Search of human proteins with 16418411

Search of human proteins with 16418411

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|16418411 testis specific, 13 [Homo sapiens]
         (275 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|16418411 testis specific, 13 [Homo sapiens]                        551   e-157
gi|194328736 PHD finger protein 10 isoform b [Homo sapiens]            32   0.60 
gi|62899035 establishment of cohesion 1 homolog 2 [Homo sapiens]       32   0.79 
gi|186910286 ribonuclease H2, subunit B isoform 1 [Homo sapiens]       32   0.79 
gi|142976783 PDZ domain containing RING finger 4 [Homo sapiens]        30   2.3  
gi|194328734 PHD finger protein 10 isoform a [Homo sapiens]            30   2.3  
gi|38524622 formin binding protein 1 [Homo sapiens]                    29   3.9  
gi|153945846 inositol 1,4,5-triphosphate receptor, type 3 [Homo ...    29   5.1  
gi|4504507 3 beta-hydroxysteroid dehydrogenase 1 [Homo sapiens]        28   6.7  
gi|190341068 forkhead-associated (FHA) phosphopeptide binding do...    28   6.7  
gi|4504509 3 beta-hydroxysteroid dehydrogenase 2 [Homo sapiens]        28   8.7  
gi|31657092 ATP binding cassette, sub-family A (ABC1), member 13...    28   8.7  
gi|76443679 proprotein convertase subtilisin/kexin type 4 [Homo ...    28   8.7  

>gi|16418411 testis specific, 13 [Homo sapiens]
          Length = 275

 Score =  551 bits (1421), Expect = e-157
 Identities = 275/275 (100%), Positives = 275/275 (100%)

Query: 1   MSQKRQTKFQNGKSKTSENSSAKREKGMVVNSKEISDAVGQSKFVLENLRHYTVHPNLAQ 60
           MSQKRQTKFQNGKSKTSENSSAKREKGMVVNSKEISDAVGQSKFVLENLRHYTVHPNLAQ
Sbjct: 1   MSQKRQTKFQNGKSKTSENSSAKREKGMVVNSKEISDAVGQSKFVLENLRHYTVHPNLAQ 60

Query: 61  YYKPLKATALQKFLAQNRKNTSFMLKVTQYDQDKTLLIMTNNPPPCSITQQDKESASKYF 120
           YYKPLKATALQKFLAQNRKNTSFMLKVTQYDQDKTLLIMTNNPPPCSITQQDKESASKYF
Sbjct: 61  YYKPLKATALQKFLAQNRKNTSFMLKVTQYDQDKTLLIMTNNPPPCSITQQDKESASKYF 120

Query: 121 SKELLLKVMESHHQHKPTENLWLPRMPQKKKLRSKLKPIFPLILSDDPTSKREQWFRFST 180
           SKELLLKVMESHHQHKPTENLWLPRMPQKKKLRSKLKPIFPLILSDDPTSKREQWFRFST
Sbjct: 121 SKELLLKVMESHHQHKPTENLWLPRMPQKKKLRSKLKPIFPLILSDDPTSKREQWFRFST 180

Query: 181 DNDFKSEGKYSKVYALRTQKKMYPQLTFAPVHERDMRKDASKKSASERPISKVIREPLTL 240
           DNDFKSEGKYSKVYALRTQKKMYPQLTFAPVHERDMRKDASKKSASERPISKVIREPLTL
Sbjct: 181 DNDFKSEGKYSKVYALRTQKKMYPQLTFAPVHERDMRKDASKKSASERPISKVIREPLTL 240

Query: 241 ASLLEDMPTRTAPGESAFRNGRAPQWIIKKATVIG 275
           ASLLEDMPTRTAPGESAFRNGRAPQWIIKKATVIG
Sbjct: 241 ASLLEDMPTRTAPGESAFRNGRAPQWIIKKATVIG 275


>gi|194328736 PHD finger protein 10 isoform b [Homo sapiens]
          Length = 496

 Score = 32.0 bits (71), Expect = 0.60
 Identities = 58/279 (20%), Positives = 108/279 (38%), Gaps = 37/279 (13%)

Query: 10  QNGKSKTSENS------SAKREKGMVVNSKEI---SDAVGQSKFVLENLRHYTVHPN-LA 59
           Q+ K    +NS      S +R  G   +S+     S  +G S +  ENL  Y   P+   
Sbjct: 26  QSPKDDNEDNSNDGTQPSKRRRMGSGDSSRSCETSSQDLGFSYYPAENLIEYKWPPDETG 85

Query: 60  QYY-------KPLKATALQKFLAQNR----KNTSFMLKVTQYDQDKTLLIMTNNPPPCSI 108
           +YY       + L  T+ ++   + R    K   ++ ++    + +  L +T       I
Sbjct: 86  EYYMLQEQVSEYLGVTSFKRKYPERRDLSHKEKLYLRELNVITETQCTLGLTALRSDEVI 145

Query: 109 TQQDKESASKYFSKELLLKVME-----------SHHQHKPTENLWLPRMPQKKKLRSKLK 157
               KE  +K+    ++L+  E           S  Q + T+ +   ++P+  K  +K  
Sbjct: 146 DLMIKEYPAKHAEYSVILQEKERQRITDHYKEYSQMQQQNTQKVEASKVPEYIKKAAKKA 205

Query: 158 PIFPLILSDDPTSKREQWFRFSTDNDFKSEGKYSKVYALRTQKKMYPQLTFAPVHERDMR 217
             F   L+ +   +R  +F   T      +GKY  +   RT+   YP +   P   ++  
Sbjct: 206 AEFNSNLNRERMEERRAYFDLQTHVIQVPQGKYKVLPTERTKVSSYP-VALIPGQFQEYY 264

Query: 218 KDASKKSASERPISKVIREPLTLASLLEDMPTRTAPGES 256
           K  S       P++  + EP     L  ++P   + G+S
Sbjct: 265 KRYSPDELRYLPLNTALYEP----PLDPELPALDSDGDS 299


>gi|62899035 establishment of cohesion 1 homolog 2 [Homo sapiens]
          Length = 601

 Score = 31.6 bits (70), Expect = 0.79
 Identities = 43/212 (20%), Positives = 88/212 (41%), Gaps = 14/212 (6%)

Query: 65  LKATALQKFLAQNRKNT--SFMLKVTQYDQDKTLLIMTNNPPPCSITQQDKESASKYFSK 122
           LK T + +  + N+ +   S +  V+ Y+Q+K  L    NP    + ++ + +  K   +
Sbjct: 60  LKTTEINRLPSANQGSPFKSALSTVSFYNQNKWYL----NPLERKLIKESRSTCLKTNDE 115

Query: 123 ELLLKVMESHHQHKPTENLWLPRMPQKKKLRSKLKPIFPLILSDDPTSKREQWFRF---- 178
           +    ++    Q KP  +    + PQK  L +K +P +  I      S+  +  R     
Sbjct: 116 DKSFPIVTEKMQGKPVCSKKNNKKPQKS-LTAKYQPKYRHIKPVSRNSRNSKQNRVIYKP 174

Query: 179 --STDNDFKSEGKYSKVYALRTQKKMYPQLTFAPVHERDMRKDASKKSASERPISKVIRE 236
               +N+  S    S    + +QK + PQ+T        +RK +S + +S      + R 
Sbjct: 175 IVEKENNCHSAENNSNAPRVLSQK-IKPQVTLQGGAAFFVRKKSSLRKSSLENEPSLGRT 233

Query: 237 PLTLASLLEDMPTRTAPGESAFRNGRAPQWII 268
             + + ++ED    T   +  F   + P+ ++
Sbjct: 234 QKSKSEVIEDSDVETVSEKKTFATRQVPKCLV 265


>gi|186910286 ribonuclease H2, subunit B isoform 1 [Homo sapiens]
          Length = 312

 Score = 31.6 bits (70), Expect = 0.79
 Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 14/79 (17%)

Query: 117 SKYFSKELLLKVMESHHQHKPTENLWLPRMPQKKKLRSKLKPIFPLILSDDPTSKREQWF 176
           S Y  KEL   +  S +   P  +  LP  P KK           + LSD+P   +E + 
Sbjct: 217 SDYIPKELSDDL--SKYLKLPEPSASLPNPPSKK-----------IKLSDEPVEAKEDYT 263

Query: 177 RFSTDNDFKSEGKYSKVYA 195
           +F+T  D K+E K SK+ A
Sbjct: 264 KFNT-KDLKTEKKNSKMTA 281


>gi|142976783 PDZ domain containing RING finger 4 [Homo sapiens]
          Length = 778

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 44/195 (22%), Positives = 78/195 (40%), Gaps = 46/195 (23%)

Query: 13  KSKTSENSSAKREKGMVVNSKEISDAVGQSKFVLENLRHYTVHPNLAQYYKPLKATALQK 72
           K+KT+E   +   K  V+   ++ D   Q K V E++ + + + + +  Y  + A A   
Sbjct: 536 KAKTTEQGCSAESKEKVLEGSKLPD---QEKAVSEHIPYLSPYHSSSYRYANIPAHA--- 589

Query: 73  FLAQNRKNTSFMLKVTQYDQDKTLLIMTNNPPPCSITQQDKESASKYFSKELLLKVMESH 132
                R   S+M  + Q                        +SA +Y   +L L  M   
Sbjct: 590 -----RHYQSYMQLIQQ------------------------KSAVEYAQSQLSLVSMCKE 620

Query: 133 HQHKPTENLWLPRMPQKKKLRSK------LKPIFPLILSDDPTSKREQWFRFSTDNDFKS 186
            Q K +E    P+M  K K+RS        +P+   IL +     +E+    +TD+D  S
Sbjct: 621 SQ-KCSE----PKMEWKVKIRSDGTRYITKRPVRDRILKERALKIKEERSGMTTDDDTMS 675

Query: 187 EGKYSKVYALRTQKK 201
           E K  + ++   +K+
Sbjct: 676 EMKMGRYWSKEERKQ 690


>gi|194328734 PHD finger protein 10 isoform a [Homo sapiens]
          Length = 498

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 28/126 (22%), Positives = 52/126 (41%), Gaps = 5/126 (3%)

Query: 131 SHHQHKPTENLWLPRMPQKKKLRSKLKPIFPLILSDDPTSKREQWFRFSTDNDFKSEGKY 190
           S  Q + T+ +   ++P+  K  +K    F   L+ +   +R  +F   T      +GKY
Sbjct: 181 SQMQQQNTQKVEASKVPEYIKKAAKKAAEFNSNLNRERMEERRAYFDLQTHVIQVPQGKY 240

Query: 191 SKVYALRTQKKMYPQLTFAPVHERDMRKDASKKSASERPISKVIREPLTLASLLEDMPTR 250
             +   RT+   YP +   P   ++  K  S       P++  + EP     L  ++P  
Sbjct: 241 KVLPTERTKVSSYP-VALIPGQFQEYYKRYSPDELRYLPLNTALYEP----PLDPELPAL 295

Query: 251 TAPGES 256
            + G+S
Sbjct: 296 DSDGDS 301


>gi|38524622 formin binding protein 1 [Homo sapiens]
          Length = 617

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 7/79 (8%)

Query: 1   MSQKRQTKFQNGKSKTSENSSAKRE------KGMVVNSKEISDAVGQSKFVLENLRHYTV 54
           +S  +Q +  + K +  +NS  + E      K  + N  E++D  GQ + + EN+    +
Sbjct: 40  LSYAKQLRNLSKKYQPKKNSKEEEEYKYTSCKAFISNLNEMNDYAGQHEVISENMASQII 99

Query: 55  HPNLAQYYKPLKATALQKF 73
             +LA+Y + LK      F
Sbjct: 100 -VDLARYVQELKQERKSNF 117


>gi|153945846 inositol 1,4,5-triphosphate receptor, type 3 [Homo
            sapiens]
          Length = 2671

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 9/59 (15%)

Query: 95   TLLIMTNNPPPCS----ITQQDKESASKYFSKELLLKVMESHHQHKPTENLWLPRMPQK 149
            T LI+ +  P C     +  Q K++ASK     LLL +MES H  +  E + +   PQ+
Sbjct: 1971 TALILNDISPLCKYRMDLVLQLKDNASK-----LLLALMESRHDSENAERILISLRPQE 2024


>gi|4504507 3 beta-hydroxysteroid dehydrogenase 1 [Homo sapiens]
          Length = 373

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 10/29 (34%), Positives = 17/29 (58%)

Query: 127 KVMESHHQHKPTENLWLPRMPQKKKLRSK 155
           +++++ H+ +P EN W    P  KKL  K
Sbjct: 136 EIIQNGHEEEPLENTWPAPYPHSKKLAEK 164


>gi|190341068 forkhead-associated (FHA) phosphopeptide binding
           domain 1 [Homo sapiens]
          Length = 1412

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 34/177 (19%), Positives = 71/177 (40%), Gaps = 27/177 (15%)

Query: 3   QKRQTKFQNGKSKTSENSSAKREKGMVVNSKEISDAVG-----QSKFVLENLRHYTVHPN 57
           +K+    +N  +K  E    K +K  V+N+K +SDA+      Q     E+L+  ++   
Sbjct: 817 KKKVQDLENRLTKQKEELELKEQKEDVLNNK-LSDALAMVEETQKTKATESLKAESLALK 875

Query: 58  LAQYYKPLKATALQKFLAQNRKNTSFMLKVTQYDQDKTLLIMTNNPPPCSITQQDKESAS 117
           L +    L+ T  +  + + R        + Q    K L              QD++ + 
Sbjct: 876 LNETLAELETTKTKMIMVEERL-------ILQQKMVKAL--------------QDEQESQ 914

Query: 118 KYFSKELLLKVMESHHQHKPTENLWLPRMPQKKKLRSKLKPIFPLILSDDPTSKREQ 174
           ++  +E +++  E   QH  T      ++ +  +   K++     +  +DP  K E+
Sbjct: 915 RHGFEEEIMEYKEQIKQHAQTIVSLEEKLQKVTQHHKKIEGEIATLKDNDPAPKEER 971


>gi|4504509 3 beta-hydroxysteroid dehydrogenase 2 [Homo sapiens]
          Length = 372

 Score = 28.1 bits (61), Expect = 8.7
 Identities = 10/29 (34%), Positives = 17/29 (58%)

Query: 127 KVMESHHQHKPTENLWLPRMPQKKKLRSK 155
           +++++ H+ +P EN W    P  KKL  K
Sbjct: 135 EIIQNGHEEEPLENTWPTPYPYSKKLAEK 163


>gi|31657092 ATP binding cassette, sub-family A (ABC1), member 13
            [Homo sapiens]
          Length = 5058

 Score = 28.1 bits (61), Expect = 8.7
 Identities = 16/60 (26%), Positives = 32/60 (53%)

Query: 114  ESASKYFSKELLLKVMESHHQHKPTENLWLPRMPQKKKLRSKLKPIFPLILSDDPTSKRE 173
            +S  +YF++ +L  +  S       +N+WL  +   K+ +  +K I+  IL ++ +SK E
Sbjct: 1516 QSNWRYFTELILRPIEMSDEIPNQFQNIWLHLITLGKEFQKLVKGIYFNILENNSSSKTE 1575


>gi|76443679 proprotein convertase subtilisin/kexin type 4 [Homo
           sapiens]
          Length = 755

 Score = 28.1 bits (61), Expect = 8.7
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 3/29 (10%)

Query: 138 TENLWLPRMPQKK---KLRSKLKPIFPLI 163
           T   WLP  PQ+K   +++S+  PI PLI
Sbjct: 442 TARTWLPTQPQRKCAVRVQSRPTPILPLI 470


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.313    0.127    0.360 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,116,505
Number of Sequences: 37866
Number of extensions: 423805
Number of successful extensions: 1006
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1001
Number of HSP's gapped (non-prelim): 14
length of query: 275
length of database: 18,247,518
effective HSP length: 101
effective length of query: 174
effective length of database: 14,423,052
effective search space: 2509611048
effective search space used: 2509611048
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.