Search of human proteins with 156151386

Search of human proteins with 156151386

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|156151386 hypothetical protein LOC80157 [Homo sapiens]
         (699 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|156151386 hypothetical protein LOC80157 [Homo sapiens]            1438   0.0  
gi|170016077 ATPase type 13A1 [Homo sapiens]                           33   0.69 
gi|110681719 hypothetical protein LOC23731 [Homo sapiens]              33   0.90 
gi|37694062 aquaporin 1 [Homo sapiens]                                 32   2.6  
gi|87196600 polyserase 3 [Homo sapiens]                                30   5.8  
gi|24497490 solute carrier family 22 member 4 [Homo sapiens]           30   7.6  
gi|94421454 serotonin 5-HT4 receptor isoform a [Homo sapiens]          30   9.9  

>gi|156151386 hypothetical protein LOC80157 [Homo sapiens]
          Length = 699

 Score = 1438 bits (3722), Expect = 0.0
 Identities = 699/699 (100%), Positives = 699/699 (100%)

Query: 1   MPSLWREILLESLLGCVSWSLYHDLGPMIYYFPLQTLELTGLEGFSIAFLSPIFLTITPF 60
           MPSLWREILLESLLGCVSWSLYHDLGPMIYYFPLQTLELTGLEGFSIAFLSPIFLTITPF
Sbjct: 1   MPSLWREILLESLLGCVSWSLYHDLGPMIYYFPLQTLELTGLEGFSIAFLSPIFLTITPF 60

Query: 61  WKLVNKKWMLTLLRIITIGSIASFQAPNAKLRLMVLALGVSSSLIVQAVTWWSGSHLQRY 120
           WKLVNKKWMLTLLRIITIGSIASFQAPNAKLRLMVLALGVSSSLIVQAVTWWSGSHLQRY
Sbjct: 61  WKLVNKKWMLTLLRIITIGSIASFQAPNAKLRLMVLALGVSSSLIVQAVTWWSGSHLQRY 120

Query: 121 LRIWGFILGQIVLVVLRIWYTSLNPIWSYQMSNKVILTLSAIATLDRIGTDGDCSKPEEK 180
           LRIWGFILGQIVLVVLRIWYTSLNPIWSYQMSNKVILTLSAIATLDRIGTDGDCSKPEEK
Sbjct: 121 LRIWGFILGQIVLVVLRIWYTSLNPIWSYQMSNKVILTLSAIATLDRIGTDGDCSKPEEK 180

Query: 181 KTGEVATGMASRPNWLLAGAAFGSLVFLTHWVFGEVSLVSRWAVSGHPHPGPDPNPFGGA 240
           KTGEVATGMASRPNWLLAGAAFGSLVFLTHWVFGEVSLVSRWAVSGHPHPGPDPNPFGGA
Sbjct: 181 KTGEVATGMASRPNWLLAGAAFGSLVFLTHWVFGEVSLVSRWAVSGHPHPGPDPNPFGGA 240

Query: 241 VLLCLASGLMLPSCLWFRGTGLIWWVTGTASAAGLLYLHTWAAAVSGCVFAIFTASMWPQ 300
           VLLCLASGLMLPSCLWFRGTGLIWWVTGTASAAGLLYLHTWAAAVSGCVFAIFTASMWPQ
Sbjct: 241 VLLCLASGLMLPSCLWFRGTGLIWWVTGTASAAGLLYLHTWAAAVSGCVFAIFTASMWPQ 300

Query: 301 TLGHLINSGTNPGKTMTIAMIFYLLEIFFCAWCTAFKFVPGGVYARERSDVLLGTMMLII 360
           TLGHLINSGTNPGKTMTIAMIFYLLEIFFCAWCTAFKFVPGGVYARERSDVLLGTMMLII
Sbjct: 301 TLGHLINSGTNPGKTMTIAMIFYLLEIFFCAWCTAFKFVPGGVYARERSDVLLGTMMLII 360

Query: 361 GLNMLFGPKKNLDLLLQTKNSSKVLFRKSEKYMKLFLWLLVGVGLLGLGLRHKAYERKLG 420
           GLNMLFGPKKNLDLLLQTKNSSKVLFRKSEKYMKLFLWLLVGVGLLGLGLRHKAYERKLG
Sbjct: 361 GLNMLFGPKKNLDLLLQTKNSSKVLFRKSEKYMKLFLWLLVGVGLLGLGLRHKAYERKLG 420

Query: 421 KVAPTKEVSAAIWPFRFGYDNEGWSSLERSAHLLNETGADFITILESDASKPYMGNNDLT 480
           KVAPTKEVSAAIWPFRFGYDNEGWSSLERSAHLLNETGADFITILESDASKPYMGNNDLT
Sbjct: 421 KVAPTKEVSAAIWPFRFGYDNEGWSSLERSAHLLNETGADFITILESDASKPYMGNNDLT 480

Query: 481 MWLGEKLGFYTDFGPSTRYHTWGIMALSRYPIVKSEHHLLPSPEGEIAPAITLTVNISGK 540
           MWLGEKLGFYTDFGPSTRYHTWGIMALSRYPIVKSEHHLLPSPEGEIAPAITLTVNISGK
Sbjct: 481 MWLGEKLGFYTDFGPSTRYHTWGIMALSRYPIVKSEHHLLPSPEGEIAPAITLTVNISGK 540

Query: 541 LVDFVVTHFGNHEDDLDRKLQAIAVSKLLKSSSNQVIFLGYITSAPGSRDYLQLTEHGNV 600
           LVDFVVTHFGNHEDDLDRKLQAIAVSKLLKSSSNQVIFLGYITSAPGSRDYLQLTEHGNV
Sbjct: 541 LVDFVVTHFGNHEDDLDRKLQAIAVSKLLKSSSNQVIFLGYITSAPGSRDYLQLTEHGNV 600

Query: 601 KDIDSTDHDRWCEYIMYRGLIRLGYARISHAELSDSEIQMAKFRIPDDPTNYRDNQKVVI 660
           KDIDSTDHDRWCEYIMYRGLIRLGYARISHAELSDSEIQMAKFRIPDDPTNYRDNQKVVI
Sbjct: 601 KDIDSTDHDRWCEYIMYRGLIRLGYARISHAELSDSEIQMAKFRIPDDPTNYRDNQKVVI 660

Query: 661 DHREVSEKIHFNPRFGSYKEGHNYENNHHFHMNTPKYFL 699
           DHREVSEKIHFNPRFGSYKEGHNYENNHHFHMNTPKYFL
Sbjct: 661 DHREVSEKIHFNPRFGSYKEGHNYENNHHFHMNTPKYFL 699


>gi|170016077 ATPase type 13A1 [Homo sapiens]
          Length = 1204

 Score = 33.5 bits (75), Expect = 0.69
 Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 226 GHPHPGPDPNPFGGAVLLCLASGLMLPSCLW-FRGTGLIWWVTGTASAAGLLYLHTWAAA 284
           G P PGP P     A    +A+G  L + +W +R   L+  +T     AGLLY     AA
Sbjct: 24  GQPKPGPQPRALLAAGPALIANGDELVAAVWPYRRLALLRRLT-VLPFAGLLYPAWLGAA 82

Query: 285 VSGC 288
            +GC
Sbjct: 83  AAGC 86


>gi|110681719 hypothetical protein LOC23731 [Homo sapiens]
          Length = 879

 Score = 33.1 bits (74), Expect = 0.90
 Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 10/114 (8%)

Query: 221 RWAVSGHP--HPGPDPNPFGGAVLLCLASGLMLPSCLWFRGTGLIWWVTGTASAAGLLYL 278
           +W +S  P   PGP  N  G +V   +  G+   S       GL  W+T T     ++++
Sbjct: 681 KWVISLTPLSQPGPSSNIIGQSVEEAIR-GVFDASLKMAGFYGLYTWLTHTMFGINIVFI 739

Query: 279 HTWAAAVSGCVFAIFTASMW---PQTLGHLINSGTNPGKTMTIAMIFYLLEIFF 329
            +  AA+ G V   F  + W   P  L   +  G   G    + +IF+LL  +F
Sbjct: 740 PSALAAILGAV--PFLGTYWAAVPAVLDLWLTQGL--GCKAILLLIFHLLPTYF 789


>gi|37694062 aquaporin 1 [Homo sapiens]
          Length = 269

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 8/66 (12%)

Query: 60  FWKLVNKKWMLTLLRI-ITIGSIASFQAPNAKLRLMV-------LALGVSSSLIVQAVTW 111
           FW+ V  +++ T L + I+IGS   F+ P    +  V       LA G+S + + Q+V  
Sbjct: 10  FWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSVGH 69

Query: 112 WSGSHL 117
            SG+HL
Sbjct: 70  ISGAHL 75


>gi|87196600 polyserase 3 [Homo sapiens]
          Length = 553

 Score = 30.4 bits (67), Expect = 5.8
 Identities = 26/70 (37%), Positives = 33/70 (47%), Gaps = 5/70 (7%)

Query: 227 HPHPGPDPNPFGGAVLLCLASGLMLPSCLWFRGTGLIWWVTGTASAAGLLYLHTWAAAVS 286
           H  PG D +P    ++   A G  LPSC    G  L+  V GT   AG   LH++  A  
Sbjct: 448 HAAPGGDGSPILPGMVCTSAVG-ELPSCEGLSGAPLVHEVRGTWFLAG---LHSFGDACQ 503

Query: 287 GCVF-AIFTA 295
           G    A+FTA
Sbjct: 504 GPARPAVFTA 513


>gi|24497490 solute carrier family 22 member 4 [Homo sapiens]
          Length = 551

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 32/134 (23%)

Query: 237 FGGAVLLCLASGLMLPSCLWFRGTGLIWWVT-GTASAAGLLYLHTWAAAVSGCVFAIFTA 295
           +GG VLL +    ++P   +F   GL+     G  SA  +LY              +FTA
Sbjct: 407 WGGGVLLFIQ---LVPVDYYFLSIGLVMLGKFGITSAFSMLY--------------VFTA 449

Query: 296 SMWPQTLGHLINSGTNPGKTMTIAMIFYLLEIFFCAWCTAFKFVPGGVYARERSDVLLGT 355
            ++P  + ++       G T T + +  ++  +F         V  G Y R    +++G+
Sbjct: 450 ELYPTLVRNMA-----VGVTSTASRVGSIIAPYF---------VYLGAYNRMLPYIVMGS 495

Query: 356 MMLIIGLNMLFGPK 369
           + ++IG+  LF P+
Sbjct: 496 LTVLIGILTLFFPE 509


>gi|94421454 serotonin 5-HT4 receptor isoform a [Homo sapiens]
          Length = 387

 Score = 29.6 bits (65), Expect = 9.9
 Identities = 13/39 (33%), Positives = 22/39 (56%)

Query: 516 EHHLLPSPEGEIAPAITLTVNISGKLVDFVVTHFGNHED 554
           E +  PS  G+  P  T T+N S  ++ + V H G+H++
Sbjct: 332 ERYRRPSILGQTVPCSTTTINGSTHVLRYTVLHRGHHQE 370


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.139    0.443 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,195,538
Number of Sequences: 37866
Number of extensions: 1219313
Number of successful extensions: 2640
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2637
Number of HSP's gapped (non-prelim): 8
length of query: 699
length of database: 18,247,518
effective HSP length: 109
effective length of query: 590
effective length of database: 14,120,124
effective search space: 8330873160
effective search space used: 8330873160
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.