Guide to the Human Genome
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Name: YJEFN3 Sequence: fasta or formatted (299aa) NCBI GI: 94400927
Description:

YjeF N-terminal domain containing 3

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.7         32           3
 C cysteine            2.7          8           1
 D aspartate           5.0         15           2
 E glutamate           7.0         21           2
 F phenylalanine       3.3         10           1
 G glycine             7.7         23           2
 H histidine           2.0          6           2
 I isoleucine          2.0          6           1
 K lysine              2.3          7           1
 L leucine            12.7         38           2
 M methionine          1.0          3           1
 N asparagine          1.3          4           1
 P proline             7.4         22           2
 Q glutamine           4.0         12           2
 R arginine            8.0         24           2
 S serine              6.4         19           2
 T threonine           5.0         15           2
 V valine              8.0         24           2
 W tryptophan          1.3          4           1
 Y tyrosine            2.0          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   YjeF N-terminal domain containing 3 
APOA1BP               0.352   apolipoprotein A-I binding protein precursor 
EDC3                  0.021   enhancer of mRNA decapping 3 
EDC3                  0.021   enhancer of mRNA decapping 3 
EDC3                  0.021   enhancer of mRNA decapping 3 
LOC441869             0.012   hypothetical protein LOC441869 
PDE3A                 0.009   phosphodiesterase 3A 
KIAA1524              0.007   p90 autoantigen 
PCNXL2                0.007   pecanex-like 2 
PLCB4                 0.005   phospholipase C beta 4 isoform a 
PLCB4                 0.005   phospholipase C beta 4 isoform b 
ZXDC                  0.005   ZXD family zinc finger C isoform 2 
ZXDC                  0.005   ZXD family zinc finger C isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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