BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|94721347 heparanase [Homo sapiens] (543 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|94721347 heparanase [Homo sapiens] 1098 0.0 gi|148746204 heparanase [Homo sapiens] 1098 0.0 gi|90403586 heparanase 2 [Homo sapiens] 438 e-123 gi|24308458 Lix1 homolog (mouse) like [Homo sapiens] 31 2.5 gi|189095271 phospholipase A2, group VII [Homo sapiens] 29 9.6 gi|163310743 LIM and calponin homology domains 1 isoform b [Homo... 29 9.6 gi|163310741 LIM and calponin homology domains 1 isoform a [Homo... 29 9.6 >gi|94721347 heparanase [Homo sapiens] Length = 543 Score = 1098 bits (2841), Expect = 0.0 Identities = 543/543 (100%), Positives = 543/543 (100%) Query: 1 MLLRSKPALPPPLMLLLLGPLGPLSPGALPRPAQAQDVVDLDFFTQEPLHLVSPSFLSVT 60 MLLRSKPALPPPLMLLLLGPLGPLSPGALPRPAQAQDVVDLDFFTQEPLHLVSPSFLSVT Sbjct: 1 MLLRSKPALPPPLMLLLLGPLGPLSPGALPRPAQAQDVVDLDFFTQEPLHLVSPSFLSVT 60 Query: 61 IDANLATDPRFLILLGSPKLRTLARGLSPAYLRFGGTKTDFLIFDPKKESTFEERSYWQS 120 IDANLATDPRFLILLGSPKLRTLARGLSPAYLRFGGTKTDFLIFDPKKESTFEERSYWQS Sbjct: 61 IDANLATDPRFLILLGSPKLRTLARGLSPAYLRFGGTKTDFLIFDPKKESTFEERSYWQS 120 Query: 121 QVNQDICKYGSIPPDVEEKLRLEWPYQEQLLLREHYQKKFKNSTYSRSSVDVLYTFANCS 180 QVNQDICKYGSIPPDVEEKLRLEWPYQEQLLLREHYQKKFKNSTYSRSSVDVLYTFANCS Sbjct: 121 QVNQDICKYGSIPPDVEEKLRLEWPYQEQLLLREHYQKKFKNSTYSRSSVDVLYTFANCS 180 Query: 181 GLDLIFGLNALLRTADLQWNSSNAQLLLDYCSSKGYNISWELGNEPNSFLKKADIFINGS 240 GLDLIFGLNALLRTADLQWNSSNAQLLLDYCSSKGYNISWELGNEPNSFLKKADIFINGS Sbjct: 181 GLDLIFGLNALLRTADLQWNSSNAQLLLDYCSSKGYNISWELGNEPNSFLKKADIFINGS 240 Query: 241 QLGEDFIQLHKLLRKSTFKNAKLYGPDVGQPRRKTAKMLKSFLKAGGEVIDSVTWHHYYL 300 QLGEDFIQLHKLLRKSTFKNAKLYGPDVGQPRRKTAKMLKSFLKAGGEVIDSVTWHHYYL Sbjct: 241 QLGEDFIQLHKLLRKSTFKNAKLYGPDVGQPRRKTAKMLKSFLKAGGEVIDSVTWHHYYL 300 Query: 301 NGRTATKEDFLNPDVLDIFISSVQKVFQVVESTRPGKKVWLGETSSAYGGGAPLLSDTFA 360 NGRTATKEDFLNPDVLDIFISSVQKVFQVVESTRPGKKVWLGETSSAYGGGAPLLSDTFA Sbjct: 301 NGRTATKEDFLNPDVLDIFISSVQKVFQVVESTRPGKKVWLGETSSAYGGGAPLLSDTFA 360 Query: 361 AGFMWLDKLGLSARMGIEVVMRQVFFGAGNYHLVDENFDPLPDYWLSLLFKKLVGTKVLM 420 AGFMWLDKLGLSARMGIEVVMRQVFFGAGNYHLVDENFDPLPDYWLSLLFKKLVGTKVLM Sbjct: 361 AGFMWLDKLGLSARMGIEVVMRQVFFGAGNYHLVDENFDPLPDYWLSLLFKKLVGTKVLM 420 Query: 421 ASVQGSKRRKLRVYLHCTNTDNPRYKEGDLTLYAINLHNVTKYLRLPYPFSNKQVDKYLL 480 ASVQGSKRRKLRVYLHCTNTDNPRYKEGDLTLYAINLHNVTKYLRLPYPFSNKQVDKYLL Sbjct: 421 ASVQGSKRRKLRVYLHCTNTDNPRYKEGDLTLYAINLHNVTKYLRLPYPFSNKQVDKYLL 480 Query: 481 RPLGPHGLLSKSVQLNGLTLKMVDDQTLPPLMEKPLRPGSSLGLPAFSYSFFVIRNAKVA 540 RPLGPHGLLSKSVQLNGLTLKMVDDQTLPPLMEKPLRPGSSLGLPAFSYSFFVIRNAKVA Sbjct: 481 RPLGPHGLLSKSVQLNGLTLKMVDDQTLPPLMEKPLRPGSSLGLPAFSYSFFVIRNAKVA 540 Query: 541 ACI 543 ACI Sbjct: 541 ACI 543 >gi|148746204 heparanase [Homo sapiens] Length = 543 Score = 1098 bits (2841), Expect = 0.0 Identities = 543/543 (100%), Positives = 543/543 (100%) Query: 1 MLLRSKPALPPPLMLLLLGPLGPLSPGALPRPAQAQDVVDLDFFTQEPLHLVSPSFLSVT 60 MLLRSKPALPPPLMLLLLGPLGPLSPGALPRPAQAQDVVDLDFFTQEPLHLVSPSFLSVT Sbjct: 1 MLLRSKPALPPPLMLLLLGPLGPLSPGALPRPAQAQDVVDLDFFTQEPLHLVSPSFLSVT 60 Query: 61 IDANLATDPRFLILLGSPKLRTLARGLSPAYLRFGGTKTDFLIFDPKKESTFEERSYWQS 120 IDANLATDPRFLILLGSPKLRTLARGLSPAYLRFGGTKTDFLIFDPKKESTFEERSYWQS Sbjct: 61 IDANLATDPRFLILLGSPKLRTLARGLSPAYLRFGGTKTDFLIFDPKKESTFEERSYWQS 120 Query: 121 QVNQDICKYGSIPPDVEEKLRLEWPYQEQLLLREHYQKKFKNSTYSRSSVDVLYTFANCS 180 QVNQDICKYGSIPPDVEEKLRLEWPYQEQLLLREHYQKKFKNSTYSRSSVDVLYTFANCS Sbjct: 121 QVNQDICKYGSIPPDVEEKLRLEWPYQEQLLLREHYQKKFKNSTYSRSSVDVLYTFANCS 180 Query: 181 GLDLIFGLNALLRTADLQWNSSNAQLLLDYCSSKGYNISWELGNEPNSFLKKADIFINGS 240 GLDLIFGLNALLRTADLQWNSSNAQLLLDYCSSKGYNISWELGNEPNSFLKKADIFINGS Sbjct: 181 GLDLIFGLNALLRTADLQWNSSNAQLLLDYCSSKGYNISWELGNEPNSFLKKADIFINGS 240 Query: 241 QLGEDFIQLHKLLRKSTFKNAKLYGPDVGQPRRKTAKMLKSFLKAGGEVIDSVTWHHYYL 300 QLGEDFIQLHKLLRKSTFKNAKLYGPDVGQPRRKTAKMLKSFLKAGGEVIDSVTWHHYYL Sbjct: 241 QLGEDFIQLHKLLRKSTFKNAKLYGPDVGQPRRKTAKMLKSFLKAGGEVIDSVTWHHYYL 300 Query: 301 NGRTATKEDFLNPDVLDIFISSVQKVFQVVESTRPGKKVWLGETSSAYGGGAPLLSDTFA 360 NGRTATKEDFLNPDVLDIFISSVQKVFQVVESTRPGKKVWLGETSSAYGGGAPLLSDTFA Sbjct: 301 NGRTATKEDFLNPDVLDIFISSVQKVFQVVESTRPGKKVWLGETSSAYGGGAPLLSDTFA 360 Query: 361 AGFMWLDKLGLSARMGIEVVMRQVFFGAGNYHLVDENFDPLPDYWLSLLFKKLVGTKVLM 420 AGFMWLDKLGLSARMGIEVVMRQVFFGAGNYHLVDENFDPLPDYWLSLLFKKLVGTKVLM Sbjct: 361 AGFMWLDKLGLSARMGIEVVMRQVFFGAGNYHLVDENFDPLPDYWLSLLFKKLVGTKVLM 420 Query: 421 ASVQGSKRRKLRVYLHCTNTDNPRYKEGDLTLYAINLHNVTKYLRLPYPFSNKQVDKYLL 480 ASVQGSKRRKLRVYLHCTNTDNPRYKEGDLTLYAINLHNVTKYLRLPYPFSNKQVDKYLL Sbjct: 421 ASVQGSKRRKLRVYLHCTNTDNPRYKEGDLTLYAINLHNVTKYLRLPYPFSNKQVDKYLL 480 Query: 481 RPLGPHGLLSKSVQLNGLTLKMVDDQTLPPLMEKPLRPGSSLGLPAFSYSFFVIRNAKVA 540 RPLGPHGLLSKSVQLNGLTLKMVDDQTLPPLMEKPLRPGSSLGLPAFSYSFFVIRNAKVA Sbjct: 481 RPLGPHGLLSKSVQLNGLTLKMVDDQTLPPLMEKPLRPGSSLGLPAFSYSFFVIRNAKVA 540 Query: 541 ACI 543 ACI Sbjct: 541 ACI 543 >gi|90403586 heparanase 2 [Homo sapiens] Length = 592 Score = 438 bits (1126), Expect = e-123 Identities = 244/558 (43%), Positives = 328/558 (58%), Gaps = 29/558 (5%) Query: 13 LMLLLLGPLGPLSPGALPRPAQAQD--VVDLDFFTQEPLHLVSPSFLSVTIDANLATDPR 70 L L L G P + R A ++ ++ LD T+ P+ V+ +FLS+ +D ++ D Sbjct: 33 LHLSLSSQAGDRRPLPVDRAAGLKEKTLILLDVSTKNPVRTVNENFLSLQLDPSIIHDG- 91 Query: 71 FLILLGSPKLRTLARGLSPAYLRFGGTKTDFLIF----DPKKESTFEERSYWQSQVNQDI 126 +L L S +L TLARGLSPA+LRFGG +TDFL F +P K Y+ DI Sbjct: 92 WLDFLSSKRLVTLARGLSPAFLRFGGKRTDFLQFQNLRNPAKSRGGPGPDYYLKNYEDDI 151 Query: 127 ------------CKYGSIPPDVEEKLRLEWPYQEQLLLREHYQKKFKNSTYSRSSVDVLY 174 CK P + E R + +LL+E + + N + S+D LY Sbjct: 152 VRSDVALDKQKGCKIAQHPDVMLELQREKAAQMHLVLLKEQFSNTYSNLILTARSLDKLY 211 Query: 175 TFANCSGLDLIFGLNALLRTADLQWNSSNAQLLLDYCSSKGYNISWELGNEPNSFLKKAD 234 FA+CSGL LIF LNAL R + WNSS+A LL Y +SK YNISWELGNEPN++ Sbjct: 212 NFADCSGLHLIFALNALRRNPNNSWNSSSALSLLKYSASKKYNISWELGNEPNNYRTMHG 271 Query: 235 IFINGSQLGEDFIQLHKLLRK-STFKNAKLYGPDVGQPRRKTAKMLKSFLKAGGEVIDSV 293 +NGSQLG+D+IQL LL+ + A LYGP++G+PR+ +L F+K G +D+V Sbjct: 272 RAVNGSQLGKDYIQLKSLLQPIRIYSRASLYGPNIGRPRKNVIALLDGFMKVAGSTVDAV 331 Query: 294 TWHHYYLNGRTATKEDFLNPDVLDIFISSVQKVFQVVESTRPGKKVWLGETSSAYGGGAP 353 TW H Y++GR DFL +LD ++K+ +VV + PGKK+WL + GG Sbjct: 332 TWQHCYIDGRVVKVMDFLKTRLLDTLSDQIRKIQKVVNTYTPGKKIWLEGVVTTSAGGTN 391 Query: 354 LLSDTFAAGFMWLDKLGLSARMGIEVVMRQVFFGAGNYHLVDENFDPLPDYWLSLLFKKL 413 LSD++AAGF+WL+ LG+ A GI+VV+R FF G HLVD+NF+PLPDYWLSLL+K+L Sbjct: 392 NLSDSYAAGFLWLNTLGMLANQGIDVVIRHSFFDHGYNHLVDQNFNPLPDYWLSLLYKRL 451 Query: 414 VGTKVLMASVQGSKRR---------KLRVYLHCTNTDNPRYKEGDLTLYAINLHNVTKYL 464 +G KVL V G +R+ KLR+Y HCTN N Y G +TL+ INLH K + Sbjct: 452 IGPKVLAVHVAGLQRKPRPGRVIRDKLRIYAHCTNHHNHNYVRGSITLFIINLHRSRKKI 511 Query: 465 RLPYPFSNKQVDKYLLRPLGPHGLLSKSVQLNGLTLKMVDDQTLPPLMEKPLRPGSSLGL 524 +L +K V +YLL+P G GL SKSVQLNG L MVDD TLP L +PLR G +L + Sbjct: 512 KLAGTLRDKLVHQYLLQPYGQEGLKSKSVQLNGQPLVMVDDGTLPELKPRPLRAGRTLVI 571 Query: 525 PAFSYSFFVIRNAKVAAC 542 P + FFV++N AC Sbjct: 572 PPVTMGFFVVKNVNALAC 589 >gi|24308458 Lix1 homolog (mouse) like [Homo sapiens] Length = 337 Score = 31.2 bits (69), Expect = 2.5 Identities = 16/34 (47%), Positives = 20/34 (58%) Query: 7 PALPPPLMLLLLGPLGPLSPGALPRPAQAQDVVD 40 PA PPP +LL P PL PGA PA ++ V+ Sbjct: 49 PAPPPPPLLLSGAPGLPLPPGAAGSPAVLREAVE 82 >gi|189095271 phospholipase A2, group VII [Homo sapiens] Length = 441 Score = 29.3 bits (64), Expect = 9.6 Identities = 25/88 (28%), Positives = 33/88 (37%), Gaps = 17/88 (19%) Query: 459 NVTKYLRLPYP-----------FSNKQVDKYLLRPLGPHGLLSKSVQLNGLTLKMVDDQT 507 N +LRL YP NK+ L + LG H L+ ++L + T Sbjct: 76 NKGTFLRLYYPSQDNDRLDTLWIPNKEYFWGLSKFLGTHWLMGNILRL------LFGSMT 129 Query: 508 LPPLMEKPLRPGSSLGLPAFSYSFFVIR 535 P PLRPG L FS+ R Sbjct: 130 TPANWNSPLRPGEKYPLVVFSHGLGAFR 157 >gi|163310743 LIM and calponin homology domains 1 isoform b [Homo sapiens] Length = 1057 Score = 29.3 bits (64), Expect = 9.6 Identities = 15/54 (27%), Positives = 28/54 (51%) Query: 106 PKKESTFEERSYWQSQVNQDICKYGSIPPDVEEKLRLEWPYQEQLLLREHYQKK 159 P S + S +S V K+ + P+ E + + +W +++ LL+E YQK+ Sbjct: 742 PNLNSQVDSPSSEKSPVMTPQFKFWAWDPEEERRRQEKWQQEQERLLQERYQKE 795 >gi|163310741 LIM and calponin homology domains 1 isoform a [Homo sapiens] Length = 1083 Score = 29.3 bits (64), Expect = 9.6 Identities = 15/54 (27%), Positives = 28/54 (51%) Query: 106 PKKESTFEERSYWQSQVNQDICKYGSIPPDVEEKLRLEWPYQEQLLLREHYQKK 159 P S + S +S V K+ + P+ E + + +W +++ LL+E YQK+ Sbjct: 742 PNLNSQVDSPSSEKSPVMTPQFKFWAWDPEEERRRQEKWQQEQERLLQERYQKE 795 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.320 0.138 0.419 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 21,955,863 Number of Sequences: 37866 Number of extensions: 1035329 Number of successful extensions: 2679 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 2670 Number of HSP's gapped (non-prelim): 7 length of query: 543 length of database: 18,247,518 effective HSP length: 107 effective length of query: 436 effective length of database: 14,195,856 effective search space: 6189393216 effective search space used: 6189393216 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.