Search of human proteins with 151101386

Search of human proteins with 151101386

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|151101386 coenzyme Q10 homolog A isoform b [Homo sapiens]
         (215 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|151101386 coenzyme Q10 homolog A isoform b [Homo sapiens]          432   e-122
gi|151101384 coenzyme Q10 homolog A isoform a [Homo sapiens]          408   e-114
gi|13376737 coenzyme Q10 homolog B [Homo sapiens]                     296   9e-81
gi|219555661 intraflagellar transport 81-like isoform 1 [Homo sa...    30   2.0  
gi|34147403 intraflagellar transport 81-like isoform 2 [Homo sap...    30   2.0  
gi|32526901 intraflagellar transport 81-like isoform 1 [Homo sap...    30   2.0  

>gi|151101386 coenzyme Q10 homolog A isoform b [Homo sapiens]
          Length = 215

 Score =  432 bits (1112), Expect = e-122
 Identities = 215/215 (100%), Positives = 215/215 (100%)

Query: 1   MLLQVVREGKFSGFLTSCSLLLPRAAQILAAEAGLPSSRSFMGFAAPFTNKRKAYSERRI 60
           MLLQVVREGKFSGFLTSCSLLLPRAAQILAAEAGLPSSRSFMGFAAPFTNKRKAYSERRI
Sbjct: 1   MLLQVVREGKFSGFLTSCSLLLPRAAQILAAEAGLPSSRSFMGFAAPFTNKRKAYSERRI 60

Query: 61  MGYSMQEMYEVVSNVQEYREFVPWCKKSLVVSSRKGHLKAQLEVGFPPVMERYTSAVSMV 120
           MGYSMQEMYEVVSNVQEYREFVPWCKKSLVVSSRKGHLKAQLEVGFPPVMERYTSAVSMV
Sbjct: 61  MGYSMQEMYEVVSNVQEYREFVPWCKKSLVVSSRKGHLKAQLEVGFPPVMERYTSAVSMV 120

Query: 121 KPHMVKAVCTDGKLFNHLETIWRFSPGIPAYPRTCTVDFSISFEFRSLLHSQLATMFFDE 180
           KPHMVKAVCTDGKLFNHLETIWRFSPGIPAYPRTCTVDFSISFEFRSLLHSQLATMFFDE
Sbjct: 121 KPHMVKAVCTDGKLFNHLETIWRFSPGIPAYPRTCTVDFSISFEFRSLLHSQLATMFFDE 180

Query: 181 VVKQNVAAFERRAATKFGPETAIPRELMFHEVHQT 215
           VVKQNVAAFERRAATKFGPETAIPRELMFHEVHQT
Sbjct: 181 VVKQNVAAFERRAATKFGPETAIPRELMFHEVHQT 215


>gi|151101384 coenzyme Q10 homolog A isoform a [Homo sapiens]
          Length = 247

 Score =  408 bits (1049), Expect = e-114
 Identities = 202/202 (100%), Positives = 202/202 (100%)

Query: 14  FLTSCSLLLPRAAQILAAEAGLPSSRSFMGFAAPFTNKRKAYSERRIMGYSMQEMYEVVS 73
           FLTSCSLLLPRAAQILAAEAGLPSSRSFMGFAAPFTNKRKAYSERRIMGYSMQEMYEVVS
Sbjct: 46  FLTSCSLLLPRAAQILAAEAGLPSSRSFMGFAAPFTNKRKAYSERRIMGYSMQEMYEVVS 105

Query: 74  NVQEYREFVPWCKKSLVVSSRKGHLKAQLEVGFPPVMERYTSAVSMVKPHMVKAVCTDGK 133
           NVQEYREFVPWCKKSLVVSSRKGHLKAQLEVGFPPVMERYTSAVSMVKPHMVKAVCTDGK
Sbjct: 106 NVQEYREFVPWCKKSLVVSSRKGHLKAQLEVGFPPVMERYTSAVSMVKPHMVKAVCTDGK 165

Query: 134 LFNHLETIWRFSPGIPAYPRTCTVDFSISFEFRSLLHSQLATMFFDEVVKQNVAAFERRA 193
           LFNHLETIWRFSPGIPAYPRTCTVDFSISFEFRSLLHSQLATMFFDEVVKQNVAAFERRA
Sbjct: 166 LFNHLETIWRFSPGIPAYPRTCTVDFSISFEFRSLLHSQLATMFFDEVVKQNVAAFERRA 225

Query: 194 ATKFGPETAIPRELMFHEVHQT 215
           ATKFGPETAIPRELMFHEVHQT
Sbjct: 226 ATKFGPETAIPRELMFHEVHQT 247


>gi|13376737 coenzyme Q10 homolog B [Homo sapiens]
          Length = 238

 Score =  296 bits (758), Expect = 9e-81
 Identities = 146/214 (68%), Positives = 169/214 (78%), Gaps = 10/214 (4%)

Query: 6   VREGKFSGFLTSCSLL----LPRAAQILAAEAGLPSSRSFMGFAAPFTNKRKAYSERRIM 61
           VR G++   L SC +L    LP    IL  E     +R+F    AP  NKRK YSERRI+
Sbjct: 31  VRNGRY---LASCGILMSRTLPLHTSILPKEI---CARTFFKITAPLINKRKEYSERRIL 84

Query: 62  GYSMQEMYEVVSNVQEYREFVPWCKKSLVVSSRKGHLKAQLEVGFPPVMERYTSAVSMVK 121
           GYSMQEMY+VVS V++Y+ FVPWCKKS V+S R G+ K +LE+GFPPV+ERYTS V++VK
Sbjct: 85  GYSMQEMYDVVSGVEDYKHFVPWCKKSDVISKRSGYCKTRLEIGFPPVLERYTSVVTLVK 144

Query: 122 PHMVKAVCTDGKLFNHLETIWRFSPGIPAYPRTCTVDFSISFEFRSLLHSQLATMFFDEV 181
           PH+VKA CTDG+LFNHLETIWRFSPG+P YPRTCT+DFSISFEFRSLLHSQLAT+FFDEV
Sbjct: 145 PHLVKASCTDGRLFNHLETIWRFSPGLPGYPRTCTLDFSISFEFRSLLHSQLATLFFDEV 204

Query: 182 VKQNVAAFERRAATKFGPETAIPRELMFHEVHQT 215
           VKQ VAAFERRA   +GPET IPRELM HEVH T
Sbjct: 205 VKQMVAAFERRACKLYGPETNIPRELMLHEVHHT 238


>gi|219555661 intraflagellar transport 81-like isoform 1 [Homo
           sapiens]
          Length = 676

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 23/102 (22%), Positives = 44/102 (43%), Gaps = 9/102 (8%)

Query: 2   LLQVVREGKFSGFLTSCSLLLPRAAQILAAEAGLPSSRSFMGFAAPFTNKRKAYSERRIM 61
           LLQ   E K   +L    + L   ++ L  E    +++ +      F    K Y + +I 
Sbjct: 105 LLQRTNELKKRAYLARFLIKLEVPSEFLQDETVADTNKQYEELMEAFKTLHKEYEQLKIS 164

Query: 62  GYSMQEMYEVVSNVQEYREFVPWCKKSLVVSSRKGHLKAQLE 103
           G+S  E+ + +S ++E ++          +  R  HLK ++E
Sbjct: 165 GFSTAEIRKDISAMEEEKD---------QLIKRVEHLKKRVE 197


>gi|34147403 intraflagellar transport 81-like isoform 2 [Homo
           sapiens]
          Length = 431

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 23/102 (22%), Positives = 44/102 (43%), Gaps = 9/102 (8%)

Query: 2   LLQVVREGKFSGFLTSCSLLLPRAAQILAAEAGLPSSRSFMGFAAPFTNKRKAYSERRIM 61
           LLQ   E K   +L    + L   ++ L  E    +++ +      F    K Y + +I 
Sbjct: 105 LLQRTNELKKRAYLARFLIKLEVPSEFLQDETVADTNKQYEELMEAFKTLHKEYEQLKIS 164

Query: 62  GYSMQEMYEVVSNVQEYREFVPWCKKSLVVSSRKGHLKAQLE 103
           G+S  E+ + +S ++E ++          +  R  HLK ++E
Sbjct: 165 GFSTAEIRKDISAMEEEKD---------QLIKRVEHLKKRVE 197


>gi|32526901 intraflagellar transport 81-like isoform 1 [Homo
           sapiens]
          Length = 676

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 23/102 (22%), Positives = 44/102 (43%), Gaps = 9/102 (8%)

Query: 2   LLQVVREGKFSGFLTSCSLLLPRAAQILAAEAGLPSSRSFMGFAAPFTNKRKAYSERRIM 61
           LLQ   E K   +L    + L   ++ L  E    +++ +      F    K Y + +I 
Sbjct: 105 LLQRTNELKKRAYLARFLIKLEVPSEFLQDETVADTNKQYEELMEAFKTLHKEYEQLKIS 164

Query: 62  GYSMQEMYEVVSNVQEYREFVPWCKKSLVVSSRKGHLKAQLE 103
           G+S  E+ + +S ++E ++          +  R  HLK ++E
Sbjct: 165 GFSTAEIRKDISAMEEEKD---------QLIKRVEHLKKRVE 197


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.324    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,475,396
Number of Sequences: 37866
Number of extensions: 278217
Number of successful extensions: 696
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 690
Number of HSP's gapped (non-prelim): 6
length of query: 215
length of database: 18,247,518
effective HSP length: 98
effective length of query: 117
effective length of database: 14,536,650
effective search space: 1700788050
effective search space used: 1700788050
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.