Guide to the Human Genome
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Name: ALPP Sequence: fasta or formatted (535aa) NCBI GI: 94721246
Description:

placental alkaline phosphatase preproprotein

Referenced in:

Proteins Measured in Common Diagnostic Tests
Ovary, Uterus and Placenta
Phosphatases and Sulfatases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.0         59           3
 C cysteine            1.1          6           1
 D aspartate           5.8         31           2
 E glutamate           5.6         30           3
 F phenylalanine       3.2         17           2
 G glycine             9.2         49           3
 H histidine           2.8         15           2
 I isoleucine          3.4         18           2
 K lysine              3.7         20           2
 L leucine            10.8         58           7
 M methionine          2.8         15           1
 N asparagine          3.0         16           1
 P proline             5.8         31           2
 Q glutamine           3.7         20           2
 R arginine            5.8         31           1
 S serine              5.4         29           2
 T threonine           6.7         36           3
 V valine              6.2         33           2
 W tryptophan          0.7          4           1
 Y tyrosine            3.2         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   placental alkaline phosphatase preproprotein 
ALPPL2                0.953   placental-like alkaline phosphatase preproprotein [...
ALPI                  0.850   intestinal alkaline phosphatase precursor 
ALPL                  0.498   tissue-nonspecific alkaline phosphatase precursor [...
ALPL                  0.498   tissue-nonspecific alkaline phosphatase precursor [...
FAT1                  0.008   FAT tumor suppressor 1 precursor 
DCHS1                 0.005   dachsous 1 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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