Search of human proteins with 157384956

Search of human proteins with 157384956

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|157384956 nucleotide binding protein-like [Homo sapiens]
         (319 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|157384956 nucleotide binding protein-like [Homo sapiens]           628   e-180
gi|118572611 nucleotide binding protein 1 [Homo sapiens]              187   8e-48
gi|6912540 nucleotide binding protein 2 (MinD homolog, E. coli) ...   172   5e-43
gi|115511036 alpha-kinase 3 [Homo sapiens]                             32   0.75 
gi|229892270 WD repeats and SOF1 domain containing [Homo sapiens]      30   2.2  
gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens]     30   3.7  
gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens]     30   3.7  
gi|24497499 solute carrier family 22 member 8 [Homo sapiens]           29   4.9  
gi|56682953 epidermal growth factor receptor pathway substrate 8...    29   6.3  
gi|222144249 dynein heavy chain domain 1 isoform 1 [Homo sapiens]      28   8.3  
gi|124107610 killer cell immunoglobulin-like receptor, two domai...    28   8.3  
gi|222144247 dynein heavy chain domain 1 isoform 2 [Homo sapiens]      28   8.3  

>gi|157384956 nucleotide binding protein-like [Homo sapiens]
          Length = 319

 Score =  628 bits (1619), Expect = e-180
 Identities = 319/319 (100%), Positives = 319/319 (100%)

Query: 1   MGIWQRLLLFGGVSLRAGGGATAPLGGSRAMVCGRQLSGAGSETLKQRRTQIMSRGLPKQ 60
           MGIWQRLLLFGGVSLRAGGGATAPLGGSRAMVCGRQLSGAGSETLKQRRTQIMSRGLPKQ
Sbjct: 1   MGIWQRLLLFGGVSLRAGGGATAPLGGSRAMVCGRQLSGAGSETLKQRRTQIMSRGLPKQ 60

Query: 61  KPIEGVKQVIVVASGKGGVGKSTTAVNLALALAANDSSKAIGLLDVDVYGPSVPKMMNLK 120
           KPIEGVKQVIVVASGKGGVGKSTTAVNLALALAANDSSKAIGLLDVDVYGPSVPKMMNLK
Sbjct: 61  KPIEGVKQVIVVASGKGGVGKSTTAVNLALALAANDSSKAIGLLDVDVYGPSVPKMMNLK 120

Query: 121 GNPELSQSNLMRPLLNYGIACMSMGFLVEESEPVVWRGLMVMSAIEKLLRQVDWGQLDYL 180
           GNPELSQSNLMRPLLNYGIACMSMGFLVEESEPVVWRGLMVMSAIEKLLRQVDWGQLDYL
Sbjct: 121 GNPELSQSNLMRPLLNYGIACMSMGFLVEESEPVVWRGLMVMSAIEKLLRQVDWGQLDYL 180

Query: 181 VVDMPPGTGDVQLSVSQNIPITGAVIVSTPQDIALMDAHKGAEMFRRVHVPVLGLVQNMS 240
           VVDMPPGTGDVQLSVSQNIPITGAVIVSTPQDIALMDAHKGAEMFRRVHVPVLGLVQNMS
Sbjct: 181 VVDMPPGTGDVQLSVSQNIPITGAVIVSTPQDIALMDAHKGAEMFRRVHVPVLGLVQNMS 240

Query: 241 VFQCPKCKHKTHIFGADGARKLAQTLGLEVLGDIPLHLNIREASDTGQPIVFSQPESDEA 300
           VFQCPKCKHKTHIFGADGARKLAQTLGLEVLGDIPLHLNIREASDTGQPIVFSQPESDEA
Sbjct: 241 VFQCPKCKHKTHIFGADGARKLAQTLGLEVLGDIPLHLNIREASDTGQPIVFSQPESDEA 300

Query: 301 KAYLRIAVEVVRRLPSPSE 319
           KAYLRIAVEVVRRLPSPSE
Sbjct: 301 KAYLRIAVEVVRRLPSPSE 319


>gi|118572611 nucleotide binding protein 1 [Homo sapiens]
          Length = 320

 Score =  187 bits (476), Expect = 8e-48
 Identities = 119/309 (38%), Positives = 175/309 (56%), Gaps = 32/309 (10%)

Query: 11  GGVSLRAGGGATAPLGGSRAMVCGRQLSGAGS------ETLKQRRTQIMSRGLPKQKPIE 64
           G  S +AG GA+   G     +C    SGAG+      E +K++              ++
Sbjct: 10  GADSAQAGRGASCQ-GCPNQRLCA---SGAGATPDTAIEEIKEK--------------MK 51

Query: 65  GVKQVIVVASGKGGVGKSTTAVNLALALAANDSSKAIGLLDVDVYGPSVPKMMNLKGNPE 124
            VK  I+V SGKGGVGKST + +LA  LA +++++ I LLD+D+ GPS+PK+M L+G   
Sbjct: 52  TVKHKILVLSGKGGVGKSTFSAHLAHGLAEDENTQ-IALLDIDICGPSIPKIMGLEGEQV 110

Query: 125 LSQSNLMRPL-LNYGIACMSMGFLVEE-SEPVVWRGLMVMSAIEKLLRQVDWGQLDYLVV 182
               +   P+ +   +  MS+GFL+    + V+WRG      I++ LR VDWG++DYL+V
Sbjct: 111 HQSGSGWSPVYVEDNLGVMSVGFLLSSPDDAVIWRGPKKNGMIKQFLRDVDWGEVDYLIV 170

Query: 183 DMPPGTGDVQLSVSQNIP---ITGAVIVSTPQDIALMDAHKGAEMFRRVHVPVLGLVQNM 239
           D PPGT D  LSV + +    I GAVI++TPQ+++L D  K     R+V +P++G+V+NM
Sbjct: 171 DTPPGTSDEHLSVVRYLATAHIDGAVIITTPQEVSLQDVRKEINFCRKVKLPIIGVVENM 230

Query: 240 SVFQCPKCKHKTHIF--GADGARKLAQTLGLEVLGDIPLHLNIREASDTGQPIVFSQPES 297
           S F CPKCK ++ IF     GA  + Q L + +LG +PL   I +  D GQ      P+S
Sbjct: 231 SGFICPKCKKESQIFPPTTGGAELMCQDLEVPLLGRVPLDPLIGKNCDKGQSFFIDAPDS 290

Query: 298 DEAKAYLRI 306
               AY  I
Sbjct: 291 PATLAYRSI 299


>gi|6912540 nucleotide binding protein 2 (MinD homolog, E. coli)
           [Homo sapiens]
          Length = 271

 Score =  172 bits (435), Expect = 5e-43
 Identities = 98/262 (37%), Positives = 149/262 (56%), Gaps = 11/262 (4%)

Query: 63  IEGVKQVIVVASGKGGVGKSTTAVNLALALAANDSSKAIGLLDVDVYGPSVPKMMNLKGN 122
           + GV+ +I+V SGKGGVGKST +  LALAL    + K +G+LDVD+ GPS+P+M+  +G 
Sbjct: 10  LAGVRHIILVLSGKGGVGKSTISTELALAL--RHAGKKVGILDVDLCGPSIPRMLGAQGR 67

Query: 123 PELSQSNLMRPLL---NYGIACMSMGFLVEE-SEPVVWRGLMVMSAIEKLLRQVDWGQLD 178
                     P+       I+ MS+GFL+E+  E VVWRG    + I++ +  V WG+LD
Sbjct: 68  AVHQCDRGWAPVFLDREQSISLMSVGFLLEKPDEAVVWRGPKKNALIKQFVSDVAWGELD 127

Query: 179 YLVVDMPPGTGDVQLSVSQNI----PITGAVIVSTPQDIALMDAHKGAEMFRRVHVPVLG 234
           YLVVD PPGT D  ++  + +    P+ GA++V+TPQ +++ D  +     R+  + V+G
Sbjct: 128 YLVVDTPPGTSDEHMATIEALRPYQPL-GALVVTTPQAVSVGDVRRELTFCRKTGLRVMG 186

Query: 235 LVQNMSVFQCPKCKHKTHIFGADGARKLAQTLGLEVLGDIPLHLNIREASDTGQPIVFSQ 294
           +V+NMS F CP C   T +F   G  +LAQ  G+  LG +PL   +    + G   +   
Sbjct: 187 IVENMSGFTCPHCTECTSVFSRGGGEELAQLAGVPFLGSVPLDPALMRTLEEGHDFIQEF 246

Query: 295 PESDEAKAYLRIAVEVVRRLPS 316
           P S    A   IA +++   P+
Sbjct: 247 PGSPAFAALTSIAQKILDATPA 268


>gi|115511036 alpha-kinase 3 [Homo sapiens]
          Length = 1907

 Score = 32.0 bits (71), Expect = 0.75
 Identities = 37/161 (22%), Positives = 60/161 (37%), Gaps = 18/161 (11%)

Query: 12  GVSLRAGGGATAPLGGSRAMVCGRQLSGAGSETLKQRRTQIMSRGLPKQK---------P 62
           G    AG  A AP G S+    GR   G G + +   R   ++RG  + +         P
Sbjct: 120 GAGPGAGTWAPAPPGVSKPRCPGRARPGEGQQQVTTARPPAINRGARQPRAGAAAAGRGP 179

Query: 63  IEGVKQVIVVAS------GKGGVGKSTTAVNLALALAANDSSKAIGLLDVDVYGPSVPK- 115
             G  +    A+      G+GG   S  A +          +   G  D  V+ PS    
Sbjct: 180 GAGAWRTGEAAASAGPAVGEGGAMGSRRAPSRGWGAGGRSGAGGDGEDDGPVWIPSPASR 239

Query: 116 --MMNLKGNPELSQSNLMRPLLNYGIACMSMGFLVEESEPV 154
             +++++    LS + L  P       C  +  L EE++P+
Sbjct: 240 SYLLSVRPETSLSSNRLSHPSSGRSTFCSIIAQLTEETQPL 280


>gi|229892270 WD repeats and SOF1 domain containing [Homo sapiens]
          Length = 597

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 16/48 (33%), Positives = 25/48 (52%)

Query: 21 ATAPLGGSRAMVCGRQLSGAGSETLKQRRTQIMSRGLPKQKPIEGVKQ 68
          AT P G +R ++C R++S AG  + +  RT       P +  +EG  Q
Sbjct: 15 ATPPPGPTRGLLCPRRVSEAGDSSTEGARTGHRHYVTPAESAMEGRSQ 62


>gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens]
          Length = 1512

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 4/57 (7%)

Query: 8   LLFGGVSLRAGG---GATAPLGGSRAMVCGRQLSGAGSETLKQRRTQIMSRGLPKQK 61
           LL GG S        G T   GGS A   G Q  G GSE  + RR +  S G  K++
Sbjct: 157 LLLGGASAATAATAAGGTGGSGGSPASSSGTQRRGEGSER-RPRRDRRSSSGRSKER 212


>gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens]
          Length = 1452

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 4/57 (7%)

Query: 8   LLFGGVSLRAGG---GATAPLGGSRAMVCGRQLSGAGSETLKQRRTQIMSRGLPKQK 61
           LL GG S        G T   GGS A   G Q  G GSE  + RR +  S G  K++
Sbjct: 157 LLLGGASAATAATAAGGTGGSGGSPASSSGTQRRGEGSER-RPRRDRRSSSGRSKER 212


>gi|24497499 solute carrier family 22 member 8 [Homo sapiens]
          Length = 542

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 1/64 (1%)

Query: 20  GATAPLGGSRAMVCGRQLSGAGSETLKQRRTQIMSRGLPKQKP-IEGVKQVIVVASGKGG 78
           G TA LGGS A+     L+    ET++      +    PKQ+P +E   Q I +     G
Sbjct: 479 GITALLGGSAALFLPETLNQPLPETIEDLENWSLRAKKPKQEPEVEKASQRIPLQPHGPG 538

Query: 79  VGKS 82
           +G S
Sbjct: 539 LGSS 542


>gi|56682953 epidermal growth factor receptor pathway substrate 8
           [Homo sapiens]
          Length = 822

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 5/68 (7%)

Query: 197 QNIPITGAVIVSTPQDIALMDAHKGAEMFRRVHVPVLGLVQNMSVFQCPKCKHKTHIFGA 256
           QN+P+      STP+D+      KG   F  V V  LG++    +F   K + +T     
Sbjct: 714 QNVPVINITYDSTPEDVKTWLQSKG---FNPVTVNSLGVLNGAQLFSLNKDELRT--VCP 768

Query: 257 DGARKLAQ 264
           +GAR  +Q
Sbjct: 769 EGARVYSQ 776


>gi|222144249 dynein heavy chain domain 1 isoform 1 [Homo sapiens]
          Length = 4753

 Score = 28.5 bits (62), Expect = 8.3
 Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 3/86 (3%)

Query: 147 LVEESEPVVWRGLMVMSAIEKLLRQVDWGQLDYLVVDMPPGTGDVQLSVSQNIPITGAVI 206
           ++++S P  WR L  +  +    R++  G LD L            +    ++ + GA++
Sbjct: 72  VLQDSSPAAWRYLHAVLGLLPPYRELLVGHLDLLPFLEQLYCWAPWVQTHLHLDLLGAIV 131

Query: 207 VSTPQDIALMDAHKGAE---MFRRVH 229
            + P D +L+D+   A+     RR+H
Sbjct: 132 QAFPPDSSLLDSASHADCCPQKRRLH 157


>gi|124107610 killer cell immunoglobulin-like receptor, two domains,
           long cytoplasmic tail, 4 isoform c [Homo sapiens]
          Length = 342

 Score = 28.5 bits (62), Expect = 8.3
 Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 7/110 (6%)

Query: 111 PSVPKMMNLKGNPELSQSNLMRPLLNYGIACMSMGFLVEESEPVVWRGLMVMSAIEKLLR 170
           PS P  +++ GNP  S  +   P      A M+        EP   R +    + E+  +
Sbjct: 209 PSDPLPVSVTGNPSSSWPSPTEPSFKTDAAVMNQ-------EPAGHRTVNREDSDEQDPQ 261

Query: 171 QVDWGQLDYLVVDMPPGTGDVQLSVSQNIPITGAVIVSTPQDIALMDAHK 220
           +V + QLD+ +      TG  Q S   +   +  + +   +  AL  AH+
Sbjct: 262 EVTYAQLDHCIFTQRKITGPSQRSKRPSTDTSVCIELPNAEPRALSPAHE 311


>gi|222144247 dynein heavy chain domain 1 isoform 2 [Homo sapiens]
          Length = 597

 Score = 28.5 bits (62), Expect = 8.3
 Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 3/86 (3%)

Query: 147 LVEESEPVVWRGLMVMSAIEKLLRQVDWGQLDYLVVDMPPGTGDVQLSVSQNIPITGAVI 206
           ++++S P  WR L  +  +    R++  G LD L            +    ++ + GA++
Sbjct: 72  VLQDSSPAAWRYLHAVLGLLPPYRELLVGHLDLLPFLEQLYCWAPWVQTHLHLDLLGAIV 131

Query: 207 VSTPQDIALMDAHKGAE---MFRRVH 229
            + P D +L+D+   A+     RR+H
Sbjct: 132 QAFPPDSSLLDSASHADCCPQKRRLH 157


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.136    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,056,869
Number of Sequences: 37866
Number of extensions: 528387
Number of successful extensions: 1411
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1397
Number of HSP's gapped (non-prelim): 13
length of query: 319
length of database: 18,247,518
effective HSP length: 102
effective length of query: 217
effective length of database: 14,385,186
effective search space: 3121585362
effective search space used: 3121585362
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.