Search of human proteins with 148237372

Search of human proteins with 148237372

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|148237372 fucosyltransferase 2 [Homo sapiens]
         (343 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|148224427 fucosyltransferase 2 [Homo sapiens]                      714   0.0  
gi|148237372 fucosyltransferase 2 [Homo sapiens]                      714   0.0  
gi|4503805 fucosyltransferase 1 [Homo sapiens]                        422   e-118
gi|239756662 PREDICTED: hypothetical protein [Homo sapiens]            28   9.1  
gi|169210099 PREDICTED: hypothetical protein [Homo sapiens]            28   9.1  

>gi|148224427 fucosyltransferase 2 [Homo sapiens]
          Length = 343

 Score =  714 bits (1843), Expect = 0.0
 Identities = 343/343 (100%), Positives = 343/343 (100%)

Query: 1   MLVVQMPFSFPMAHFILFVFTVSTIFHVQQRLAKIQAMWELPVQIPVLASTSKALGPSQL 60
           MLVVQMPFSFPMAHFILFVFTVSTIFHVQQRLAKIQAMWELPVQIPVLASTSKALGPSQL
Sbjct: 1   MLVVQMPFSFPMAHFILFVFTVSTIFHVQQRLAKIQAMWELPVQIPVLASTSKALGPSQL 60

Query: 61  RGMWTINAIGRLGNQMGEYATLYALAKMNGRPAFIPAQMHSTLAPIFRITLPVLHSATAS 120
           RGMWTINAIGRLGNQMGEYATLYALAKMNGRPAFIPAQMHSTLAPIFRITLPVLHSATAS
Sbjct: 61  RGMWTINAIGRLGNQMGEYATLYALAKMNGRPAFIPAQMHSTLAPIFRITLPVLHSATAS 120

Query: 121 RIPWQNYHLNDWMEEEYRHIPGEYVRFTGYPCSWTFYHHLRQEILQEFTLHDHVREEAQK 180
           RIPWQNYHLNDWMEEEYRHIPGEYVRFTGYPCSWTFYHHLRQEILQEFTLHDHVREEAQK
Sbjct: 121 RIPWQNYHLNDWMEEEYRHIPGEYVRFTGYPCSWTFYHHLRQEILQEFTLHDHVREEAQK 180

Query: 181 FLRGLQVNGSRPGTFVGVHVRRGDYVHVMPKVWKGVVADRRYLQQALDWFRARYSSLIFV 240
           FLRGLQVNGSRPGTFVGVHVRRGDYVHVMPKVWKGVVADRRYLQQALDWFRARYSSLIFV
Sbjct: 181 FLRGLQVNGSRPGTFVGVHVRRGDYVHVMPKVWKGVVADRRYLQQALDWFRARYSSLIFV 240

Query: 241 VTSNGMAWCRENIDTSHGDVVFAGDGIEGSPAKDFALLTQCNHTIMTIGTFGIWAAYLTG 300
           VTSNGMAWCRENIDTSHGDVVFAGDGIEGSPAKDFALLTQCNHTIMTIGTFGIWAAYLTG
Sbjct: 241 VTSNGMAWCRENIDTSHGDVVFAGDGIEGSPAKDFALLTQCNHTIMTIGTFGIWAAYLTG 300

Query: 301 GDTIYLANYTLPDSPFLKIFKPEAAFLPEWTGIAADLSPLLKH 343
           GDTIYLANYTLPDSPFLKIFKPEAAFLPEWTGIAADLSPLLKH
Sbjct: 301 GDTIYLANYTLPDSPFLKIFKPEAAFLPEWTGIAADLSPLLKH 343


>gi|148237372 fucosyltransferase 2 [Homo sapiens]
          Length = 343

 Score =  714 bits (1843), Expect = 0.0
 Identities = 343/343 (100%), Positives = 343/343 (100%)

Query: 1   MLVVQMPFSFPMAHFILFVFTVSTIFHVQQRLAKIQAMWELPVQIPVLASTSKALGPSQL 60
           MLVVQMPFSFPMAHFILFVFTVSTIFHVQQRLAKIQAMWELPVQIPVLASTSKALGPSQL
Sbjct: 1   MLVVQMPFSFPMAHFILFVFTVSTIFHVQQRLAKIQAMWELPVQIPVLASTSKALGPSQL 60

Query: 61  RGMWTINAIGRLGNQMGEYATLYALAKMNGRPAFIPAQMHSTLAPIFRITLPVLHSATAS 120
           RGMWTINAIGRLGNQMGEYATLYALAKMNGRPAFIPAQMHSTLAPIFRITLPVLHSATAS
Sbjct: 61  RGMWTINAIGRLGNQMGEYATLYALAKMNGRPAFIPAQMHSTLAPIFRITLPVLHSATAS 120

Query: 121 RIPWQNYHLNDWMEEEYRHIPGEYVRFTGYPCSWTFYHHLRQEILQEFTLHDHVREEAQK 180
           RIPWQNYHLNDWMEEEYRHIPGEYVRFTGYPCSWTFYHHLRQEILQEFTLHDHVREEAQK
Sbjct: 121 RIPWQNYHLNDWMEEEYRHIPGEYVRFTGYPCSWTFYHHLRQEILQEFTLHDHVREEAQK 180

Query: 181 FLRGLQVNGSRPGTFVGVHVRRGDYVHVMPKVWKGVVADRRYLQQALDWFRARYSSLIFV 240
           FLRGLQVNGSRPGTFVGVHVRRGDYVHVMPKVWKGVVADRRYLQQALDWFRARYSSLIFV
Sbjct: 181 FLRGLQVNGSRPGTFVGVHVRRGDYVHVMPKVWKGVVADRRYLQQALDWFRARYSSLIFV 240

Query: 241 VTSNGMAWCRENIDTSHGDVVFAGDGIEGSPAKDFALLTQCNHTIMTIGTFGIWAAYLTG 300
           VTSNGMAWCRENIDTSHGDVVFAGDGIEGSPAKDFALLTQCNHTIMTIGTFGIWAAYLTG
Sbjct: 241 VTSNGMAWCRENIDTSHGDVVFAGDGIEGSPAKDFALLTQCNHTIMTIGTFGIWAAYLTG 300

Query: 301 GDTIYLANYTLPDSPFLKIFKPEAAFLPEWTGIAADLSPLLKH 343
           GDTIYLANYTLPDSPFLKIFKPEAAFLPEWTGIAADLSPLLKH
Sbjct: 301 GDTIYLANYTLPDSPFLKIFKPEAAFLPEWTGIAADLSPLLKH 343


>gi|4503805 fucosyltransferase 1 [Homo sapiens]
          Length = 365

 Score =  422 bits (1085), Expect = e-118
 Identities = 199/294 (67%), Positives = 233/294 (79%), Gaps = 2/294 (0%)

Query: 49  ASTSKALGPSQLRGMWTINAIGRLGNQMGEYATLYALAKMNGRPAFIPAQMHSTLAPIFR 108
           AS+S    P+ L G WT+   GR GNQMG+YATL ALA++NGR AFI   MH+ LAP+FR
Sbjct: 66  ASSSCPQHPASLSGTWTVYPNGRFGNQMGQYATLLALAQLNGRRAFILPAMHAALAPVFR 125

Query: 109 ITLPVLHSATASRIPWQNYHLNDWMEEEYRHIPGEYVRFTGYPCSWTFYHHLRQEILQEF 168
           ITLPVL     SR PW+   L+DWM EEY  +   +++ +G+PCSWTF+HHLR++I +EF
Sbjct: 126 ITLPVLAPEVDSRTPWRELQLHDWMSEEYADLRDPFLKLSGFPCSWTFFHHLREQIRREF 185

Query: 169 TLHDHVREEAQKFLRGLQVN--GSRPGTFVGVHVRRGDYVHVMPKVWKGVVADRRYLQQA 226
           TLHDH+REEAQ  L  L++   G RP TFVGVHVRRGDY+ VMP+ WKGVV D  YL+QA
Sbjct: 186 TLHDHLREEAQSVLGQLRLGRTGDRPRTFVGVHVRRGDYLQVMPQRWKGVVGDSAYLRQA 245

Query: 227 LDWFRARYSSLIFVVTSNGMAWCRENIDTSHGDVVFAGDGIEGSPAKDFALLTQCNHTIM 286
           +DWFRAR+ + +FVVTSNGM WC+ENIDTS GDV FAGDG E +P KDFALLTQCNHTIM
Sbjct: 246 MDWFRARHEAPVFVVTSNGMEWCKENIDTSQGDVTFAGDGQEATPWKDFALLTQCNHTIM 305

Query: 287 TIGTFGIWAAYLTGGDTIYLANYTLPDSPFLKIFKPEAAFLPEWTGIAADLSPL 340
           TIGTFG WAAYL GGDT+YLAN+TLPDS FLKIFKPEAAFLPEW GI ADLSPL
Sbjct: 306 TIGTFGFWAAYLAGGDTVYLANFTLPDSEFLKIFKPEAAFLPEWVGINADLSPL 359


>gi|239756662 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 418

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 14/29 (48%), Positives = 17/29 (58%)

Query: 92  PAFIPAQMHSTLAPIFRITLPVLHSATAS 120
           P   PAQ    LAP+FRI  PV  + TA+
Sbjct: 259 PGSAPAQRVRVLAPVFRICSPVPWTGTAT 287


>gi|169210099 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 413

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 14/29 (48%), Positives = 17/29 (58%)

Query: 92  PAFIPAQMHSTLAPIFRITLPVLHSATAS 120
           P   PAQ    LAP+FRI  PV  + TA+
Sbjct: 254 PGSAPAQRVRVLAPVFRICSPVPWTGTAT 282


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.326    0.139    0.449 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,148,502
Number of Sequences: 37866
Number of extensions: 573887
Number of successful extensions: 1397
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1385
Number of HSP's gapped (non-prelim): 11
length of query: 343
length of database: 18,247,518
effective HSP length: 103
effective length of query: 240
effective length of database: 14,347,320
effective search space: 3443356800
effective search space used: 3443356800
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.