Guide to the Human Genome
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Search of human proteins with 156416020

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|156416020 transmembrane protein 176B isoform a [Homo
sapiens]
         (270 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|156416020 transmembrane protein 176B isoform a [Homo sapiens]      539   e-154
gi|156416018 transmembrane protein 176B isoform a [Homo sapiens]      539   e-154
gi|156416016 transmembrane protein 176B isoform a [Homo sapiens]      539   e-154
gi|156416014 transmembrane protein 176B isoform a [Homo sapiens]      539   e-154
gi|156416022 transmembrane protein 176B isoform b [Homo sapiens]      446   e-125
gi|32484987 hepatocellular carcinoma-associated antigen 112 [Hom...   106   2e-23
gi|38146116 hypothetical protein LOC10712 isoform a [Homo sapiens]     39   0.006
gi|166795252 hypothetical protein LOC23359 [Homo sapiens]              35   0.069
gi|122114658 hypothetical protein LOC23053 [Homo sapiens]              31   1.00 
gi|23110997 membrane-spanning 4-domains, subfamily A, member 5 [...    31   1.00 
gi|8923206 membrane-spanning 4-domains, subfamily A, member 12 [...    31   1.3  
gi|90903231 huntingtin [Homo sapiens]                                  30   2.2  
gi|149588599 membrane-spanning 4-domains, subfamily A, member 15...    29   3.8  
gi|7662302 TBK1 binding protein 1 [Homo sapiens]                       28   6.5  
gi|119226217 membrane-spanning 4-domains, subfamily A, member 14...    28   6.5  
gi|45505130 TAO kinase 2 isoform 2 [Homo sapiens]                      28   8.4  

>gi|156416020 transmembrane protein 176B isoform a [Homo sapiens]
          Length = 270

 Score =  539 bits (1389), Expect = e-154
 Identities = 270/270 (100%), Positives = 270/270 (100%)

Query: 1   MTQNTVIVNGVAMASRPSQPTHVNVHIHQESALTQLLKAGGSLKKFLFHPGDTVPSTARI 60
           MTQNTVIVNGVAMASRPSQPTHVNVHIHQESALTQLLKAGGSLKKFLFHPGDTVPSTARI
Sbjct: 1   MTQNTVIVNGVAMASRPSQPTHVNVHIHQESALTQLLKAGGSLKKFLFHPGDTVPSTARI 60

Query: 61  GYEQLALGVTQILLGVVSCVLGVCLSLGPWTVLSASGCAFWAGSVVIAAGAGAIVHEKHP 120
           GYEQLALGVTQILLGVVSCVLGVCLSLGPWTVLSASGCAFWAGSVVIAAGAGAIVHEKHP
Sbjct: 61  GYEQLALGVTQILLGVVSCVLGVCLSLGPWTVLSASGCAFWAGSVVIAAGAGAIVHEKHP 120

Query: 121 GKLAGYISSLLTLAGFATAMAAVVLCVNSFIWQTEPFLYIDTVCDRSDPVFPTTGYRWMR 180
           GKLAGYISSLLTLAGFATAMAAVVLCVNSFIWQTEPFLYIDTVCDRSDPVFPTTGYRWMR
Sbjct: 121 GKLAGYISSLLTLAGFATAMAAVVLCVNSFIWQTEPFLYIDTVCDRSDPVFPTTGYRWMR 180

Query: 181 RSQENQWQKEECRAYMQMLRKLFTAIRALFLAVCVLKVIVSLVSLGVGLRNLCGQSSQPL 240
           RSQENQWQKEECRAYMQMLRKLFTAIRALFLAVCVLKVIVSLVSLGVGLRNLCGQSSQPL
Sbjct: 181 RSQENQWQKEECRAYMQMLRKLFTAIRALFLAVCVLKVIVSLVSLGVGLRNLCGQSSQPL 240

Query: 241 NEEGSEKRLLGENSVPPSPSREQTSTAIVL 270
           NEEGSEKRLLGENSVPPSPSREQTSTAIVL
Sbjct: 241 NEEGSEKRLLGENSVPPSPSREQTSTAIVL 270


>gi|156416018 transmembrane protein 176B isoform a [Homo sapiens]
          Length = 270

 Score =  539 bits (1389), Expect = e-154
 Identities = 270/270 (100%), Positives = 270/270 (100%)

Query: 1   MTQNTVIVNGVAMASRPSQPTHVNVHIHQESALTQLLKAGGSLKKFLFHPGDTVPSTARI 60
           MTQNTVIVNGVAMASRPSQPTHVNVHIHQESALTQLLKAGGSLKKFLFHPGDTVPSTARI
Sbjct: 1   MTQNTVIVNGVAMASRPSQPTHVNVHIHQESALTQLLKAGGSLKKFLFHPGDTVPSTARI 60

Query: 61  GYEQLALGVTQILLGVVSCVLGVCLSLGPWTVLSASGCAFWAGSVVIAAGAGAIVHEKHP 120
           GYEQLALGVTQILLGVVSCVLGVCLSLGPWTVLSASGCAFWAGSVVIAAGAGAIVHEKHP
Sbjct: 61  GYEQLALGVTQILLGVVSCVLGVCLSLGPWTVLSASGCAFWAGSVVIAAGAGAIVHEKHP 120

Query: 121 GKLAGYISSLLTLAGFATAMAAVVLCVNSFIWQTEPFLYIDTVCDRSDPVFPTTGYRWMR 180
           GKLAGYISSLLTLAGFATAMAAVVLCVNSFIWQTEPFLYIDTVCDRSDPVFPTTGYRWMR
Sbjct: 121 GKLAGYISSLLTLAGFATAMAAVVLCVNSFIWQTEPFLYIDTVCDRSDPVFPTTGYRWMR 180

Query: 181 RSQENQWQKEECRAYMQMLRKLFTAIRALFLAVCVLKVIVSLVSLGVGLRNLCGQSSQPL 240
           RSQENQWQKEECRAYMQMLRKLFTAIRALFLAVCVLKVIVSLVSLGVGLRNLCGQSSQPL
Sbjct: 181 RSQENQWQKEECRAYMQMLRKLFTAIRALFLAVCVLKVIVSLVSLGVGLRNLCGQSSQPL 240

Query: 241 NEEGSEKRLLGENSVPPSPSREQTSTAIVL 270
           NEEGSEKRLLGENSVPPSPSREQTSTAIVL
Sbjct: 241 NEEGSEKRLLGENSVPPSPSREQTSTAIVL 270


>gi|156416016 transmembrane protein 176B isoform a [Homo sapiens]
          Length = 270

 Score =  539 bits (1389), Expect = e-154
 Identities = 270/270 (100%), Positives = 270/270 (100%)

Query: 1   MTQNTVIVNGVAMASRPSQPTHVNVHIHQESALTQLLKAGGSLKKFLFHPGDTVPSTARI 60
           MTQNTVIVNGVAMASRPSQPTHVNVHIHQESALTQLLKAGGSLKKFLFHPGDTVPSTARI
Sbjct: 1   MTQNTVIVNGVAMASRPSQPTHVNVHIHQESALTQLLKAGGSLKKFLFHPGDTVPSTARI 60

Query: 61  GYEQLALGVTQILLGVVSCVLGVCLSLGPWTVLSASGCAFWAGSVVIAAGAGAIVHEKHP 120
           GYEQLALGVTQILLGVVSCVLGVCLSLGPWTVLSASGCAFWAGSVVIAAGAGAIVHEKHP
Sbjct: 61  GYEQLALGVTQILLGVVSCVLGVCLSLGPWTVLSASGCAFWAGSVVIAAGAGAIVHEKHP 120

Query: 121 GKLAGYISSLLTLAGFATAMAAVVLCVNSFIWQTEPFLYIDTVCDRSDPVFPTTGYRWMR 180
           GKLAGYISSLLTLAGFATAMAAVVLCVNSFIWQTEPFLYIDTVCDRSDPVFPTTGYRWMR
Sbjct: 121 GKLAGYISSLLTLAGFATAMAAVVLCVNSFIWQTEPFLYIDTVCDRSDPVFPTTGYRWMR 180

Query: 181 RSQENQWQKEECRAYMQMLRKLFTAIRALFLAVCVLKVIVSLVSLGVGLRNLCGQSSQPL 240
           RSQENQWQKEECRAYMQMLRKLFTAIRALFLAVCVLKVIVSLVSLGVGLRNLCGQSSQPL
Sbjct: 181 RSQENQWQKEECRAYMQMLRKLFTAIRALFLAVCVLKVIVSLVSLGVGLRNLCGQSSQPL 240

Query: 241 NEEGSEKRLLGENSVPPSPSREQTSTAIVL 270
           NEEGSEKRLLGENSVPPSPSREQTSTAIVL
Sbjct: 241 NEEGSEKRLLGENSVPPSPSREQTSTAIVL 270


>gi|156416014 transmembrane protein 176B isoform a [Homo sapiens]
          Length = 270

 Score =  539 bits (1389), Expect = e-154
 Identities = 270/270 (100%), Positives = 270/270 (100%)

Query: 1   MTQNTVIVNGVAMASRPSQPTHVNVHIHQESALTQLLKAGGSLKKFLFHPGDTVPSTARI 60
           MTQNTVIVNGVAMASRPSQPTHVNVHIHQESALTQLLKAGGSLKKFLFHPGDTVPSTARI
Sbjct: 1   MTQNTVIVNGVAMASRPSQPTHVNVHIHQESALTQLLKAGGSLKKFLFHPGDTVPSTARI 60

Query: 61  GYEQLALGVTQILLGVVSCVLGVCLSLGPWTVLSASGCAFWAGSVVIAAGAGAIVHEKHP 120
           GYEQLALGVTQILLGVVSCVLGVCLSLGPWTVLSASGCAFWAGSVVIAAGAGAIVHEKHP
Sbjct: 61  GYEQLALGVTQILLGVVSCVLGVCLSLGPWTVLSASGCAFWAGSVVIAAGAGAIVHEKHP 120

Query: 121 GKLAGYISSLLTLAGFATAMAAVVLCVNSFIWQTEPFLYIDTVCDRSDPVFPTTGYRWMR 180
           GKLAGYISSLLTLAGFATAMAAVVLCVNSFIWQTEPFLYIDTVCDRSDPVFPTTGYRWMR
Sbjct: 121 GKLAGYISSLLTLAGFATAMAAVVLCVNSFIWQTEPFLYIDTVCDRSDPVFPTTGYRWMR 180

Query: 181 RSQENQWQKEECRAYMQMLRKLFTAIRALFLAVCVLKVIVSLVSLGVGLRNLCGQSSQPL 240
           RSQENQWQKEECRAYMQMLRKLFTAIRALFLAVCVLKVIVSLVSLGVGLRNLCGQSSQPL
Sbjct: 181 RSQENQWQKEECRAYMQMLRKLFTAIRALFLAVCVLKVIVSLVSLGVGLRNLCGQSSQPL 240

Query: 241 NEEGSEKRLLGENSVPPSPSREQTSTAIVL 270
           NEEGSEKRLLGENSVPPSPSREQTSTAIVL
Sbjct: 241 NEEGSEKRLLGENSVPPSPSREQTSTAIVL 270


>gi|156416022 transmembrane protein 176B isoform b [Homo sapiens]
          Length = 233

 Score =  446 bits (1146), Expect = e-125
 Identities = 233/270 (86%), Positives = 233/270 (86%), Gaps = 37/270 (13%)

Query: 1   MTQNTVIVNGVAMASRPSQPTHVNVHIHQESALTQLLKAGGSLKKFLFHPGDTVPSTARI 60
           MTQNTVIVNGVAMASRPSQPTHVNVHIHQESALTQLLKAGGSLKKFLFHPGDTVPSTARI
Sbjct: 1   MTQNTVIVNGVAMASRPSQPTHVNVHIHQESALTQLLKAGGSLKKFLFHPGDTVPSTARI 60

Query: 61  GYEQLALGVTQILLGVVSCVLGVCLSLGPWTVLSASGCAFWAGSVVIAAGAGAIVHEKHP 120
           GYEQLALGV                                     IAAGAGAIVHEKHP
Sbjct: 61  GYEQLALGV-------------------------------------IAAGAGAIVHEKHP 83

Query: 121 GKLAGYISSLLTLAGFATAMAAVVLCVNSFIWQTEPFLYIDTVCDRSDPVFPTTGYRWMR 180
           GKLAGYISSLLTLAGFATAMAAVVLCVNSFIWQTEPFLYIDTVCDRSDPVFPTTGYRWMR
Sbjct: 84  GKLAGYISSLLTLAGFATAMAAVVLCVNSFIWQTEPFLYIDTVCDRSDPVFPTTGYRWMR 143

Query: 181 RSQENQWQKEECRAYMQMLRKLFTAIRALFLAVCVLKVIVSLVSLGVGLRNLCGQSSQPL 240
           RSQENQWQKEECRAYMQMLRKLFTAIRALFLAVCVLKVIVSLVSLGVGLRNLCGQSSQPL
Sbjct: 144 RSQENQWQKEECRAYMQMLRKLFTAIRALFLAVCVLKVIVSLVSLGVGLRNLCGQSSQPL 203

Query: 241 NEEGSEKRLLGENSVPPSPSREQTSTAIVL 270
           NEEGSEKRLLGENSVPPSPSREQTSTAIVL
Sbjct: 204 NEEGSEKRLLGENSVPPSPSREQTSTAIVL 233


>gi|32484987 hepatocellular carcinoma-associated antigen 112 [Homo
           sapiens]
          Length = 235

 Score =  106 bits (264), Expect = 2e-23
 Identities = 74/215 (34%), Positives = 110/215 (51%), Gaps = 15/215 (6%)

Query: 13  MASRPSQPTHVNVHIHQESALTQLLKAGGSLKKFLFHPGDTVPSTARIGYEQLALG--VT 70
           MA    Q TH++VHIHQESAL +LL    S  +          +T   G  +L +   V 
Sbjct: 9   MAPEAPQHTHIDVHIHQESALAKLLLTCCSALR--------PRATQARGSSRLLVASWVM 60

Query: 71  QILLGVVSCVLGVCLSLGPWTVLSASGCAFWAGSVVIAAGAGAIVHEKHPGKLAGYISSL 130
           QI+LG++S VLG    +  +T+L  SG A W G+V + AGA A ++EK  G     + +L
Sbjct: 61  QIVLGILSAVLGGFFYIRDYTLLVTSGAAIWTGAVAVLAGAAAFIYEKRGGTYWALLRTL 120

Query: 131 LTLAGFATAMAAVVLCVNSFIWQTEPFLYIDTVCDRSDPVFPTTGYRWMRRSQENQWQKE 190
           LTLA F+TA+AA+ L    F +    +     +   SD   P        +S E   +  
Sbjct: 121 LTLAAFSTAIAALKLWNEDFRYGYSYYNSACRISSSSDWNTPAP-----TQSPEEVRRLH 175

Query: 191 ECRAYMQMLRKLFTAIRALFLAVCVLKVIVSLVSL 225
            C ++M ML+ LF  ++A+ L V +L ++ SL  L
Sbjct: 176 LCTSFMDMLKALFRTLQAMLLGVWILLLLASLTPL 210


>gi|38146116 hypothetical protein LOC10712 isoform a [Homo sapiens]
          Length = 668

 Score = 38.5 bits (88), Expect = 0.006
 Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 1/86 (1%)

Query: 65  LALGVTQILLGVVSCVLGVCLSLGPWTVLSASGCAFWAGSVVIAAGAGAIVHEKHPGKLA 124
           L LG+ Q+LLG++     +  S    T      C  WAG  +  +G   IV  K P  L 
Sbjct: 35  LTLGLVQVLLGILVVTFSMVASSVTTTESIKRSCPSWAGFSLAFSGVVGIVSWKRPFTLV 94

Query: 125 GYISSLLTLAGFATAMAAVVL-CVNS 149
               SLL++     +MA  VL C N+
Sbjct: 95  ISFFSLLSVLCVMLSMAGSVLSCKNA 120


>gi|166795252 hypothetical protein LOC23359 [Homo sapiens]
          Length = 539

 Score = 35.0 bits (79), Expect = 0.069
 Identities = 47/194 (24%), Positives = 76/194 (39%), Gaps = 23/194 (11%)

Query: 65  LALGVTQILLGVVSCVLGVCLSLGPWTVLSASGCAFWAGSVVIAAGAGAIVHEKHPGKLA 124
           LALG TQ+ LG +   +         +      C FWAG  V+ +G   +V  K P  L 
Sbjct: 33  LALGATQMALGCLIVAVSFAALALTTSARVRHSCPFWAGFSVLLSGLIGVVSWKRPLSLV 92

Query: 125 GYISSLLTLAGFATAMAAVVL-CVNSFI------WQTEPFLYIDTVCDRSDPVFPTTGYR 177
                LL+       +A  +L C N+ +       Q   F  ++ VC   +    ++G  
Sbjct: 93  ITFFMLLSAVCVMLNLAGSILSCQNAQLVNSLEGCQLIKFDSVE-VCVCCELQHQSSGCS 151

Query: 178 WMRRSQENQWQKEECRAYMQMLRKLF----------TAIRALFLAVCVLKVIVSLVSLGV 227
            +  + +    +E C A    L+ L           T + AL  A+C ++++ S V    
Sbjct: 152 NLGETLKLNPLQENCNAVRLTLKDLLFSVCALNVLSTIVCALATAMCCMQMVSSDV---- 207

Query: 228 GLRNLCGQSSQPLN 241
            L+    Q S P N
Sbjct: 208 -LQMFLPQRSHPAN 220


>gi|122114658 hypothetical protein LOC23053 [Homo sapiens]
          Length = 1842

 Score = 31.2 bits (69), Expect = 1.00
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)

Query: 17   PSQPTHVNVHIHQESALTQLLKAGGSLKKFLF-HPGDT 53
            P+QP+    H + E A T L+KAGG+    +F HP  +
Sbjct: 1235 PNQPSEAAAHFYFELAKTVLIKAGGNSSTSIFTHPSSS 1272


>gi|23110997 membrane-spanning 4-domains, subfamily A, member 5
           [Homo sapiens]
          Length = 200

 Score = 31.2 bits (69), Expect = 1.00
 Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 6/91 (6%)

Query: 67  LGVTQILLGVVSCVLGVCLS---LGPWT---VLSASGCAFWAGSVVIAAGAGAIVHEKHP 120
           LG  QIL G+++   GV      L P+     +  SG  FW   + I +GA  I  ++  
Sbjct: 50  LGTIQILFGIMTFSFGVIFLFTLLKPYPRFPFIFLSGYPFWGSVLFINSGAFLIAVKRKT 109

Query: 121 GKLAGYISSLLTLAGFATAMAAVVLCVNSFI 151
            +    +S ++       A+A ++L    FI
Sbjct: 110 TETLIILSRIMNFLSALGAIAGIILLTFGFI 140


>gi|8923206 membrane-spanning 4-domains, subfamily A, member 12
           [Homo sapiens]
          Length = 267

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 18/107 (16%)

Query: 63  EQLALGVTQILLGVVSCVLGVCLSLGPWTVLSASGCA---------FWAGSVVIAAGAGA 113
           E  ALGV QI++G++    G+ L L  ++     G A         FW G   I +G+ +
Sbjct: 87  EAKALGVIQIMVGLMHIGFGIVLCLISFSFREVLGFASTAVIGGYPFWGGLSFIISGSLS 146

Query: 114 IVHEKH------PGKLA-GYISSLLTLAGFATAMAAVVLCVNSFIWQ 153
           +   K        G L    +SS+L   G    +  V +C+N    Q
Sbjct: 147 VSASKELSRCLVKGSLGMNIVSSILAFIG--VILLLVDMCINGVAGQ 191


>gi|90903231 huntingtin [Homo sapiens]
          Length = 3144

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 2/87 (2%)

Query: 183  QENQWQKEECRAYMQMLRKLFT-AIRALFLAVCVLKVIVSLVSLGVGLRNLCGQSS-QPL 240
            QE  W     RA + M+ +LF+  ++ + +   VL  +    ++   L +L    S  P+
Sbjct: 1124 QEEVWPALGDRALVPMVEQLFSHLLKVINICAHVLDDVAPGPAIKAALPSLTNPPSLSPI 1183

Query: 241  NEEGSEKRLLGENSVPPSPSREQTSTA 267
              +G EK    + SVP SP +   ++A
Sbjct: 1184 RRKGKEKEPGEQASVPLSPKKGSEASA 1210


>gi|149588599 membrane-spanning 4-domains, subfamily A, member 15
           isoform 1 [Homo sapiens]
          Length = 240

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 8/76 (10%)

Query: 50  PGDTVPSTARIGYEQLALGVTQILLGVVSCVLGVCLSL------GPWTVLSASGCAFWAG 103
           P D  P    +  E   LG  QIL+G++    G  L +      G + +    G  FW G
Sbjct: 57  PPDLRPVETFLTGEPKVLGTVQILIGLIHLGFGSVLLMVRRGHVGIFFI--EGGVPFWGG 114

Query: 104 SVVIAAGAGAIVHEKH 119
           +  I +G+ ++  EK+
Sbjct: 115 ACFIISGSLSVAAEKN 130


>gi|7662302 TBK1 binding protein 1 [Homo sapiens]
          Length = 615

 Score = 28.5 bits (62), Expect = 6.5
 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 5/78 (6%)

Query: 183 QENQWQKEECRAYMQMLRKLFTAIRALFLAVCVLKVIVSLVSLGVGLRNLCGQSSQPLNE 242
           Q+N+ Q+E+    +Q   KL      L   +  ++ +V        LR +CG   Q   +
Sbjct: 118 QKNKEQEEQLGEMIQAYEKLCVEKSDLETELREMRALVE-----THLRQICGLEQQLRQQ 172

Query: 243 EGSEKRLLGENSVPPSPS 260
           +G +       S PP+P+
Sbjct: 173 QGLQDAAFSNLSPPPAPA 190


>gi|119226217 membrane-spanning 4-domains, subfamily A, member 14
           isoform 1 [Homo sapiens]
          Length = 679

 Score = 28.5 bits (62), Expect = 6.5
 Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 19/88 (21%)

Query: 63  EQLALGVTQILLGVVSCVLGVCLSLG--------PWTVLSASGCAFWAGSVVIAAGAGAI 114
           E   LG TQILL ++    G   +L         P  VL  +G  FW   + I  G   +
Sbjct: 41  EPRVLGATQILLALIIVGFGTIFALNYIGFSQRLPLVVL--TGYPFWGALIFILTGYLTV 98

Query: 115 VHEKHPGKLAG-------YISSLLTLAG 135
             +K   KL G        ISSL+ + G
Sbjct: 99  TDKK--SKLLGQGVTGMNVISSLVAITG 124


>gi|45505130 TAO kinase 2 isoform 2 [Homo sapiens]
          Length = 1235

 Score = 28.1 bits (61), Expect = 8.4
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)

Query: 227 VGLRNLCGQSSQPLNEEGSEKRLLGENSVPPSPSREQTSTAI 268
           VG R + G+    L  E  ++R+LGE S  PSPS ++  + +
Sbjct: 796 VGERRILGKEGATL--EPKQQRILGEESGAPSPSPQKHGSLV 835


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.134    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,387,547
Number of Sequences: 37866
Number of extensions: 429013
Number of successful extensions: 1246
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1235
Number of HSP's gapped (non-prelim): 17
length of query: 270
length of database: 18,247,518
effective HSP length: 101
effective length of query: 169
effective length of database: 14,423,052
effective search space: 2437495788
effective search space used: 2437495788
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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