Search of human proteins with 154240720

Search of human proteins with 154240720

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|154240720 hypothetical protein LOC134145 [Homo sapiens]
         (233 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|154240720 hypothetical protein LOC134145 [Homo sapiens]            481   e-136
gi|13027600 hypothetical protein LOC65990 [Homo sapiens]              154   5e-38
gi|166064062 tumor suppressing subtransferable candidate 5 [Homo...    30   1.4  
gi|166064060 tumor suppressing subtransferable candidate 5 [Homo...    30   1.4  
gi|7661536 B9 protein [Homo sapiens]                                   30   1.8  
gi|4504503 hydroxysteroid (17-beta) dehydrogenase 2 [Homo sapiens]     28   5.2  
gi|145864465 annexin A9 [Homo sapiens]                                 28   5.2  
gi|18860920 estrogen-related receptor alpha [Homo sapiens]             28   6.7  
gi|122937327 BTB (POZ) domain containing 17 [Homo sapiens]             28   6.7  
gi|58219056 methyltransferase like 10 [Homo sapiens]                   28   8.8  

>gi|154240720 hypothetical protein LOC134145 [Homo sapiens]
          Length = 233

 Score =  481 bits (1239), Expect = e-136
 Identities = 233/233 (100%), Positives = 233/233 (100%)

Query: 1   MEGGGGIPLETLKEESQSRHVLPASFEVNSLQKSNWGFLLTGLVGGTLVAVYAVATPFVT 60
           MEGGGGIPLETLKEESQSRHVLPASFEVNSLQKSNWGFLLTGLVGGTLVAVYAVATPFVT
Sbjct: 1   MEGGGGIPLETLKEESQSRHVLPASFEVNSLQKSNWGFLLTGLVGGTLVAVYAVATPFVT 60

Query: 61  PALRKVCLPFVPATTKQIENVVKMLRCRRGSLVDIGSGDGRIVIAAAKKGFTAVGYELNP 120
           PALRKVCLPFVPATTKQIENVVKMLRCRRGSLVDIGSGDGRIVIAAAKKGFTAVGYELNP
Sbjct: 61  PALRKVCLPFVPATTKQIENVVKMLRCRRGSLVDIGSGDGRIVIAAAKKGFTAVGYELNP 120

Query: 121 WLVWYSRYRAWREGVHGSAKFYISDLWKVTFSQYSNVVIFGVPQMMLQLEKKLERELEDD 180
           WLVWYSRYRAWREGVHGSAKFYISDLWKVTFSQYSNVVIFGVPQMMLQLEKKLERELEDD
Sbjct: 121 WLVWYSRYRAWREGVHGSAKFYISDLWKVTFSQYSNVVIFGVPQMMLQLEKKLERELEDD 180

Query: 181 ARVIACRFPFPHWTPDHVTGEGIDTVWAYDASTFRGREKRPCTSMHFQLPIQA 233
           ARVIACRFPFPHWTPDHVTGEGIDTVWAYDASTFRGREKRPCTSMHFQLPIQA
Sbjct: 181 ARVIACRFPFPHWTPDHVTGEGIDTVWAYDASTFRGREKRPCTSMHFQLPIQA 233


>gi|13027600 hypothetical protein LOC65990 [Homo sapiens]
          Length = 235

 Score =  154 bits (390), Expect = 5e-38
 Identities = 89/193 (46%), Positives = 116/193 (60%), Gaps = 9/193 (4%)

Query: 46  GTLVAVYAVATPFVTPALRKVCL----PFVPATTKQIENVVKMLRCRRGSLVDIGSGDGR 101
           G+ +A YAV    + P  R+V L    P+V A+ +Q+E+V+ +LR R G  VD+GSGDGR
Sbjct: 29  GSGLAAYAVWALLLQPGFRRVPLRLQVPYVGASARQVEHVLSLLRGRPGKTVDLGSGDGR 88

Query: 102 IVIAAAKKGFT-AVGYELNPWLVWYSRYRAWREGVHGSAKFYISDLWKVTFSQYSNVVIF 160
           IV+AA + G   AVGYELNPWLV  +R  AWR G  GS  +   DLWKV+     NV +F
Sbjct: 89  IVLAAHRCGLRPAVGYELNPWLVALARLHAWRAGCAGSVCYRRKDLWKVSLRDCRNVSVF 148

Query: 161 GVPQMMLQLEKKLERELEDDARVIACRFPFPHWTPDHVTGEGIDTVWAYDASTFRGREKR 220
             P ++  LE KL  EL   ARV++ RFP P W P    GEG+D VWAYD     G+   
Sbjct: 149 LAPSVLPLLEDKLRTELPAGARVVSGRFPLPTWQPVTAVGEGLDRVWAYDVPE-GGQAGE 207

Query: 221 PCTSMHFQLPIQA 233
             +S   ++PIQA
Sbjct: 208 AASS---RIPIQA 217


>gi|166064062 tumor suppressing subtransferable candidate 5 [Homo
           sapiens]
          Length = 424

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 5/45 (11%)

Query: 37  GFLLTGLVGGTLVAVYAVATPFVTPALRKV---CLPF--VPATTK 76
           G +L  L+GGTLV+ Y +  P +  AL  +    L F  +PA+TK
Sbjct: 163 GVILGSLLGGTLVSAYGIQCPAILAALATLLGAVLSFTCIPASTK 207


>gi|166064060 tumor suppressing subtransferable candidate 5 [Homo
           sapiens]
          Length = 424

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 5/45 (11%)

Query: 37  GFLLTGLVGGTLVAVYAVATPFVTPALRKV---CLPF--VPATTK 76
           G +L  L+GGTLV+ Y +  P +  AL  +    L F  +PA+TK
Sbjct: 163 GVILGSLLGGTLVSAYGIQCPAILAALATLLGAVLSFTCIPASTK 207


>gi|7661536 B9 protein [Homo sapiens]
          Length = 204

 Score = 30.0 bits (66), Expect = 1.8
 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 6/75 (8%)

Query: 45  GGTLVAVY-AVATPFVTPALRKVCLP-FVPATTKQIENVVKMLRCRRGSLVD---IGSGD 99
           G  +V  Y AV  PF +P   K  +P FVP +T +++        RR    D   +  G+
Sbjct: 96  GNDVVRGYGAVHVPF-SPGRHKRTIPMFVPESTSKLQKFTSWFMGRRPEYTDPKVVAQGE 154

Query: 100 GRIVIAAAKKGFTAV 114
           GR V     +GF  +
Sbjct: 155 GREVTRVRSQGFVTL 169


>gi|4504503 hydroxysteroid (17-beta) dehydrogenase 2 [Homo sapiens]
          Length = 387

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 1/74 (1%)

Query: 4   GGGIPLETLKEESQSRHVLPASFEVNSLQKSNWGFLLTGLVGGTLVAVYAVATPFVTPAL 63
           GGG P+E L     S+  +     V  L+ S WG  +  +  G  +   A  T      L
Sbjct: 221 GGGAPMERLASYGSSKAAVTMFSSVMRLELSKWGIKVASIQPGGFLTNIA-GTSDKWEKL 279

Query: 64  RKVCLPFVPATTKQ 77
            K  L  +PA  ++
Sbjct: 280 EKDILDHLPAEVQE 293


>gi|145864465 annexin A9 [Homo sapiens]
          Length = 345

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 13/31 (41%), Positives = 18/31 (58%)

Query: 198 VTGEGIDTVWAYDASTFRGREKRPCTSMHFQ 228
           +TG+G+D     D  T R RE+R   S +FQ
Sbjct: 54  ITGQGVDRSAIVDVLTNRSREQRQLISRNFQ 84


>gi|18860920 estrogen-related receptor alpha [Homo sapiens]
          Length = 423

 Score = 28.1 bits (61), Expect = 6.7
 Identities = 13/44 (29%), Positives = 23/44 (52%)

Query: 130 AWREGVHGSAKFYISDLWKVTFSQYSNVVIFGVPQMMLQLEKKL 173
           +W + + G +   +SD   V  S +  V++ GV Q  L L+ +L
Sbjct: 241 SWAKSIPGFSSLSLSDQMSVLQSVWMEVLVLGVAQRSLPLQDEL 284


>gi|122937327 BTB (POZ) domain containing 17 [Homo sapiens]
          Length = 478

 Score = 28.1 bits (61), Expect = 6.7
 Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 6/67 (8%)

Query: 9   LETLKEESQSRHVLPASFEVNSLQKSNWGFLLTGLVGGTLVAV----YAVATPFVTPALR 64
           L  L  ++   H L   + V+SLQ+    ++   L GG   AV    YAV T     ALR
Sbjct: 128 LTVLLTQAIPLHRLATKYGVSSLQRGVADYMRAHLAGGAGPAVGWYHYAVGTG--DEALR 185

Query: 65  KVCLPFV 71
           + CL F+
Sbjct: 186 ESCLQFL 192


>gi|58219056 methyltransferase like 10 [Homo sapiens]
          Length = 291

 Score = 27.7 bits (60), Expect = 8.8
 Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 1/46 (2%)

Query: 91  SLVDIGSGDGRIVIAAAKKGFTAV-GYELNPWLVWYSRYRAWREGV 135
           S++DIG+G+G  ++  AK GF+ + G + +P  +  S     +EG+
Sbjct: 82  SVLDIGTGNGVFLVELAKFGFSNITGIDYSPSAIQLSGSIIEKEGL 127


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.138    0.437 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,207,399
Number of Sequences: 37866
Number of extensions: 389281
Number of successful extensions: 759
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 752
Number of HSP's gapped (non-prelim): 10
length of query: 233
length of database: 18,247,518
effective HSP length: 99
effective length of query: 134
effective length of database: 14,498,784
effective search space: 1942837056
effective search space used: 1942837056
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.