Search of human proteins with 167004078

Search of human proteins with 167004078

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|167004078 methyltransferase-like protein 1 isoform a [Homo
sapiens]
         (276 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|167004078 methyltransferase-like protein 1 isoform a [Homo sa...   572   e-163
gi|167004110 methyltransferase-like protein 1 isoform c [Homo sa...   196   2e-50
gi|38327625 citrate synthase precursor [Homo sapiens]                  30   3.0  
gi|145580602 translocation associated membrane protein 1-like 1 ...    29   5.1  
gi|7662086 Rho guanine nucleotide exchange factor (GEF) 11 isofo...    28   8.7  
gi|90819237 myeloid/lymphoid or mixed-lineage leukemia (trithora...    28   8.7  
gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transfera...    28   8.7  

>gi|167004078 methyltransferase-like protein 1 isoform a [Homo
           sapiens]
          Length = 276

 Score =  572 bits (1475), Expect = e-163
 Identities = 276/276 (100%), Positives = 276/276 (100%)

Query: 1   MAAETRNVAGAEAPPPQKRYYRQRAHSNPMADHTLRYPVKPEEMDWSELYPEFFAPLTQN 60
           MAAETRNVAGAEAPPPQKRYYRQRAHSNPMADHTLRYPVKPEEMDWSELYPEFFAPLTQN
Sbjct: 1   MAAETRNVAGAEAPPPQKRYYRQRAHSNPMADHTLRYPVKPEEMDWSELYPEFFAPLTQN 60

Query: 61  QSHDDPKDKKEKRAQAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRI 120
           QSHDDPKDKKEKRAQAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRI
Sbjct: 61  QSHDDPKDKKEKRAQAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRI 120

Query: 121 RALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLTKMFFLFPDPHFKRTKHKWRIISPTL 180
           RALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLTKMFFLFPDPHFKRTKHKWRIISPTL
Sbjct: 121 RALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLTKMFFLFPDPHFKRTKHKWRIISPTL 180

Query: 181 LAEYAYVLRVGGLVYTITDVLELHDWMCTHFEEHPLFERVPLEDLSEDPVVGHLGTSTEE 240
           LAEYAYVLRVGGLVYTITDVLELHDWMCTHFEEHPLFERVPLEDLSEDPVVGHLGTSTEE
Sbjct: 181 LAEYAYVLRVGGLVYTITDVLELHDWMCTHFEEHPLFERVPLEDLSEDPVVGHLGTSTEE 240

Query: 241 GKKVLRNGGKNFPAIFRRIQDPVLQAVTSQTSLPGH 276
           GKKVLRNGGKNFPAIFRRIQDPVLQAVTSQTSLPGH
Sbjct: 241 GKKVLRNGGKNFPAIFRRIQDPVLQAVTSQTSLPGH 276


>gi|167004110 methyltransferase-like protein 1 isoform c [Homo
          sapiens]
          Length = 155

 Score =  196 bits (498), Expect = 2e-50
 Identities = 91/93 (97%), Positives = 92/93 (98%)

Query: 1  MAAETRNVAGAEAPPPQKRYYRQRAHSNPMADHTLRYPVKPEEMDWSELYPEFFAPLTQN 60
          MAAETRNVAGAEAPPPQKRYYRQRAHSNPMADHTLRYPVKPEEMDWSELYPEFFAPLTQN
Sbjct: 1  MAAETRNVAGAEAPPPQKRYYRQRAHSNPMADHTLRYPVKPEEMDWSELYPEFFAPLTQN 60

Query: 61 QSHDDPKDKKEKRAQAQVEFADIGCGYGGLLVE 93
          QSHDDPKDKKEKRAQAQVEFADIGCGYGGLL +
Sbjct: 61 QSHDDPKDKKEKRAQAQVEFADIGCGYGGLLAD 93


>gi|38327625 citrate synthase precursor [Homo sapiens]
          Length = 466

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 22/80 (27%)

Query: 111 KVSDYVQDRIRALRAAPAGGFQNI-------ACLRSNAMKHLPNFFYKGQLTKMFFLFPD 163
           K+ DY+ + + + R  P  G   +        C R  A+KHLPN               D
Sbjct: 327 KLRDYIWNTLNSGRVVPGYGHAVLRKTDPRYTCQREFALKHLPN---------------D 371

Query: 164 PHFKRTKHKWRIISPTLLAE 183
           P FK     ++I+   LL +
Sbjct: 372 PMFKLVAQLYKIVPNVLLEQ 391


>gi|145580602 translocation associated membrane protein 1-like 1
           [Homo sapiens]
          Length = 369

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 17/77 (22%)

Query: 148 FFYKGQLTKMFFLFPDPHFKRTK-------------HKWRIISPTLLAEYAYVLRVGGLV 194
           FFY  QL   F  FP+ +F++TK             H + I    LL    Y+  +G L+
Sbjct: 167 FFYISQLAYWFHAFPELYFQKTKKQDIPRQLVYIGLHLFHITGAYLL----YLNHLGLLL 222

Query: 195 YTITDVLELHDWMCTHF 211
             +   +EL   MC  F
Sbjct: 223 LVLHYFVELLSHMCGLF 239


>gi|7662086 Rho guanine nucleotide exchange factor (GEF) 11 isoform
           1 [Homo sapiens]
          Length = 1522

 Score = 28.1 bits (61), Expect = 8.7
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)

Query: 212 EEHPLFERVPLE-DLSEDPVVGHLGTSTEEGKKVLRNGGKNFPAI 255
           EE  L + +PL  D S+ P  G L   ++EG   L +G + FP++
Sbjct: 189 EEKELQDILPLYGDTSQRPSEGRLSLDSQEGDSGLDSGTERFPSL 233


>gi|90819237 myeloid/lymphoid or mixed-lineage leukemia (trithorax
            homolog, Drosophila); translocated to, 4 isoform 1 [Homo
            sapiens]
          Length = 1834

 Score = 28.1 bits (61), Expect = 8.7
 Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 6/74 (8%)

Query: 10   GAEAPPPQKRY-YRQRAHSNPMADHTLR---YPVKPEEMDWSELYPEFFAPLTQNQ--SH 63
            GA  PPPQ+   Y +    +P +  T +   Y  + EE D S   P  +   T     +H
Sbjct: 1712 GAPPPPPQRNASYLKTQVLSPDSLFTAKFVAYNEEEEEEDCSLAGPNSYPGSTGAAVGAH 1771

Query: 64   DDPKDKKEKRAQAQ 77
            D  +D KEKR+++Q
Sbjct: 1772 DACRDAKEKRSKSQ 1785


>gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transferase
           4 [Homo sapiens]
          Length = 1039

 Score = 28.1 bits (61), Expect = 8.7
 Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 3/64 (4%)

Query: 41  PEEMDWSELYPEFFAPLTQNQSHDDPKDKKEKRAQAQVEFADIGCG--YGGLLVELS-PL 97
           PE  D   L+P     L  N +H  P  ++E + Q  +   +  CG   G L   L  PL
Sbjct: 86  PEGRDLDMLFPGGAGRLPLNFTHQTPPWREEYKGQVNLHVFEDWCGGAVGHLRRNLHFPL 145

Query: 98  FPDT 101
           FP T
Sbjct: 146 FPHT 149


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.138    0.426 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,571,390
Number of Sequences: 37866
Number of extensions: 516922
Number of successful extensions: 1080
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1078
Number of HSP's gapped (non-prelim): 7
length of query: 276
length of database: 18,247,518
effective HSP length: 101
effective length of query: 175
effective length of database: 14,423,052
effective search space: 2524034100
effective search space used: 2524034100
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.