Guide to the Human Genome
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Search of human proteins with 110227601

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|110227601 coenzyme A synthase isoform a [Homo sapiens]
         (564 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|205277394 coenzyme A synthase isoform c [Homo sapiens]            1116   0.0  
gi|110227605 coenzyme A synthase isoform a [Homo sapiens]            1116   0.0  
gi|110227601 coenzyme A synthase isoform a [Homo sapiens]            1116   0.0  
gi|110227603 coenzyme A synthase isoform a [Homo sapiens]            1116   0.0  
gi|110227607 coenzyme A synthase isoform b [Homo sapiens]             533   e-151
gi|191252797 dephospho-CoA kinase domain containing [Homo sapiens]     99   8e-21
gi|191252795 dephospho-CoA kinase domain containing [Homo sapiens]     99   8e-21
gi|25777677 Ras association domain family 2 [Homo sapiens]             33   0.69 
gi|7661964 Ras association domain family 2 [Homo sapiens]              33   0.69 
gi|13376243 chromosome 10 open reading frame 119 [Homo sapiens]        31   2.6  
gi|223005897 GPN-loop GTPase 1 isoform a [Homo sapiens]                31   3.4  
gi|170016061 spectrin, beta, non-erythrocytic 5 [Homo sapiens]         31   3.4  
gi|10257429 immunity-related GTPase family, cinema [Homo sapiens]      30   5.9  
gi|117320513 coiled-coil domain containing 155 [Homo sapiens]          30   7.7  
gi|197116386 5'-nucleotidase domain containing 2 isoform 1 [Homo...    30   7.7  

>gi|205277394 coenzyme A synthase isoform c [Homo sapiens]
          Length = 593

 Score = 1116 bits (2886), Expect = 0.0
 Identities = 564/564 (100%), Positives = 564/564 (100%)

Query: 1   MAVFRSGLLVLTTPLASLAPRLASILTSAARLVNHTLYVHLQPGMSLEGPAQPQSSPVQA 60
           MAVFRSGLLVLTTPLASLAPRLASILTSAARLVNHTLYVHLQPGMSLEGPAQPQSSPVQA
Sbjct: 30  MAVFRSGLLVLTTPLASLAPRLASILTSAARLVNHTLYVHLQPGMSLEGPAQPQSSPVQA 89

Query: 61  TFEVLDFITHLYAGADVHRHLDVRILLTNIRTKSTFLPPLPTSVQNLAHPPEVVLTDFQT 120
           TFEVLDFITHLYAGADVHRHLDVRILLTNIRTKSTFLPPLPTSVQNLAHPPEVVLTDFQT
Sbjct: 90  TFEVLDFITHLYAGADVHRHLDVRILLTNIRTKSTFLPPLPTSVQNLAHPPEVVLTDFQT 149

Query: 121 LDGSQYNPVKQQLVRYATSCYSCCPRLASVLLYSDYGIGEVPVEPLDVPLPSTIRPASPV 180
           LDGSQYNPVKQQLVRYATSCYSCCPRLASVLLYSDYGIGEVPVEPLDVPLPSTIRPASPV
Sbjct: 150 LDGSQYNPVKQQLVRYATSCYSCCPRLASVLLYSDYGIGEVPVEPLDVPLPSTIRPASPV 209

Query: 181 AGSPKQPVRGYYRGAVGGTFDRLHNAHKVLLSVACILAQEQLVVGVADKDLLKSKLLPEL 240
           AGSPKQPVRGYYRGAVGGTFDRLHNAHKVLLSVACILAQEQLVVGVADKDLLKSKLLPEL
Sbjct: 210 AGSPKQPVRGYYRGAVGGTFDRLHNAHKVLLSVACILAQEQLVVGVADKDLLKSKLLPEL 269

Query: 241 LQPYTERVEHLSEFLVDIKPSLTFDVIPLLDPYGPAGSDPSLEFLVVSEETYRGGMAINR 300
           LQPYTERVEHLSEFLVDIKPSLTFDVIPLLDPYGPAGSDPSLEFLVVSEETYRGGMAINR
Sbjct: 270 LQPYTERVEHLSEFLVDIKPSLTFDVIPLLDPYGPAGSDPSLEFLVVSEETYRGGMAINR 329

Query: 301 FRLENDLEELALYQIQLLKDLRHTENEEDKVSSSSFRQRMLGNLLRPPYERPELPTCLYV 360
           FRLENDLEELALYQIQLLKDLRHTENEEDKVSSSSFRQRMLGNLLRPPYERPELPTCLYV
Sbjct: 330 FRLENDLEELALYQIQLLKDLRHTENEEDKVSSSSFRQRMLGNLLRPPYERPELPTCLYV 389

Query: 361 IGLTGISGSGKSSIAQRLKGLGAFVIDSDHLGHRAYAPGGPAYQPVVEAFGTDILHKDGI 420
           IGLTGISGSGKSSIAQRLKGLGAFVIDSDHLGHRAYAPGGPAYQPVVEAFGTDILHKDGI
Sbjct: 390 IGLTGISGSGKSSIAQRLKGLGAFVIDSDHLGHRAYAPGGPAYQPVVEAFGTDILHKDGI 449

Query: 421 INRKVLGSRVFGNKKQLKILTDIMWPIIAKLAREEMDRAVAEGKRVCVIDAAVLLEAGWQ 480
           INRKVLGSRVFGNKKQLKILTDIMWPIIAKLAREEMDRAVAEGKRVCVIDAAVLLEAGWQ
Sbjct: 450 INRKVLGSRVFGNKKQLKILTDIMWPIIAKLAREEMDRAVAEGKRVCVIDAAVLLEAGWQ 509

Query: 481 NLVHEVWTAVIPETEAVRRIVERDGLSEAAAQSRLQSQMSGQQLVEQSHVVLSTLWEPHI 540
           NLVHEVWTAVIPETEAVRRIVERDGLSEAAAQSRLQSQMSGQQLVEQSHVVLSTLWEPHI
Sbjct: 510 NLVHEVWTAVIPETEAVRRIVERDGLSEAAAQSRLQSQMSGQQLVEQSHVVLSTLWEPHI 569

Query: 541 TQRQVEKAWALLQKRIPKTHQALD 564
           TQRQVEKAWALLQKRIPKTHQALD
Sbjct: 570 TQRQVEKAWALLQKRIPKTHQALD 593


>gi|110227605 coenzyme A synthase isoform a [Homo sapiens]
          Length = 564

 Score = 1116 bits (2886), Expect = 0.0
 Identities = 564/564 (100%), Positives = 564/564 (100%)

Query: 1   MAVFRSGLLVLTTPLASLAPRLASILTSAARLVNHTLYVHLQPGMSLEGPAQPQSSPVQA 60
           MAVFRSGLLVLTTPLASLAPRLASILTSAARLVNHTLYVHLQPGMSLEGPAQPQSSPVQA
Sbjct: 1   MAVFRSGLLVLTTPLASLAPRLASILTSAARLVNHTLYVHLQPGMSLEGPAQPQSSPVQA 60

Query: 61  TFEVLDFITHLYAGADVHRHLDVRILLTNIRTKSTFLPPLPTSVQNLAHPPEVVLTDFQT 120
           TFEVLDFITHLYAGADVHRHLDVRILLTNIRTKSTFLPPLPTSVQNLAHPPEVVLTDFQT
Sbjct: 61  TFEVLDFITHLYAGADVHRHLDVRILLTNIRTKSTFLPPLPTSVQNLAHPPEVVLTDFQT 120

Query: 121 LDGSQYNPVKQQLVRYATSCYSCCPRLASVLLYSDYGIGEVPVEPLDVPLPSTIRPASPV 180
           LDGSQYNPVKQQLVRYATSCYSCCPRLASVLLYSDYGIGEVPVEPLDVPLPSTIRPASPV
Sbjct: 121 LDGSQYNPVKQQLVRYATSCYSCCPRLASVLLYSDYGIGEVPVEPLDVPLPSTIRPASPV 180

Query: 181 AGSPKQPVRGYYRGAVGGTFDRLHNAHKVLLSVACILAQEQLVVGVADKDLLKSKLLPEL 240
           AGSPKQPVRGYYRGAVGGTFDRLHNAHKVLLSVACILAQEQLVVGVADKDLLKSKLLPEL
Sbjct: 181 AGSPKQPVRGYYRGAVGGTFDRLHNAHKVLLSVACILAQEQLVVGVADKDLLKSKLLPEL 240

Query: 241 LQPYTERVEHLSEFLVDIKPSLTFDVIPLLDPYGPAGSDPSLEFLVVSEETYRGGMAINR 300
           LQPYTERVEHLSEFLVDIKPSLTFDVIPLLDPYGPAGSDPSLEFLVVSEETYRGGMAINR
Sbjct: 241 LQPYTERVEHLSEFLVDIKPSLTFDVIPLLDPYGPAGSDPSLEFLVVSEETYRGGMAINR 300

Query: 301 FRLENDLEELALYQIQLLKDLRHTENEEDKVSSSSFRQRMLGNLLRPPYERPELPTCLYV 360
           FRLENDLEELALYQIQLLKDLRHTENEEDKVSSSSFRQRMLGNLLRPPYERPELPTCLYV
Sbjct: 301 FRLENDLEELALYQIQLLKDLRHTENEEDKVSSSSFRQRMLGNLLRPPYERPELPTCLYV 360

Query: 361 IGLTGISGSGKSSIAQRLKGLGAFVIDSDHLGHRAYAPGGPAYQPVVEAFGTDILHKDGI 420
           IGLTGISGSGKSSIAQRLKGLGAFVIDSDHLGHRAYAPGGPAYQPVVEAFGTDILHKDGI
Sbjct: 361 IGLTGISGSGKSSIAQRLKGLGAFVIDSDHLGHRAYAPGGPAYQPVVEAFGTDILHKDGI 420

Query: 421 INRKVLGSRVFGNKKQLKILTDIMWPIIAKLAREEMDRAVAEGKRVCVIDAAVLLEAGWQ 480
           INRKVLGSRVFGNKKQLKILTDIMWPIIAKLAREEMDRAVAEGKRVCVIDAAVLLEAGWQ
Sbjct: 421 INRKVLGSRVFGNKKQLKILTDIMWPIIAKLAREEMDRAVAEGKRVCVIDAAVLLEAGWQ 480

Query: 481 NLVHEVWTAVIPETEAVRRIVERDGLSEAAAQSRLQSQMSGQQLVEQSHVVLSTLWEPHI 540
           NLVHEVWTAVIPETEAVRRIVERDGLSEAAAQSRLQSQMSGQQLVEQSHVVLSTLWEPHI
Sbjct: 481 NLVHEVWTAVIPETEAVRRIVERDGLSEAAAQSRLQSQMSGQQLVEQSHVVLSTLWEPHI 540

Query: 541 TQRQVEKAWALLQKRIPKTHQALD 564
           TQRQVEKAWALLQKRIPKTHQALD
Sbjct: 541 TQRQVEKAWALLQKRIPKTHQALD 564


>gi|110227601 coenzyme A synthase isoform a [Homo sapiens]
          Length = 564

 Score = 1116 bits (2886), Expect = 0.0
 Identities = 564/564 (100%), Positives = 564/564 (100%)

Query: 1   MAVFRSGLLVLTTPLASLAPRLASILTSAARLVNHTLYVHLQPGMSLEGPAQPQSSPVQA 60
           MAVFRSGLLVLTTPLASLAPRLASILTSAARLVNHTLYVHLQPGMSLEGPAQPQSSPVQA
Sbjct: 1   MAVFRSGLLVLTTPLASLAPRLASILTSAARLVNHTLYVHLQPGMSLEGPAQPQSSPVQA 60

Query: 61  TFEVLDFITHLYAGADVHRHLDVRILLTNIRTKSTFLPPLPTSVQNLAHPPEVVLTDFQT 120
           TFEVLDFITHLYAGADVHRHLDVRILLTNIRTKSTFLPPLPTSVQNLAHPPEVVLTDFQT
Sbjct: 61  TFEVLDFITHLYAGADVHRHLDVRILLTNIRTKSTFLPPLPTSVQNLAHPPEVVLTDFQT 120

Query: 121 LDGSQYNPVKQQLVRYATSCYSCCPRLASVLLYSDYGIGEVPVEPLDVPLPSTIRPASPV 180
           LDGSQYNPVKQQLVRYATSCYSCCPRLASVLLYSDYGIGEVPVEPLDVPLPSTIRPASPV
Sbjct: 121 LDGSQYNPVKQQLVRYATSCYSCCPRLASVLLYSDYGIGEVPVEPLDVPLPSTIRPASPV 180

Query: 181 AGSPKQPVRGYYRGAVGGTFDRLHNAHKVLLSVACILAQEQLVVGVADKDLLKSKLLPEL 240
           AGSPKQPVRGYYRGAVGGTFDRLHNAHKVLLSVACILAQEQLVVGVADKDLLKSKLLPEL
Sbjct: 181 AGSPKQPVRGYYRGAVGGTFDRLHNAHKVLLSVACILAQEQLVVGVADKDLLKSKLLPEL 240

Query: 241 LQPYTERVEHLSEFLVDIKPSLTFDVIPLLDPYGPAGSDPSLEFLVVSEETYRGGMAINR 300
           LQPYTERVEHLSEFLVDIKPSLTFDVIPLLDPYGPAGSDPSLEFLVVSEETYRGGMAINR
Sbjct: 241 LQPYTERVEHLSEFLVDIKPSLTFDVIPLLDPYGPAGSDPSLEFLVVSEETYRGGMAINR 300

Query: 301 FRLENDLEELALYQIQLLKDLRHTENEEDKVSSSSFRQRMLGNLLRPPYERPELPTCLYV 360
           FRLENDLEELALYQIQLLKDLRHTENEEDKVSSSSFRQRMLGNLLRPPYERPELPTCLYV
Sbjct: 301 FRLENDLEELALYQIQLLKDLRHTENEEDKVSSSSFRQRMLGNLLRPPYERPELPTCLYV 360

Query: 361 IGLTGISGSGKSSIAQRLKGLGAFVIDSDHLGHRAYAPGGPAYQPVVEAFGTDILHKDGI 420
           IGLTGISGSGKSSIAQRLKGLGAFVIDSDHLGHRAYAPGGPAYQPVVEAFGTDILHKDGI
Sbjct: 361 IGLTGISGSGKSSIAQRLKGLGAFVIDSDHLGHRAYAPGGPAYQPVVEAFGTDILHKDGI 420

Query: 421 INRKVLGSRVFGNKKQLKILTDIMWPIIAKLAREEMDRAVAEGKRVCVIDAAVLLEAGWQ 480
           INRKVLGSRVFGNKKQLKILTDIMWPIIAKLAREEMDRAVAEGKRVCVIDAAVLLEAGWQ
Sbjct: 421 INRKVLGSRVFGNKKQLKILTDIMWPIIAKLAREEMDRAVAEGKRVCVIDAAVLLEAGWQ 480

Query: 481 NLVHEVWTAVIPETEAVRRIVERDGLSEAAAQSRLQSQMSGQQLVEQSHVVLSTLWEPHI 540
           NLVHEVWTAVIPETEAVRRIVERDGLSEAAAQSRLQSQMSGQQLVEQSHVVLSTLWEPHI
Sbjct: 481 NLVHEVWTAVIPETEAVRRIVERDGLSEAAAQSRLQSQMSGQQLVEQSHVVLSTLWEPHI 540

Query: 541 TQRQVEKAWALLQKRIPKTHQALD 564
           TQRQVEKAWALLQKRIPKTHQALD
Sbjct: 541 TQRQVEKAWALLQKRIPKTHQALD 564


>gi|110227603 coenzyme A synthase isoform a [Homo sapiens]
          Length = 564

 Score = 1116 bits (2886), Expect = 0.0
 Identities = 564/564 (100%), Positives = 564/564 (100%)

Query: 1   MAVFRSGLLVLTTPLASLAPRLASILTSAARLVNHTLYVHLQPGMSLEGPAQPQSSPVQA 60
           MAVFRSGLLVLTTPLASLAPRLASILTSAARLVNHTLYVHLQPGMSLEGPAQPQSSPVQA
Sbjct: 1   MAVFRSGLLVLTTPLASLAPRLASILTSAARLVNHTLYVHLQPGMSLEGPAQPQSSPVQA 60

Query: 61  TFEVLDFITHLYAGADVHRHLDVRILLTNIRTKSTFLPPLPTSVQNLAHPPEVVLTDFQT 120
           TFEVLDFITHLYAGADVHRHLDVRILLTNIRTKSTFLPPLPTSVQNLAHPPEVVLTDFQT
Sbjct: 61  TFEVLDFITHLYAGADVHRHLDVRILLTNIRTKSTFLPPLPTSVQNLAHPPEVVLTDFQT 120

Query: 121 LDGSQYNPVKQQLVRYATSCYSCCPRLASVLLYSDYGIGEVPVEPLDVPLPSTIRPASPV 180
           LDGSQYNPVKQQLVRYATSCYSCCPRLASVLLYSDYGIGEVPVEPLDVPLPSTIRPASPV
Sbjct: 121 LDGSQYNPVKQQLVRYATSCYSCCPRLASVLLYSDYGIGEVPVEPLDVPLPSTIRPASPV 180

Query: 181 AGSPKQPVRGYYRGAVGGTFDRLHNAHKVLLSVACILAQEQLVVGVADKDLLKSKLLPEL 240
           AGSPKQPVRGYYRGAVGGTFDRLHNAHKVLLSVACILAQEQLVVGVADKDLLKSKLLPEL
Sbjct: 181 AGSPKQPVRGYYRGAVGGTFDRLHNAHKVLLSVACILAQEQLVVGVADKDLLKSKLLPEL 240

Query: 241 LQPYTERVEHLSEFLVDIKPSLTFDVIPLLDPYGPAGSDPSLEFLVVSEETYRGGMAINR 300
           LQPYTERVEHLSEFLVDIKPSLTFDVIPLLDPYGPAGSDPSLEFLVVSEETYRGGMAINR
Sbjct: 241 LQPYTERVEHLSEFLVDIKPSLTFDVIPLLDPYGPAGSDPSLEFLVVSEETYRGGMAINR 300

Query: 301 FRLENDLEELALYQIQLLKDLRHTENEEDKVSSSSFRQRMLGNLLRPPYERPELPTCLYV 360
           FRLENDLEELALYQIQLLKDLRHTENEEDKVSSSSFRQRMLGNLLRPPYERPELPTCLYV
Sbjct: 301 FRLENDLEELALYQIQLLKDLRHTENEEDKVSSSSFRQRMLGNLLRPPYERPELPTCLYV 360

Query: 361 IGLTGISGSGKSSIAQRLKGLGAFVIDSDHLGHRAYAPGGPAYQPVVEAFGTDILHKDGI 420
           IGLTGISGSGKSSIAQRLKGLGAFVIDSDHLGHRAYAPGGPAYQPVVEAFGTDILHKDGI
Sbjct: 361 IGLTGISGSGKSSIAQRLKGLGAFVIDSDHLGHRAYAPGGPAYQPVVEAFGTDILHKDGI 420

Query: 421 INRKVLGSRVFGNKKQLKILTDIMWPIIAKLAREEMDRAVAEGKRVCVIDAAVLLEAGWQ 480
           INRKVLGSRVFGNKKQLKILTDIMWPIIAKLAREEMDRAVAEGKRVCVIDAAVLLEAGWQ
Sbjct: 421 INRKVLGSRVFGNKKQLKILTDIMWPIIAKLAREEMDRAVAEGKRVCVIDAAVLLEAGWQ 480

Query: 481 NLVHEVWTAVIPETEAVRRIVERDGLSEAAAQSRLQSQMSGQQLVEQSHVVLSTLWEPHI 540
           NLVHEVWTAVIPETEAVRRIVERDGLSEAAAQSRLQSQMSGQQLVEQSHVVLSTLWEPHI
Sbjct: 481 NLVHEVWTAVIPETEAVRRIVERDGLSEAAAQSRLQSQMSGQQLVEQSHVVLSTLWEPHI 540

Query: 541 TQRQVEKAWALLQKRIPKTHQALD 564
           TQRQVEKAWALLQKRIPKTHQALD
Sbjct: 541 TQRQVEKAWALLQKRIPKTHQALD 564


>gi|110227607 coenzyme A synthase isoform b [Homo sapiens]
          Length = 269

 Score =  533 bits (1372), Expect = e-151
 Identities = 269/269 (100%), Positives = 269/269 (100%)

Query: 296 MAINRFRLENDLEELALYQIQLLKDLRHTENEEDKVSSSSFRQRMLGNLLRPPYERPELP 355
           MAINRFRLENDLEELALYQIQLLKDLRHTENEEDKVSSSSFRQRMLGNLLRPPYERPELP
Sbjct: 1   MAINRFRLENDLEELALYQIQLLKDLRHTENEEDKVSSSSFRQRMLGNLLRPPYERPELP 60

Query: 356 TCLYVIGLTGISGSGKSSIAQRLKGLGAFVIDSDHLGHRAYAPGGPAYQPVVEAFGTDIL 415
           TCLYVIGLTGISGSGKSSIAQRLKGLGAFVIDSDHLGHRAYAPGGPAYQPVVEAFGTDIL
Sbjct: 61  TCLYVIGLTGISGSGKSSIAQRLKGLGAFVIDSDHLGHRAYAPGGPAYQPVVEAFGTDIL 120

Query: 416 HKDGIINRKVLGSRVFGNKKQLKILTDIMWPIIAKLAREEMDRAVAEGKRVCVIDAAVLL 475
           HKDGIINRKVLGSRVFGNKKQLKILTDIMWPIIAKLAREEMDRAVAEGKRVCVIDAAVLL
Sbjct: 121 HKDGIINRKVLGSRVFGNKKQLKILTDIMWPIIAKLAREEMDRAVAEGKRVCVIDAAVLL 180

Query: 476 EAGWQNLVHEVWTAVIPETEAVRRIVERDGLSEAAAQSRLQSQMSGQQLVEQSHVVLSTL 535
           EAGWQNLVHEVWTAVIPETEAVRRIVERDGLSEAAAQSRLQSQMSGQQLVEQSHVVLSTL
Sbjct: 181 EAGWQNLVHEVWTAVIPETEAVRRIVERDGLSEAAAQSRLQSQMSGQQLVEQSHVVLSTL 240

Query: 536 WEPHITQRQVEKAWALLQKRIPKTHQALD 564
           WEPHITQRQVEKAWALLQKRIPKTHQALD
Sbjct: 241 WEPHITQRQVEKAWALLQKRIPKTHQALD 269


>gi|191252797 dephospho-CoA kinase domain containing [Homo sapiens]
          Length = 231

 Score = 99.4 bits (246), Expect = 8e-21
 Identities = 62/190 (32%), Positives = 102/190 (53%), Gaps = 3/190 (1%)

Query: 358 LYVIGLTGISGSGKSSIAQRLKGLGAFVIDSDHLGHRAYAPGGPAYQPVVEAFGTDILHK 417
           ++++GLTG   SGKSS+ Q  + LG  VID D +      PG PA++ +VE FGT++L +
Sbjct: 1   MFLVGLTGGIASGKSSVIQVFQQLGCAVIDVDVMARHVVQPGYPAHRRIVEVFGTEVLLE 60

Query: 418 DGIINRKVLGSRVFGNKKQLKILTDIMWPIIAKLAREEMDRAVAEGKRVCVIDAAVLLEA 477
           +G INRKVLG  +F    + ++L  I  P I K   +E  +    G R  ++D  +L E 
Sbjct: 61  NGDINRKVLGDLIFNQPDRRQLLNAITHPEIRKEMMKETFKYFLRGYRYVILDIPLLFET 120

Query: 478 G--WQNLVHEVWTAVIPETEAVRRIVERDGLSEAAAQSRLQSQMSGQQLVEQSHVVLSTL 535
               + + H V      +T+ + R++ R+ L+   A++R+ +Q+        +  VL   
Sbjct: 121 KKLLKYMKHTVVVYCDRDTQ-LARLMRRNSLNRKDAEARINAQLPLTDKARMARHVLDNS 179

Query: 536 WEPHITQRQV 545
            E  +T+RQV
Sbjct: 180 GEWSVTKRQV 189


>gi|191252795 dephospho-CoA kinase domain containing [Homo sapiens]
          Length = 231

 Score = 99.4 bits (246), Expect = 8e-21
 Identities = 62/190 (32%), Positives = 102/190 (53%), Gaps = 3/190 (1%)

Query: 358 LYVIGLTGISGSGKSSIAQRLKGLGAFVIDSDHLGHRAYAPGGPAYQPVVEAFGTDILHK 417
           ++++GLTG   SGKSS+ Q  + LG  VID D +      PG PA++ +VE FGT++L +
Sbjct: 1   MFLVGLTGGIASGKSSVIQVFQQLGCAVIDVDVMARHVVQPGYPAHRRIVEVFGTEVLLE 60

Query: 418 DGIINRKVLGSRVFGNKKQLKILTDIMWPIIAKLAREEMDRAVAEGKRVCVIDAAVLLEA 477
           +G INRKVLG  +F    + ++L  I  P I K   +E  +    G R  ++D  +L E 
Sbjct: 61  NGDINRKVLGDLIFNQPDRRQLLNAITHPEIRKEMMKETFKYFLRGYRYVILDIPLLFET 120

Query: 478 G--WQNLVHEVWTAVIPETEAVRRIVERDGLSEAAAQSRLQSQMSGQQLVEQSHVVLSTL 535
               + + H V      +T+ + R++ R+ L+   A++R+ +Q+        +  VL   
Sbjct: 121 KKLLKYMKHTVVVYCDRDTQ-LARLMRRNSLNRKDAEARINAQLPLTDKARMARHVLDNS 179

Query: 536 WEPHITQRQV 545
            E  +T+RQV
Sbjct: 180 GEWSVTKRQV 189


>gi|25777677 Ras association domain family 2 [Homo sapiens]
          Length = 326

 Score = 33.1 bits (74), Expect = 0.69
 Identities = 16/56 (28%), Positives = 32/56 (57%), Gaps = 9/56 (16%)

Query: 296 MAINRFRLENDLEELALYQIQLLKDLRHTENEEDKVSSSSFRQRMLGNLLRPPYER 351
           + +N+F++EN  EE ALY +       HT  E+ K+ ++ +   ++  +L+ P E+
Sbjct: 207 LLLNKFKIENSAEEFALYVV-------HTSGEKQKLKATDY--PLIARILQGPCEQ 253


>gi|7661964 Ras association domain family 2 [Homo sapiens]
          Length = 326

 Score = 33.1 bits (74), Expect = 0.69
 Identities = 16/56 (28%), Positives = 32/56 (57%), Gaps = 9/56 (16%)

Query: 296 MAINRFRLENDLEELALYQIQLLKDLRHTENEEDKVSSSSFRQRMLGNLLRPPYER 351
           + +N+F++EN  EE ALY +       HT  E+ K+ ++ +   ++  +L+ P E+
Sbjct: 207 LLLNKFKIENSAEEFALYVV-------HTSGEKQKLKATDY--PLIARILQGPCEQ 253


>gi|13376243 chromosome 10 open reading frame 119 [Homo sapiens]
          Length = 642

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 6/90 (6%)

Query: 13  TPLASLAPRLASILTSAARLVNHTLYVHLQPGMS----LEGPAQPQSSPVQATFEVLDFI 68
           +P ASL PR+  IL    + +N  L   L    S           + SPV+A  E+L F+
Sbjct: 298 SPPASLVPRIHVILAQKLQHINPLLPACLNKEESKTCKFVSSFMSELSPVRA--ELLGFL 355

Query: 69  THLYAGADVHRHLDVRILLTNIRTKSTFLP 98
           TH   G  +     +  L++ + T+   LP
Sbjct: 356 THALLGDSLAAEYLILHLISTVYTRRDVLP 385


>gi|223005897 GPN-loop GTPase 1 isoform a [Homo sapiens]
          Length = 388

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 15/72 (20%)

Query: 352 PELPTCLYVIGLTGISGSGKSSIAQRL------KGLGAFVIDSDHLGHRAYAPGG----- 400
           P  P CL V+G+   +GSGK++  QRL      +G   +VI+ D   H    P       
Sbjct: 30  PRHPVCLLVLGM---AGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRD 86

Query: 401 -PAYQPVVEAFG 411
              Y+ V++ +G
Sbjct: 87  TVKYKEVMKQYG 98


>gi|170016061 spectrin, beta, non-erythrocytic 5 [Homo sapiens]
          Length = 3639

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 7/61 (11%)

Query: 502  ERDGLSEAAAQSRLQSQ---MSGQQLVEQSHV----VLSTLWEPHITQRQVEKAWALLQK 554
            + + L +   + RLQ+Q     GQQLV+ SH     V   L E     +++E+AWAL  +
Sbjct: 3320 QHEELGQEIRECRLQAQDLRQEGQQLVDNSHFMSAEVTECLQELEGRLQELEEAWALRWQ 3379

Query: 555  R 555
            R
Sbjct: 3380 R 3380


>gi|10257429 immunity-related GTPase family, cinema [Homo sapiens]
          Length = 463

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 13/23 (56%), Positives = 18/23 (78%)

Query: 361 IGLTGISGSGKSSIAQRLKGLGA 383
           +G+TG SG+GKSS+   L+GL A
Sbjct: 57  VGVTGESGAGKSSLINALRGLEA 79


>gi|117320513 coiled-coil domain containing 155 [Homo sapiens]
          Length = 562

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 35/162 (21%), Positives = 69/162 (42%), Gaps = 29/162 (17%)

Query: 426 LGSRVFGNKKQLKILTDIMWPIIAKLAREEMD------RAVAEGKRVCVIDAAVLLEAGW 479
           LG  +   +KQL      +    AK   EE++      R++ E  R  +  A    E   
Sbjct: 197 LGEEILALRKQLHSTQQALQ--FAKAMDEELEDLKTLARSLEEQNRSLLAQARQA-EKEQ 253

Query: 480 QNLVHEVWTAVIPETEAVRRIVERDGLSEAAAQSRLQSQMSGQQLVEQSHVV-------- 531
           Q+LV E+ T    + E  + + ERDG+ + + +  ++     +QL E  H++        
Sbjct: 254 QHLVAEMETL---QEENGKLLAERDGVKKRSQELAMEKDTLKRQLFECEHLICQRDTILS 310

Query: 532 ---------LSTLWEPHITQRQVEKAWALLQKRIPKTHQALD 564
                      TL E  +T +++    + L++++ +T++  D
Sbjct: 311 ERTRDVESLAQTLEEYRVTTQELRLEISRLEEQLSQTYEGPD 352


>gi|197116386 5'-nucleotidase domain containing 2 isoform 1 [Homo
           sapiens]
          Length = 557

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 11/66 (16%)

Query: 43  PGMSLEGPAQPQSSPVQATFEVLDFITHLYAGADVHRHLDVRILLTNIRTKSTFLPPLPT 102
           PG     P  P+S+P QA     D   HL+A     R+ D+R L+ ++      LPP   
Sbjct: 37  PGPGAHCPGVPRSAPAQAPTSGADLSAHLWA-----RYQDMRRLVHDL------LPPEVC 85

Query: 103 SVQNLA 108
           S+ N A
Sbjct: 86  SLLNPA 91


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.136    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,244,787
Number of Sequences: 37866
Number of extensions: 1043220
Number of successful extensions: 3190
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 3181
Number of HSP's gapped (non-prelim): 18
length of query: 564
length of database: 18,247,518
effective HSP length: 108
effective length of query: 456
effective length of database: 14,157,990
effective search space: 6456043440
effective search space used: 6456043440
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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