Search of human proteins with 150456451

Search of human proteins with 150456451

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|150456451 hypothetical protein LOC54914 [Homo sapiens]
         (1801 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|150456451 hypothetical protein LOC54914 [Homo sapiens]            3548   0.0  
gi|18644886 forkhead box P1 isoform 1 [Homo sapiens]                   33   3.3  
gi|189083802 myosin VIIA isoform 2 [Homo sapiens]                      33   3.3  
gi|189083800 myosin VIIA isoform 3 [Homo sapiens]                      33   3.3  
gi|189083798 myosin VIIA isoform 1 [Homo sapiens]                      33   3.3  
gi|162287219 prune homolog 2 [Homo sapiens]                            32   4.3  
gi|52693943 olfactory receptor, family 6, subfamily K, member 3 ...    32   4.3  
gi|169208826 PREDICTED: hypothetical protein [Homo sapiens]            32   5.6  
gi|153792393 G protein-coupled receptor 137C [Homo sapiens]            32   7.3  
gi|23397642 GREB1 protein isoform a [Homo sapiens]                     32   7.3  

>gi|150456451 hypothetical protein LOC54914 [Homo sapiens]
          Length = 1801

 Score = 3548 bits (9201), Expect = 0.0
 Identities = 1801/1801 (100%), Positives = 1801/1801 (100%)

Query: 1    MSDDIRKRFEFPNSLIQSQAVGHLIAAVLKENGFSEKIHQSTNQTPALNLLWEKCCSDNV 60
            MSDDIRKRFEFPNSLIQSQAVGHLIAAVLKENGFSEKIHQSTNQTPALNLLWEKCCSDNV
Sbjct: 1    MSDDIRKRFEFPNSLIQSQAVGHLIAAVLKENGFSEKIHQSTNQTPALNLLWEKCCSDNV 60

Query: 61   VVRTACCEGLVALVAQDHAEFSYVLNGILNLIPSTRNTHGLIKAIMHLLQMQALKEGQGG 120
            VVRTACCEGLVALVAQDHAEFSYVLNGILNLIPSTRNTHGLIKAIMHLLQMQALKEGQGG
Sbjct: 61   VVRTACCEGLVALVAQDHAEFSYVLNGILNLIPSTRNTHGLIKAIMHLLQMQALKEGQGG 120

Query: 121  EKNIQSIYTIRNHPHPLITVLEHRPDCWPVFLQQLTAFFQQCPERLEVSCIQIMAPFLWY 180
            EKNIQSIYTIRNHPHPLITVLEHRPDCWPVFLQQLTAFFQQCPERLEVSCIQIMAPFLWY
Sbjct: 121  EKNIQSIYTIRNHPHPLITVLEHRPDCWPVFLQQLTAFFQQCPERLEVSCIQIMAPFLWY 180

Query: 181  LYCEPSQLQEYAKLRLALLKVLLQPQVLCDKDQPSILEQQILQLCCDIVPCLQVKDLIQT 240
            LYCEPSQLQEYAKLRLALLKVLLQPQVLCDKDQPSILEQQILQLCCDIVPCLQVKDLIQT
Sbjct: 181  LYCEPSQLQEYAKLRLALLKVLLQPQVLCDKDQPSILEQQILQLCCDIVPCLQVKDLIQT 240

Query: 241  TEAMMFIEEVCLSLLRHPVFWKIQLTQMSLQLLCVSEVSLKITGECSSSIHLLEHSVELL 300
            TEAMMFIEEVCLSLLRHPVFWKIQLTQMSLQLLCVSEVSLKITGECSSSIHLLEHSVELL
Sbjct: 241  TEAMMFIEEVCLSLLRHPVFWKIQLTQMSLQLLCVSEVSLKITGECSSSIHLLEHSVELL 300

Query: 301  KEDFPVELVIIGIALLLLQTPASQQKPILNLALKLLSVTEDQKIPKSSLLLVMPILQILS 360
            KEDFPVELVIIGIALLLLQTPASQQKPILNLALKLLSVTEDQKIPKSSLLLVMPILQILS
Sbjct: 301  KEDFPVELVIIGIALLLLQTPASQQKPILNLALKLLSVTEDQKIPKSSLLLVMPILQILS 360

Query: 361  STALEDCISVDEEGPSRQQLALNLLEMIQQECYRDDHQKLSYKLVCPVTSMYGTIFTAWR 420
            STALEDCISVDEEGPSRQQLALNLLEMIQQECYRDDHQKLSYKLVCPVTSMYGTIFTAWR
Sbjct: 361  STALEDCISVDEEGPSRQQLALNLLEMIQQECYRDDHQKLSYKLVCPVTSMYGTIFTAWR 420

Query: 421  ILEVMTDSSAASDWLASVESLLPITAVIPAPAFLLLAHLLVEDKGQNLHQILKVTTELAQ 480
            ILEVMTDSSAASDWLASVESLLPITAVIPAPAFLLLAHLLVEDKGQNLHQILKVTTELAQ
Sbjct: 421  ILEVMTDSSAASDWLASVESLLPITAVIPAPAFLLLAHLLVEDKGQNLHQILKVTTELAQ 480

Query: 481  ADSSQVPNLIPVLMFKLGRPLEPILYNDILYTLPKLGVHKVCIGQILRIIQLLGTTPRLR 540
            ADSSQVPNLIPVLMFKLGRPLEPILYNDILYTLPKLGVHKVCIGQILRIIQLLGTTPRLR
Sbjct: 481  ADSSQVPNLIPVLMFKLGRPLEPILYNDILYTLPKLGVHKVCIGQILRIIQLLGTTPRLR 540

Query: 541  AVTLRLLTSLWEKQDRVYPELQRFMAVSDVPSLSVGKEVQWEKLIAKAASIRDICKQRPY 600
            AVTLRLLTSLWEKQDRVYPELQRFMAVSDVPSLSVGKEVQWEKLIAKAASIRDICKQRPY
Sbjct: 541  AVTLRLLTSLWEKQDRVYPELQRFMAVSDVPSLSVGKEVQWEKLIAKAASIRDICKQRPY 600

Query: 601  QHGADMLAAISQVLNECTKPDQATPAALVLQGLHALCQAEVVCIRSTWNALSPKLSCDTR 660
            QHGADMLAAISQVLNECTKPDQATPAALVLQGLHALCQAEVVCIRSTWNALSPKLSCDTR
Sbjct: 601  QHGADMLAAISQVLNECTKPDQATPAALVLQGLHALCQAEVVCIRSTWNALSPKLSCDTR 660

Query: 661  PLILKTLSELFSLVPSLTVNTTEYENFKVQVLSFLWTHTQNKDPIVANAAYRSLANFTAG 720
            PLILKTLSELFSLVPSLTVNTTEYENFKVQVLSFLWTHTQNKDPIVANAAYRSLANFTAG
Sbjct: 661  PLILKTLSELFSLVPSLTVNTTEYENFKVQVLSFLWTHTQNKDPIVANAAYRSLANFTAG 720

Query: 721  EHTILHLPEKIRPEIPIPEELDDDEDVEDVDLSVPGSCYLKLLSLTPPLVLPALEEFFTS 780
            EHTILHLPEKIRPEIPIPEELDDDEDVEDVDLSVPGSCYLKLLSLTPPLVLPALEEFFTS
Sbjct: 721  EHTILHLPEKIRPEIPIPEELDDDEDVEDVDLSVPGSCYLKLLSLTPPLVLPALEEFFTS 780

Query: 781  LVKQEMVNMPRGIYHSALKGGARSDQGKTVAGIPNFILKMYETNKQPGLKPGLAGGMLFC 840
            LVKQEMVNMPRGIYHSALKGGARSDQGKTVAGIPNFILKMYETNKQPGLKPGLAGGMLFC
Sbjct: 781  LVKQEMVNMPRGIYHSALKGGARSDQGKTVAGIPNFILKMYETNKQPGLKPGLAGGMLFC 840

Query: 841  YDVSMYQSKDGKPLNRLMASRGRSFKQTSLALVHEVHIQLSEWHRAIFLPQAWLAYMNRA 900
            YDVSMYQSKDGKPLNRLMASRGRSFKQTSLALVHEVHIQLSEWHRAIFLPQAWLAYMNRA
Sbjct: 841  YDVSMYQSKDGKPLNRLMASRGRSFKQTSLALVHEVHIQLSEWHRAIFLPQAWLAYMNRA 900

Query: 901  YHAILQGRLGELELQLKHGKEEPEEVQYKKSTAWLWVRDMLTDEITKAAAKESPVVKGNA 960
            YHAILQGRLGELELQLKHGKEEPEEVQYKKSTAWLWVRDMLTDEITKAAAKESPVVKGNA
Sbjct: 901  YHAILQGRLGELELQLKHGKEEPEEVQYKKSTAWLWVRDMLTDEITKAAAKESPVVKGNA 960

Query: 961  LLALSSLAVVVSRHEASLSSDSDGLLEVQPNFLSMKEWVSMVLDTLLVIVDSHYQPRGQL 1020
            LLALSSLAVVVSRHEASLSSDSDGLLEVQPNFLSMKEWVSMVLDTLLVIVDSHYQPRGQL
Sbjct: 961  LLALSSLAVVVSRHEASLSSDSDGLLEVQPNFLSMKEWVSMVLDTLLVIVDSHYQPRGQL 1020

Query: 1021 LSWFYYKSYSGENTASAIARSAAATALSLLVPVFIISCKEKVEEILNMLTARLPGKPSAD 1080
            LSWFYYKSYSGENTASAIARSAAATALSLLVPVFIISCKEKVEEILNMLTARLPGKPSAD
Sbjct: 1021 LSWFYYKSYSGENTASAIARSAAATALSLLVPVFIISCKEKVEEILNMLTARLPGKPSAD 1080

Query: 1081 ESQAVQIHMGLALGMFLSRLCEEKLSDISGQEMNLLLMKSLDALENCCFDTSLEYNTGCI 1140
            ESQAVQIHMGLALGMFLSRLCEEKLSDISGQEMNLLLMKSLDALENCCFDTSLEYNTGCI
Sbjct: 1081 ESQAVQIHMGLALGMFLSRLCEEKLSDISGQEMNLLLMKSLDALENCCFDTSLEYNTGCI 1140

Query: 1141 LGVGLVLSLMSHSSQMQSRVHVAALLRKLSAHVDDSGSQSRTFQEVLAYTLSCVCTSAFS 1200
            LGVGLVLSLMSHSSQMQSRVHVAALLRKLSAHVDDSGSQSRTFQEVLAYTLSCVCTSAFS
Sbjct: 1141 LGVGLVLSLMSHSSQMQSRVHVAALLRKLSAHVDDSGSQSRTFQEVLAYTLSCVCTSAFS 1200

Query: 1201 AGIIEATEAEDVMNKLRLLVENSQQTSGFALALGNIVHGLSVCGHGKAEDLGSKLLPAWI 1260
            AGIIEATEAEDVMNKLRLLVENSQQTSGFALALGNIVHGLSVCGHGKAEDLGSKLLPAWI
Sbjct: 1201 AGIIEATEAEDVMNKLRLLVENSQQTSGFALALGNIVHGLSVCGHGKAEDLGSKLLPAWI 1260

Query: 1261 RIVLTEGTPTMLCLAALHGMVALVGSEGDVMQLKSEAIQTSHFQGRLNEVIRTLTQVISV 1320
            RIVLTEGTPTMLCLAALHGMVALVGSEGDVMQLKSEAIQTSHFQGRLNEVIRTLTQVISV
Sbjct: 1261 RIVLTEGTPTMLCLAALHGMVALVGSEGDVMQLKSEAIQTSHFQGRLNEVIRTLTQVISV 1320

Query: 1321 SGVIGLQSNAVWLLGHLHLSTLSSSQSRASVPTDYSYLPESSFIGAAIGFFITGGKKGPE 1380
            SGVIGLQSNAVWLLGHLHLSTLSSSQSRASVPTDYSYLPESSFIGAAIGFFITGGKKGPE
Sbjct: 1321 SGVIGLQSNAVWLLGHLHLSTLSSSQSRASVPTDYSYLPESSFIGAAIGFFITGGKKGPE 1380

Query: 1381 SVPPSLLKVVMKPIATVGESYQYPPVNWAALLSPLMRLNFGEEIQQLCLEIMVTQAQSSQ 1440
            SVPPSLLKVVMKPIATVGESYQYPPVNWAALLSPLMRLNFGEEIQQLCLEIMVTQAQSSQ
Sbjct: 1381 SVPPSLLKVVMKPIATVGESYQYPPVNWAALLSPLMRLNFGEEIQQLCLEIMVTQAQSSQ 1440

Query: 1441 NAAALLGLWVTPPLIHSLSLNTKRYLLISAPLWIKHISDEQILGFVENLMVAVFKAASPL 1500
            NAAALLGLWVTPPLIHSLSLNTKRYLLISAPLWIKHISDEQILGFVENLMVAVFKAASPL
Sbjct: 1441 NAAALLGLWVTPPLIHSLSLNTKRYLLISAPLWIKHISDEQILGFVENLMVAVFKAASPL 1500

Query: 1501 GSPELCPSALHGLSQAMKLPSPAHHLWSLLSEATGKIFDLLPNKIRRKDLELYISIAKCL 1560
            GSPELCPSALHGLSQAMKLPSPAHHLWSLLSEATGKIFDLLPNKIRRKDLELYISIAKCL
Sbjct: 1501 GSPELCPSALHGLSQAMKLPSPAHHLWSLLSEATGKIFDLLPNKIRRKDLELYISIAKCL 1560

Query: 1561 LEMTDDDANRIAQVTKSNIEKAAFVKLYLVSQGRFPLVNLTDMLSVAVQHREKEVLAWMI 1620
            LEMTDDDANRIAQVTKSNIEKAAFVKLYLVSQGRFPLVNLTDMLSVAVQHREKEVLAWMI
Sbjct: 1561 LEMTDDDANRIAQVTKSNIEKAAFVKLYLVSQGRFPLVNLTDMLSVAVQHREKEVLAWMI 1620

Query: 1621 LHSLYQARIVSHANTGVLKRMEWLLELMGYIRNVAYQSTSFHNTALDKALDFFLLIFATA 1680
            LHSLYQARIVSHANTGVLKRMEWLLELMGYIRNVAYQSTSFHNTALDKALDFFLLIFATA
Sbjct: 1621 LHSLYQARIVSHANTGVLKRMEWLLELMGYIRNVAYQSTSFHNTALDKALDFFLLIFATA 1680

Query: 1681 VVAWADHTAPLLLGLSASWLPWHQENGPAGPVPSFLGRSPMHRVTLQEVLTLLPNSMALL 1740
            VVAWADHTAPLLLGLSASWLPWHQENGPAGPVPSFLGRSPMHRVTLQEVLTLLPNSMALL
Sbjct: 1681 VVAWADHTAPLLLGLSASWLPWHQENGPAGPVPSFLGRSPMHRVTLQEVLTLLPNSMALL 1740

Query: 1741 LQKEPWKEQTQKFIDWLFSIMESPKEALSAQSRDLLKATLLSLRVLPEFKKKAVWTRAYG 1800
            LQKEPWKEQTQKFIDWLFSIMESPKEALSAQSRDLLKATLLSLRVLPEFKKKAVWTRAYG
Sbjct: 1741 LQKEPWKEQTQKFIDWLFSIMESPKEALSAQSRDLLKATLLSLRVLPEFKKKAVWTRAYG 1800

Query: 1801 W 1801
            W
Sbjct: 1801 W 1801


>gi|18644886 forkhead box P1 isoform 1 [Homo sapiens]
          Length = 677

 Score = 32.7 bits (73), Expect = 3.3
 Identities = 41/181 (22%), Positives = 75/181 (41%), Gaps = 35/181 (19%)

Query: 185 PSQLQEYAKLRLALLKVLLQPQVLCDKDQPSILEQQILQLCCDIVPCLQVKDLIQTTEAM 244
           P +  +   L++ +   ++ PQV+  +    IL+QQ+L          Q++ L+Q  +A+
Sbjct: 84  PKRNDKQPALQVPVSVAMMTPQVITPQQMQQILQQQVLS-------PQQLQVLLQQQQAL 136

Query: 245 MFIEEVCLSLLRHPVFWKIQLTQMSLQLLCVSEVSLKITGECSSSIHLLEHSVELLKEDF 304
           M  ++      +   F+K Q  Q+ LQLL                    +H+ +  KE  
Sbjct: 137 MLQQQ------QLQEFYKKQQEQLQLQLL------------------QQQHAGKQPKEQQ 172

Query: 305 PVELVIIGIALLLLQTPASQQKPILNLALKLLSVTEDQKIPKSSLLLVMPILQILSSTAL 364
            V    +     LLQ    QQ+ +L+L  + L   +    P    L + P+ Q +  T L
Sbjct: 173 QVATQQLAFQQQLLQMQQLQQQHLLSLQRQGLLTIQ----PGQPALPLQPLAQGMIPTEL 228

Query: 365 E 365
           +
Sbjct: 229 Q 229


>gi|189083802 myosin VIIA isoform 2 [Homo sapiens]
          Length = 2175

 Score = 32.7 bits (73), Expect = 3.3
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)

Query: 899  RAYHAILQGRLGELELQLKHGKEEPEEVQYKKSTAWLWVRDMLTDEITKAAAKESPVVKG 958
            + Y   LQ   GE E QL  G+++   V++K     L  +  LT+E+TK        V+G
Sbjct: 1081 KTYKRELQALQGEGEAQLPEGQKK-SSVRHKLVHLTLKKKSKLTEEVTKRLHDGESTVQG 1139

Query: 959  NALL 962
            N++L
Sbjct: 1140 NSML 1143


>gi|189083800 myosin VIIA isoform 3 [Homo sapiens]
          Length = 1204

 Score = 32.7 bits (73), Expect = 3.3
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)

Query: 899  RAYHAILQGRLGELELQLKHGKEEPEEVQYKKSTAWLWVRDMLTDEITKAAAKESPVVKG 958
            + Y   LQ   GE E QL  G+++   V++K     L  +  LT+E+TK        V+G
Sbjct: 1081 KTYKRELQALQGEGEAQLPEGQKK-SSVRHKLVHLTLKKKSKLTEEVTKRLHDGESTVQG 1139

Query: 959  NALL 962
            N++L
Sbjct: 1140 NSML 1143


>gi|189083798 myosin VIIA isoform 1 [Homo sapiens]
          Length = 2215

 Score = 32.7 bits (73), Expect = 3.3
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)

Query: 899  RAYHAILQGRLGELELQLKHGKEEPEEVQYKKSTAWLWVRDMLTDEITKAAAKESPVVKG 958
            + Y   LQ   GE E QL  G+++   V++K     L  +  LT+E+TK        V+G
Sbjct: 1081 KTYKRELQALQGEGEAQLPEGQKK-SSVRHKLVHLTLKKKSKLTEEVTKRLHDGESTVQG 1139

Query: 959  NALL 962
            N++L
Sbjct: 1140 NSML 1143


>gi|162287219 prune homolog 2 [Homo sapiens]
          Length = 3088

 Score = 32.3 bits (72), Expect = 4.3
 Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 1/75 (1%)

Query: 1060 EKVEEILNMLTARLPGKPSADES-QAVQIHMGLALGMFLSRLCEEKLSDISGQEMNLLLM 1118
            EK EEIL++L  + P  P  ++    +Q     A G+ + +   + L ++S  E+ + + 
Sbjct: 186  EKQEEILSILEEKFPNLPPREDIINVLQETQFSAQGLSIEQTMLKDLKELSDGEIKVAIS 245

Query: 1119 KSLDALENCCFDTSL 1133
                 LENC F +++
Sbjct: 246  TVSMNLENCLFHSNI 260


>gi|52693943 olfactory receptor, family 6, subfamily K, member 3
           [Homo sapiens]
          Length = 331

 Score = 32.3 bits (72), Expect = 4.3
 Identities = 45/191 (23%), Positives = 73/191 (38%), Gaps = 22/191 (11%)

Query: 155 LTAFFQQCPERLEVSCIQIMAPFLWYLYCEPSQLQEYAKLRLALLK---------VLLQP 205
           L  +F    E  E   +  MA   +   C P + Q     RL             ++L P
Sbjct: 115 LQMYFFHSLENSEGILLTTMAIDRYVAICNPLRYQMIMTPRLCAQLSAGSCLFGFLILLP 174

Query: 206 QVLCDKDQPSILEQQILQLCCDIVPCLQVKDLIQTTEAMMFIEEVCLSLLRHPVFWKIQL 265
           +++     P     QI Q+ CD+VP L    L  T  +M+ IE+V      H V   I  
Sbjct: 175 EIVMISTLPFCGPNQIHQIFCDLVPVL---SLACTDTSMILIEDVI-----HAVTIIITF 226

Query: 266 TQMSLQLLCVSEVSLKITGECSSSIHLLEHSVELLKEDFPVELVIIGIALLLLQTPASQQ 325
             ++L  + +  V L+I     SS    + +         V L+  G   L+    +   
Sbjct: 227 LIIALSYVRIVTVILRI-----SSSEGRQKAFSTCAGHLMVFLIFFGSVSLMYLRFSDTY 281

Query: 326 KPILNLALKLL 336
            P+L+ A+ L+
Sbjct: 282 PPVLDTAIALM 292


>gi|169208826 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 239

 Score = 32.0 bits (71), Expect = 5.6
 Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 2/83 (2%)

Query: 1700 LPWHQENGPAGPVPSFLGRSPMHRVTLQEVLTLLPNSMALLLQKEPWKEQTQKFIDWLFS 1759
            L W    GP  P  +F GR P   + L+  LT  P   +   ++   + ++  F    F+
Sbjct: 6    LRWGGSRGPPLPDGAFGGRDPRGFLALRSPLTAAPGRASRAQRRGRGRMRSLAFTG--FT 63

Query: 1760 IMESPKEALSAQSRDLLKATLLS 1782
                P +  S Q RD+L+A++ S
Sbjct: 64   RETRPLQLPSQQGRDVLRASVCS 86


>gi|153792393 G protein-coupled receptor 137C [Homo sapiens]
          Length = 429

 Score = 31.6 bits (70), Expect = 7.3
 Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 14/143 (9%)

Query: 179 WYLYCEPSQLQEYAKLRLALLKVLLQPQVLCDKDQPSILEQQILQLCCDIVPCLQVKDLI 238
           W LYC PS LQ      L LL + L  +V+C     + L++  + L    +    +  ++
Sbjct: 125 WLLYCFPSCLQFST---LCLLNLYL-AEVICKVRCATELDRHKILLHLGFIMASLLFLVV 180

Query: 239 QTTEAMMFIEEVCLSLLRHPVFWKIQLTQMSLQLLCVSEV---SLKITGECSSSIHLLEH 295
             T AM+   +V  + L+  VF +  L   SL +LC   +     KIT   S++++L   
Sbjct: 181 NLTCAMLVHGDVPENQLKWTVFVR-ALINDSLFILCAISLVCYICKITKMSSANVYLESK 239

Query: 296 SVELLKEDFPVELVIIGIALLLL 318
            + L       + V++G  ++LL
Sbjct: 240 GMSL------CQTVVVGSVVILL 256


>gi|23397642 GREB1 protein isoform a [Homo sapiens]
          Length = 1949

 Score = 31.6 bits (70), Expect = 7.3
 Identities = 29/120 (24%), Positives = 56/120 (46%), Gaps = 18/120 (15%)

Query: 129  TIRNHPHPLITVLEHRPDCWPVFLQQLT-AFFQQCPERLEVSCIQIMAPFLWYLYCE--- 184
            +++NH HP+++V     DC+     Q++  +    P  L +SC  ++   L    C+   
Sbjct: 1829 SLKNHDHPVLSV-----DCYLNLGSQISVCYVSSRPHSLNISCSDLLFSGLLLYLCDSFV 1883

Query: 185  -PSQLQEYAKLRLALLKVLLQPQVLCDKDQPSILEQQILQLCCDIVPCLQVKDLIQTTEA 243
              S L+++  L+ A L V+ Q +        S L Q +++L  +     +++D  QT  A
Sbjct: 1884 GASFLKKFHFLKGATLCVICQDR--------SSLRQTVVRLELEDEWQFRLRDEFQTANA 1935


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.134    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,863,405
Number of Sequences: 37866
Number of extensions: 2903787
Number of successful extensions: 7084
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 7075
Number of HSP's gapped (non-prelim): 21
length of query: 1801
length of database: 18,247,518
effective HSP length: 117
effective length of query: 1684
effective length of database: 13,817,196
effective search space: 23268158064
effective search space used: 23268158064
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 69 (31.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.