVRAHLTGW 390
           +++KILI I+ V   +A+L  VPL                   +   P P T+  +    
Sbjct: 72  LADKILISILYVSLTYADLIPVPLTYMIISRDVMLIAAVFYVRYRTLPTPRTLAKYFNPC 131

Query: 391 LMT--LKKTFVLAPSSVLRIIVLIASL 415
             T  LK TF+   ++ +++I++ ASL
Sbjct: 132 YATARLKPTFISKVNTAVQLILVAASL 158


>gi|10092647 cardiolipin synthase 1 isoform 1 [Homo sapiens]
          Length = 301

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 19/87 (21%)

Query: 348 VSEKILIDIIGVDFAFAELCVVPLRI-----------------FSFFPVPVTVRAHLTGW 390
           +++KILI I+ V   +A+L  VPL                   +   P P T+  +    
Sbjct: 171 LADKILISILYVSLTYADLIPVPLTYMIISRDVMLIAAVFYVRYRTLPTPRTLAKYFNPC 230

Query: 391 LMT--LKKTFVLAPSSVLRIIVLIASL 415
             T  LK TF+   ++ +++I++ ASL
Sbjct: 231 YATARLKPTFISKVNTAVQLILVAASL 257


>gi|7108336 cholinergic receptor, muscarinic 5 [Homo sapiens]
          Length = 532

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 31/135 (22%), Positives = 61/135 (45%), Gaps = 27/135 (20%)

Query: 357 IGVDFAFAELCVVPLRIFSF---FPV--PVTVRAHLT----------GWLMTLKKTFVLA 401
           + +D+  +   V+ L + SF   F +  P+T RA  T           WL++    F+L 
Sbjct: 107 LALDYVASNASVMNLLVISFDRYFSITRPLTYRAKRTPKRAGIMIGLAWLIS----FILW 162

Query: 402 PSSVLRIIVLIASLVV------LPYLGVHGATLGVGSLLAGFVGESTMVAIAACYVYRKQ 455
             ++L    L+    V      + +L     T+  G+ +A F    +++ I  C +YR+ 
Sbjct: 163 APAILCWQYLVGKRTVPLDECQIQFLSE--PTITFGTAIAAFYIPVSVMTILYCRIYRET 220

Query: 456 KKKMENESATEGEDS 470
           +K+ ++ +  +G DS
Sbjct: 221 EKRTKDLADLQGSDS 235


>gi|7705887 hypothetical protein LOC51161 [Homo sapiens]
          Length = 162

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 5/61 (8%)

Query: 425 GATLGVGSLLAGFVGESTMVAIA-ACYVYRKQKKKMENESATEGEDSAMTDMPPTEEVTD 483
           G T GVG++L  F G  T++ +A A  +Y ++KK++E       +   M +  PTEE  +
Sbjct: 54  GGTAGVGTMLLSF-GIITVIGLAVALVLYIRKKKRLEK---LRHQLMPMYNFDPTEEQDE 109

Query: 484 I 484
           +
Sbjct: 110 L 110


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.326    0.139    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,638,652
Number of Sequences: 37866
Number of extensions: 665066
Number of successful extensions: 1653
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1650
Number of HSP's gapped (non-prelim): 6
length of query: 492
length of database: 18,247,518
effective HSP length: 106
effective length of query: 386
effective length of database: 14,233,722
effective search space: 5494216692
effective search space used: 5494216692
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.