Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 157266296

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|157266296 placental-like alkaline phosphatase preproprotein
[Homo sapiens]
         (532 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|157266296 placental-like alkaline phosphatase preproprotein [...  1072   0.0  
gi|94721246 placental alkaline phosphatase preproprotein [Homo s...  1026   0.0  
gi|157266292 intestinal alkaline phosphatase precursor [Homo sap...   930   0.0  
gi|116734717 tissue-nonspecific alkaline phosphatase precursor [...   557   e-159
gi|188595718 tissue-nonspecific alkaline phosphatase precursor [...   557   e-159
gi|66346693 FAT tumor suppressor 1 precursor [Homo sapiens]            30   4.2  
gi|28376656 zinc finger, X-linked, duplicated B [Homo sapiens]         29   9.4  

>gi|157266296 placental-like alkaline phosphatase preproprotein
           [Homo sapiens]
          Length = 532

 Score = 1072 bits (2772), Expect = 0.0
 Identities = 532/532 (100%), Positives = 532/532 (100%)

Query: 1   MQGPWVLLLLGLRLQLSLGIIPVEEENPDFWNRQAAEALGAAKKLQPAQTAAKNLIIFLG 60
           MQGPWVLLLLGLRLQLSLGIIPVEEENPDFWNRQAAEALGAAKKLQPAQTAAKNLIIFLG
Sbjct: 1   MQGPWVLLLLGLRLQLSLGIIPVEEENPDFWNRQAAEALGAAKKLQPAQTAAKNLIIFLG 60

Query: 61  DGMGVSTVTAARILKGQKKDKLGPETFLAMDRFPYVALSKTYSVDKHVPDSGATATAYLC 120
           DGMGVSTVTAARILKGQKKDKLGPETFLAMDRFPYVALSKTYSVDKHVPDSGATATAYLC
Sbjct: 61  DGMGVSTVTAARILKGQKKDKLGPETFLAMDRFPYVALSKTYSVDKHVPDSGATATAYLC 120

Query: 121 GVKGNFQTIGLSAAARFNQCNTTRGNEVISVMNRAKKAGKSVGVVTTTRVQHASPAGAYA 180
           GVKGNFQTIGLSAAARFNQCNTTRGNEVISVMNRAKKAGKSVGVVTTTRVQHASPAGAYA
Sbjct: 121 GVKGNFQTIGLSAAARFNQCNTTRGNEVISVMNRAKKAGKSVGVVTTTRVQHASPAGAYA 180

Query: 181 HTVNRNWYSDADVPASARQEGCQDIATQLISNMDIDVILGGGRKYMFPMGTPDPEYPDDY 240
           HTVNRNWYSDADVPASARQEGCQDIATQLISNMDIDVILGGGRKYMFPMGTPDPEYPDDY
Sbjct: 181 HTVNRNWYSDADVPASARQEGCQDIATQLISNMDIDVILGGGRKYMFPMGTPDPEYPDDY 240

Query: 241 SQGGTRLDGKNLVQEWLAKHQGARYVWNRTELLQASLDPSVTHLMGLFEPGDMKYEIHRD 300
           SQGGTRLDGKNLVQEWLAKHQGARYVWNRTELLQASLDPSVTHLMGLFEPGDMKYEIHRD
Sbjct: 241 SQGGTRLDGKNLVQEWLAKHQGARYVWNRTELLQASLDPSVTHLMGLFEPGDMKYEIHRD 300

Query: 301 STLDPSLMEMTEAALLLLSRNPRGFFLFVEGGRIDHGHHESRAYRALTETIMFDDAIERA 360
           STLDPSLMEMTEAALLLLSRNPRGFFLFVEGGRIDHGHHESRAYRALTETIMFDDAIERA
Sbjct: 301 STLDPSLMEMTEAALLLLSRNPRGFFLFVEGGRIDHGHHESRAYRALTETIMFDDAIERA 360

Query: 361 GQLTSEEDTLSLVTADHSHVFSFGGYPLRGSSIFGLAPGKARDRKAYTVLLYGNGPGYVL 420
           GQLTSEEDTLSLVTADHSHVFSFGGYPLRGSSIFGLAPGKARDRKAYTVLLYGNGPGYVL
Sbjct: 361 GQLTSEEDTLSLVTADHSHVFSFGGYPLRGSSIFGLAPGKARDRKAYTVLLYGNGPGYVL 420

Query: 421 KDGARPDVTESESGSPEYRQQSAVPLDGETHAGEDVAVFARGPQAHLVHGVQEQTFIAHV 480
           KDGARPDVTESESGSPEYRQQSAVPLDGETHAGEDVAVFARGPQAHLVHGVQEQTFIAHV
Sbjct: 421 KDGARPDVTESESGSPEYRQQSAVPLDGETHAGEDVAVFARGPQAHLVHGVQEQTFIAHV 480

Query: 481 MAFAACLEPYTACDLAPRAGTTDAAHPGPSVVPALLPLLAGTLLLLGTATAP 532
           MAFAACLEPYTACDLAPRAGTTDAAHPGPSVVPALLPLLAGTLLLLGTATAP
Sbjct: 481 MAFAACLEPYTACDLAPRAGTTDAAHPGPSVVPALLPLLAGTLLLLGTATAP 532


>gi|94721246 placental alkaline phosphatase preproprotein [Homo
           sapiens]
          Length = 535

 Score = 1026 bits (2652), Expect = 0.0
 Identities = 513/527 (97%), Positives = 517/527 (98%)

Query: 6   VLLLLGLRLQLSLGIIPVEEENPDFWNRQAAEALGAAKKLQPAQTAAKNLIIFLGDGMGV 65
           +LLLLGLRLQLSLGIIPVEEENPDFWNR+AAEALGAAKKLQPAQTAAKNLIIFLGDGMGV
Sbjct: 9   LLLLLGLRLQLSLGIIPVEEENPDFWNREAAEALGAAKKLQPAQTAAKNLIIFLGDGMGV 68

Query: 66  STVTAARILKGQKKDKLGPETFLAMDRFPYVALSKTYSVDKHVPDSGATATAYLCGVKGN 125
           STVTAARILKGQKKDKLGPE  LAMDRFPYVALSKTY+VDKHVPDSGATATAYLCGVKGN
Sbjct: 69  STVTAARILKGQKKDKLGPEIPLAMDRFPYVALSKTYNVDKHVPDSGATATAYLCGVKGN 128

Query: 126 FQTIGLSAAARFNQCNTTRGNEVISVMNRAKKAGKSVGVVTTTRVQHASPAGAYAHTVNR 185
           FQTIGLSAAARFNQCNTTRGNEVISVMNRAKKAGKSVGVVTTTRVQHASPAG YAHTVNR
Sbjct: 129 FQTIGLSAAARFNQCNTTRGNEVISVMNRAKKAGKSVGVVTTTRVQHASPAGTYAHTVNR 188

Query: 186 NWYSDADVPASARQEGCQDIATQLISNMDIDVILGGGRKYMFPMGTPDPEYPDDYSQGGT 245
           NWYSDADVPASARQEGCQDIATQLISNMDIDVILGGGRKYMF MGTPDPEYPDDYSQGGT
Sbjct: 189 NWYSDADVPASARQEGCQDIATQLISNMDIDVILGGGRKYMFRMGTPDPEYPDDYSQGGT 248

Query: 246 RLDGKNLVQEWLAKHQGARYVWNRTELLQASLDPSVTHLMGLFEPGDMKYEIHRDSTLDP 305
           RLDGKNLVQEWLAK QGARYVWNRTEL+QASLDPSVTHLMGLFEPGDMKYEIHRDSTLDP
Sbjct: 249 RLDGKNLVQEWLAKRQGARYVWNRTELMQASLDPSVTHLMGLFEPGDMKYEIHRDSTLDP 308

Query: 306 SLMEMTEAALLLLSRNPRGFFLFVEGGRIDHGHHESRAYRALTETIMFDDAIERAGQLTS 365
           SLMEMTEAAL LLSRNPRGFFLFVEGGRIDHGHHESRAYRALTETIMFDDAIERAGQLTS
Sbjct: 309 SLMEMTEAALRLLSRNPRGFFLFVEGGRIDHGHHESRAYRALTETIMFDDAIERAGQLTS 368

Query: 366 EEDTLSLVTADHSHVFSFGGYPLRGSSIFGLAPGKARDRKAYTVLLYGNGPGYVLKDGAR 425
           EEDTLSLVTADHSHVFSFGGYPLRGSSIFGLAPGKARDRKAYTVLLYGNGPGYVLKDGAR
Sbjct: 369 EEDTLSLVTADHSHVFSFGGYPLRGSSIFGLAPGKARDRKAYTVLLYGNGPGYVLKDGAR 428

Query: 426 PDVTESESGSPEYRQQSAVPLDGETHAGEDVAVFARGPQAHLVHGVQEQTFIAHVMAFAA 485
           PDVTESESGSPEYRQQSAVPLD ETHAGEDVAVFARGPQAHLVHGVQEQTFIAHVMAFAA
Sbjct: 429 PDVTESESGSPEYRQQSAVPLDEETHAGEDVAVFARGPQAHLVHGVQEQTFIAHVMAFAA 488

Query: 486 CLEPYTACDLAPRAGTTDAAHPGPSVVPALLPLLAGTLLLLGTATAP 532
           CLEPYTACDLAP AGTTDAAHPG SVVPALLPLLAGTLLLL TATAP
Sbjct: 489 CLEPYTACDLAPPAGTTDAAHPGRSVVPALLPLLAGTLLLLETATAP 535


>gi|157266292 intestinal alkaline phosphatase precursor [Homo
           sapiens]
          Length = 528

 Score =  930 bits (2403), Expect = 0.0
 Identities = 462/532 (86%), Positives = 483/532 (90%), Gaps = 4/532 (0%)

Query: 1   MQGPWVLLLLGLRLQLSLGIIPVEEENPDFWNRQAAEALGAAKKLQPAQTAAKNLIIFLG 60
           MQGPWVLLLLGLRLQLSLG+IP EEENP FWNRQAAEAL AAKKLQP Q  AKNLI+FLG
Sbjct: 1   MQGPWVLLLLGLRLQLSLGVIPAEEENPAFWNRQAAEALDAAKKLQPIQKVAKNLILFLG 60

Query: 61  DGMGVSTVTAARILKGQKKDKLGPETFLAMDRFPYVALSKTYSVDKHVPDSGATATAYLC 120
           DG+GV TVTA RILKGQK  KLGPET LAMDRFPY+ALSKTY+VD+ VPDS ATATAYLC
Sbjct: 61  DGLGVPTVTATRILKGQKNGKLGPETPLAMDRFPYLALSKTYNVDRQVPDSAATATAYLC 120

Query: 121 GVKGNFQTIGLSAAARFNQCNTTRGNEVISVMNRAKKAGKSVGVVTTTRVQHASPAGAYA 180
           GVK NFQTIGLSAAARFNQCNTTRGNEVISVMNRAK+AGKSVGVVTTTRVQHASPAG YA
Sbjct: 121 GVKANFQTIGLSAAARFNQCNTTRGNEVISVMNRAKQAGKSVGVVTTTRVQHASPAGTYA 180

Query: 181 HTVNRNWYSDADVPASARQEGCQDIATQLISNMDIDVILGGGRKYMFPMGTPDPEYPDDY 240
           HTVNRNWYSDAD+PASARQEGCQDIATQLISNMDIDVILGGGRKYMFPMGTPDPEYP D 
Sbjct: 181 HTVNRNWYSDADMPASARQEGCQDIATQLISNMDIDVILGGGRKYMFPMGTPDPEYPADA 240

Query: 241 SQGGTRLDGKNLVQEWLAKHQGARYVWNRTELLQASLDPSVTHLMGLFEPGDMKYEIHRD 300
           SQ G RLDGKNLVQEWLAKHQGA YVWNRTEL+QASLD SVTHLMGLFEPGD KYEIHRD
Sbjct: 241 SQNGIRLDGKNLVQEWLAKHQGAWYVWNRTELMQASLDQSVTHLMGLFEPGDTKYEIHRD 300

Query: 301 STLDPSLMEMTEAALLLLSRNPRGFFLFVEGGRIDHGHHESRAYRALTETIMFDDAIERA 360
            TLDPSLMEMTEAAL LLSRNPRGF+LFVEGGRIDHGHHE  AY+ALTE +MFDDAIERA
Sbjct: 301 PTLDPSLMEMTEAALRLLSRNPRGFYLFVEGGRIDHGHHEGVAYQALTEAVMFDDAIERA 360

Query: 361 GQLTSEEDTLSLVTADHSHVFSFGGYPLRGSSIFGLAPGKARDRKAYTVLLYGNGPGYVL 420
           GQLTSEEDTL+LVTADHSHVFSFGGY LRGSSIFGLAP KA+D KAYT +LYGNGPGYV 
Sbjct: 361 GQLTSEEDTLTLVTADHSHVFSFGGYTLRGSSIFGLAPSKAQDSKAYTSILYGNGPGYVF 420

Query: 421 KDGARPDVTESESGSPEYRQQSAVPLDGETHAGEDVAVFARGPQAHLVHGVQEQTFIAHV 480
             G RPDV ESESGSP+Y+QQ+AVPL  ETH GEDVAVFARGPQAHLVHGVQEQ+F+AHV
Sbjct: 421 NSGVRPDVNESESGSPDYQQQAAVPLSSETHGGEDVAVFARGPQAHLVHGVQEQSFVAHV 480

Query: 481 MAFAACLEPYTACDLAPRAGTTDAAHPGPSVVPALLPLLAGTLLLLGTATAP 532
           MAFAACLEPYTACDLAP A TTDAAHP    V A LPLLAGTLLLLG + AP
Sbjct: 481 MAFAACLEPYTACDLAPPACTTDAAHP----VAASLPLLAGTLLLLGASAAP 528


>gi|116734717 tissue-nonspecific alkaline phosphatase precursor
           [Homo sapiens]
          Length = 524

 Score =  557 bits (1436), Expect = e-159
 Identities = 295/527 (55%), Positives = 380/527 (72%), Gaps = 16/527 (3%)

Query: 1   MQGPWVLLLLGLRLQLSLGIIPVEEENPDFWNRQAAEALGAAKKLQPAQT-AAKNLIIFL 59
           M  P+++L +G  L  SL  +P +E++P +W  QA E L  A +LQ   T  AKN+I+FL
Sbjct: 1   MISPFLVLAIGTCLTNSL--VPEKEKDPKYWRDQAQETLKYALELQKLNTNVAKNVIMFL 58

Query: 60  GDGMGVSTVTAARILKGQKKDKLGPETFLAMDRFPYVALSKTYSVDKHVPDSGATATAYL 119
           GDGMGVSTVTAARILKGQ     G ET L MD+FP+VALSKTY+ +  VPDS  TATAYL
Sbjct: 59  GDGMGVSTVTAARILKGQLHHNPGEETRLEMDKFPFVALSKTYNTNAQVPDSAGTATAYL 118

Query: 120 CGVKGNFQTIGLSAAARFNQCNTTRGNEVISVMNRAKKAGKSVGVVTTTRVQHASPAGAY 179
           CGVK N  T+G+SAA   ++CNTT+GNEV S++  AK AGKSVG+VTTTRV HA+P+ AY
Sbjct: 119 CGVKANEGTVGVSAATERSRCNTTQGNEVTSILRWAKDAGKSVGIVTTTRVNHATPSAAY 178

Query: 180 AHTVNRNWYSDADVPASARQEGCQDIATQLISNM-DIDVILGGGRKYMFPMGTPDPEYPD 238
           AH+ +R+WYSD ++P  A  +GC+DIA QL+ N+ DIDVI+GGGRKYM+P    D EY  
Sbjct: 179 AHSADRDWYSDNEMPPEALSQGCKDIAYQLMHNIRDIDVIMGGGRKYMYPKNKTDVEYES 238

Query: 239 DYSQGGTRLDGKNLVQEWLA---KHQGARYVWNRTELLQASLDP-SVTHLMGLFEPGDMK 294
           D    GTRLDG +LV  W +   +++ + ++WNRTELL  +LDP +V +L+GLFEPGDM+
Sbjct: 239 DEKARGTRLDGLDLVDTWKSFKPRYKHSHFIWNRTELL--TLDPHNVDYLLGLFEPGDMQ 296

Query: 295 YEIHRDSTLDPSLMEMTEAALLLLSRNPRGFFLFVEGGRIDHGHHESRAYRALTETIMFD 354
           YE++R++  DPSL EM   A+ +L +NP+GFFL VEGGRIDHGHHE +A +AL E +  D
Sbjct: 297 YELNRNNVTDPSLSEMVVVAIQILRKNPKGFFLLVEGGRIDHGHHEGKAKQALHEAVEMD 356

Query: 355 DAIERAGQLTSEEDTLSLVTADHSHVFSFGGYPLRGSSIFGLAPGKA-RDRKAYTVLLYG 413
            AI +AG LTS EDTL++VTADHSHVF+FGGY  RG+SIFGLAP  +  D+K +T +LYG
Sbjct: 357 RAIGQAGSLTSSEDTLTVVTADHSHVFTFGGYTPRGNSIFGLAPMLSDTDKKPFTAILYG 416

Query: 414 NGPGYVLKDGARPDVTESESGSPEYRQQSAVPLDGETHAGEDVAVFARGPQAHLVHGVQE 473
           NGPGY +  G R +V+  +     Y+ QSAVPL  ETH GEDVAVF++GP AHL+HGV E
Sbjct: 417 NGPGYKVVGGERENVSMVDYAHNNYQAQSAVPLRHETHGGEDVAVFSKGPMAHLLHGVHE 476

Query: 474 QTFIAHVMAFAACLEPYTA-CDLAPRAGTTDAAHPGPSVVP-ALLPL 518
           Q ++ HVMA+AAC+      C  A  AG+  A   GP ++  AL PL
Sbjct: 477 QNYVPHVMAYAACIGANLGHCAPASSAGSLAA---GPLLLALALYPL 520


>gi|188595718 tissue-nonspecific alkaline phosphatase precursor
           [Homo sapiens]
          Length = 524

 Score =  557 bits (1436), Expect = e-159
 Identities = 295/527 (55%), Positives = 380/527 (72%), Gaps = 16/527 (3%)

Query: 1   MQGPWVLLLLGLRLQLSLGIIPVEEENPDFWNRQAAEALGAAKKLQPAQT-AAKNLIIFL 59
           M  P+++L +G  L  SL  +P +E++P +W  QA E L  A +LQ   T  AKN+I+FL
Sbjct: 1   MISPFLVLAIGTCLTNSL--VPEKEKDPKYWRDQAQETLKYALELQKLNTNVAKNVIMFL 58

Query: 60  GDGMGVSTVTAARILKGQKKDKLGPETFLAMDRFPYVALSKTYSVDKHVPDSGATATAYL 119
           GDGMGVSTVTAARILKGQ     G ET L MD+FP+VALSKTY+ +  VPDS  TATAYL
Sbjct: 59  GDGMGVSTVTAARILKGQLHHNPGEETRLEMDKFPFVALSKTYNTNAQVPDSAGTATAYL 118

Query: 120 CGVKGNFQTIGLSAAARFNQCNTTRGNEVISVMNRAKKAGKSVGVVTTTRVQHASPAGAY 179
           CGVK N  T+G+SAA   ++CNTT+GNEV S++  AK AGKSVG+VTTTRV HA+P+ AY
Sbjct: 119 CGVKANEGTVGVSAATERSRCNTTQGNEVTSILRWAKDAGKSVGIVTTTRVNHATPSAAY 178

Query: 180 AHTVNRNWYSDADVPASARQEGCQDIATQLISNM-DIDVILGGGRKYMFPMGTPDPEYPD 238
           AH+ +R+WYSD ++P  A  +GC+DIA QL+ N+ DIDVI+GGGRKYM+P    D EY  
Sbjct: 179 AHSADRDWYSDNEMPPEALSQGCKDIAYQLMHNIRDIDVIMGGGRKYMYPKNKTDVEYES 238

Query: 239 DYSQGGTRLDGKNLVQEWLA---KHQGARYVWNRTELLQASLDP-SVTHLMGLFEPGDMK 294
           D    GTRLDG +LV  W +   +++ + ++WNRTELL  +LDP +V +L+GLFEPGDM+
Sbjct: 239 DEKARGTRLDGLDLVDTWKSFKPRYKHSHFIWNRTELL--TLDPHNVDYLLGLFEPGDMQ 296

Query: 295 YEIHRDSTLDPSLMEMTEAALLLLSRNPRGFFLFVEGGRIDHGHHESRAYRALTETIMFD 354
           YE++R++  DPSL EM   A+ +L +NP+GFFL VEGGRIDHGHHE +A +AL E +  D
Sbjct: 297 YELNRNNVTDPSLSEMVVVAIQILRKNPKGFFLLVEGGRIDHGHHEGKAKQALHEAVEMD 356

Query: 355 DAIERAGQLTSEEDTLSLVTADHSHVFSFGGYPLRGSSIFGLAPGKA-RDRKAYTVLLYG 413
            AI +AG LTS EDTL++VTADHSHVF+FGGY  RG+SIFGLAP  +  D+K +T +LYG
Sbjct: 357 RAIGQAGSLTSSEDTLTVVTADHSHVFTFGGYTPRGNSIFGLAPMLSDTDKKPFTAILYG 416

Query: 414 NGPGYVLKDGARPDVTESESGSPEYRQQSAVPLDGETHAGEDVAVFARGPQAHLVHGVQE 473
           NGPGY +  G R +V+  +     Y+ QSAVPL  ETH GEDVAVF++GP AHL+HGV E
Sbjct: 417 NGPGYKVVGGERENVSMVDYAHNNYQAQSAVPLRHETHGGEDVAVFSKGPMAHLLHGVHE 476

Query: 474 QTFIAHVMAFAACLEPYTA-CDLAPRAGTTDAAHPGPSVVP-ALLPL 518
           Q ++ HVMA+AAC+      C  A  AG+  A   GP ++  AL PL
Sbjct: 477 QNYVPHVMAYAACIGANLGHCAPASSAGSLAA---GPLLLALALYPL 520


>gi|66346693 FAT tumor suppressor 1 precursor [Homo sapiens]
          Length = 4588

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 3/71 (4%)

Query: 104  VDKHVPD---SGATATAYLCGVKGNFQTIGLSAAARFNQCNTTRGNEVISVMNRAKKAGK 160
            ++ H PD   SG    + L   +GNF    LS A R  Q       +V ++  RAK  GK
Sbjct: 949  LEAHDPDLGQSGQVRYSLLDHGEGNFDVDKLSGAVRIVQQLDFEKKQVYNLTVRAKDKGK 1008

Query: 161  SVGVVTTTRVQ 171
             V + +T  V+
Sbjct: 1009 PVSLSSTCYVE 1019


>gi|28376656 zinc finger, X-linked, duplicated B [Homo sapiens]
          Length = 803

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 38/123 (30%), Positives = 46/123 (37%), Gaps = 19/123 (15%)

Query: 413 GNGPGYVLKDGAR--PDVTESESGSPEY-------RQQSAVPLDGETHAGEDVAVFARGP 463
           G   G VL++ A   P +   ESG+          R  SAVP      A    A FA   
Sbjct: 110 GQAAGPVLREEAEEGPGLQGGESGANPAGPTALGPRCLSAVPTPAPISAPGPAAAFAGTV 169

Query: 464 QAH-------LVHGVQE-QTFIAHVMAFAACLEPYTACDLAPRAGTTDAAHPG--PSVVP 513
             H         +GV    T   H     A       C +AP+AG   AAHPG  P + P
Sbjct: 170 TIHNQDLLLRFENGVLTLATPPPHAWEPGAAPAQQPGCLIAPQAGFPHAAHPGDCPELPP 229

Query: 514 ALL 516
            LL
Sbjct: 230 DLL 232


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.134    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,230,564
Number of Sequences: 37866
Number of extensions: 989153
Number of successful extensions: 1992
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1975
Number of HSP's gapped (non-prelim): 7
length of query: 532
length of database: 18,247,518
effective HSP length: 107
effective length of query: 425
effective length of database: 14,195,856
effective search space: 6033238800
effective search space used: 6033238800
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press