Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 91823271

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|91823271 xanthine dehydrogenase [Homo sapiens]
         (1333 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|91823271 xanthine dehydrogenase [Homo sapiens]                    2703   0.0  
gi|71773480 aldehyde oxidase 1 [Homo sapiens]                        1332   0.0  
gi|4885563 protein kinase C, epsilon [Homo sapiens]                    36   0.22 
gi|209870065 methyltransferase like 11B [Homo sapiens]                 32   3.1  
gi|239741769 PREDICTED: similar to protein expressed in prostate...    32   5.3  
gi|88953571 PREDICTED: similar to protein expressed in prostate,...    32   5.3  

>gi|91823271 xanthine dehydrogenase [Homo sapiens]
          Length = 1333

 Score = 2703 bits (7006), Expect = 0.0
 Identities = 1333/1333 (100%), Positives = 1333/1333 (100%)

Query: 1    MTADKLVFFVNGRKVVEKNADPETTLLAYLRRKLGLSGTKLGCGEGGCGACTVMLSKYDR 60
            MTADKLVFFVNGRKVVEKNADPETTLLAYLRRKLGLSGTKLGCGEGGCGACTVMLSKYDR
Sbjct: 1    MTADKLVFFVNGRKVVEKNADPETTLLAYLRRKLGLSGTKLGCGEGGCGACTVMLSKYDR 60

Query: 61   LQNKIVHFSANACLAPICSLHHVAVTTVEGIGSTKTRLHPVQERIAKSHGSQCGFCTPGI 120
            LQNKIVHFSANACLAPICSLHHVAVTTVEGIGSTKTRLHPVQERIAKSHGSQCGFCTPGI
Sbjct: 61   LQNKIVHFSANACLAPICSLHHVAVTTVEGIGSTKTRLHPVQERIAKSHGSQCGFCTPGI 120

Query: 121  VMSMYTLLRNQPEPTMEEIENAFQGNLCRCTGYRPILQGFRTFARDGGCCGGDGNNPNCC 180
            VMSMYTLLRNQPEPTMEEIENAFQGNLCRCTGYRPILQGFRTFARDGGCCGGDGNNPNCC
Sbjct: 121  VMSMYTLLRNQPEPTMEEIENAFQGNLCRCTGYRPILQGFRTFARDGGCCGGDGNNPNCC 180

Query: 181  MNQKKDHSVSLSPSLFKPEEFTPLDPTQEPIFPPELLRLKDTPRKQLRFEGERVTWIQAS 240
            MNQKKDHSVSLSPSLFKPEEFTPLDPTQEPIFPPELLRLKDTPRKQLRFEGERVTWIQAS
Sbjct: 181  MNQKKDHSVSLSPSLFKPEEFTPLDPTQEPIFPPELLRLKDTPRKQLRFEGERVTWIQAS 240

Query: 241  TLKELLDLKAQHPDAKLVVGNTEIGIEMKFKNMLFPMIVCPAWIPELNSVEHGPDGISFG 300
            TLKELLDLKAQHPDAKLVVGNTEIGIEMKFKNMLFPMIVCPAWIPELNSVEHGPDGISFG
Sbjct: 241  TLKELLDLKAQHPDAKLVVGNTEIGIEMKFKNMLFPMIVCPAWIPELNSVEHGPDGISFG 300

Query: 301  AACPLSIVEKTLVDAVAKLPAQKTEVFRGVLEQLRWFAGKQVKSVASVGGNIITASPISD 360
            AACPLSIVEKTLVDAVAKLPAQKTEVFRGVLEQLRWFAGKQVKSVASVGGNIITASPISD
Sbjct: 301  AACPLSIVEKTLVDAVAKLPAQKTEVFRGVLEQLRWFAGKQVKSVASVGGNIITASPISD 360

Query: 361  LNPVFMASGAKLTLVSRGTRRTVQMDHTFFPGYRKTLLSPEEILLSIEIPYSREGEYFSA 420
            LNPVFMASGAKLTLVSRGTRRTVQMDHTFFPGYRKTLLSPEEILLSIEIPYSREGEYFSA
Sbjct: 361  LNPVFMASGAKLTLVSRGTRRTVQMDHTFFPGYRKTLLSPEEILLSIEIPYSREGEYFSA 420

Query: 421  FKQASRREDDIAKVTSGMRVLFKPGTTEVQELALCYGGMANRTISALKTTQRQLSKLWKE 480
            FKQASRREDDIAKVTSGMRVLFKPGTTEVQELALCYGGMANRTISALKTTQRQLSKLWKE
Sbjct: 421  FKQASRREDDIAKVTSGMRVLFKPGTTEVQELALCYGGMANRTISALKTTQRQLSKLWKE 480

Query: 481  ELLQDVCAGLAEELHLPPDAPGGMVDFRCTLTLSFFFKFYLTVLQKLGQENLEDKCGKLD 540
            ELLQDVCAGLAEELHLPPDAPGGMVDFRCTLTLSFFFKFYLTVLQKLGQENLEDKCGKLD
Sbjct: 481  ELLQDVCAGLAEELHLPPDAPGGMVDFRCTLTLSFFFKFYLTVLQKLGQENLEDKCGKLD 540

Query: 541  PTFASATLLFQKDPPADVQLFQEVPKGQSEEDMVGRPLPHLAADMQASGEAVYCDDIPRY 600
            PTFASATLLFQKDPPADVQLFQEVPKGQSEEDMVGRPLPHLAADMQASGEAVYCDDIPRY
Sbjct: 541  PTFASATLLFQKDPPADVQLFQEVPKGQSEEDMVGRPLPHLAADMQASGEAVYCDDIPRY 600

Query: 601  ENELSLRLVTSTRAHAKIKSIDTSEAKKVPGFVCFISADDVPGSNITGICNDETVFAKDK 660
            ENELSLRLVTSTRAHAKIKSIDTSEAKKVPGFVCFISADDVPGSNITGICNDETVFAKDK
Sbjct: 601  ENELSLRLVTSTRAHAKIKSIDTSEAKKVPGFVCFISADDVPGSNITGICNDETVFAKDK 660

Query: 661  VTCVGHIIGAVVADTPEHTQRAAQGVKITYEELPAIITIEDAIKNNSFYGPELKIEKGDL 720
            VTCVGHIIGAVVADTPEHTQRAAQGVKITYEELPAIITIEDAIKNNSFYGPELKIEKGDL
Sbjct: 661  VTCVGHIIGAVVADTPEHTQRAAQGVKITYEELPAIITIEDAIKNNSFYGPELKIEKGDL 720

Query: 721  KKGFSEADNVVSGEIYIGGQEHFYLETHCTIAVPKGEAGEMELFVSTQNTMKTQSFVAKM 780
            KKGFSEADNVVSGEIYIGGQEHFYLETHCTIAVPKGEAGEMELFVSTQNTMKTQSFVAKM
Sbjct: 721  KKGFSEADNVVSGEIYIGGQEHFYLETHCTIAVPKGEAGEMELFVSTQNTMKTQSFVAKM 780

Query: 781  LGVPANRIVVRVKRMGGGFGGKETRSTVVSTAVALAAYKTGRPVRCMLDRDEDMLITGGR 840
            LGVPANRIVVRVKRMGGGFGGKETRSTVVSTAVALAAYKTGRPVRCMLDRDEDMLITGGR
Sbjct: 781  LGVPANRIVVRVKRMGGGFGGKETRSTVVSTAVALAAYKTGRPVRCMLDRDEDMLITGGR 840

Query: 841  HPFLARYKVGFMKTGTVVALEVDHFSNVGNTQDLSQSIMERALFHMDNCYKIPNIRGTGR 900
            HPFLARYKVGFMKTGTVVALEVDHFSNVGNTQDLSQSIMERALFHMDNCYKIPNIRGTGR
Sbjct: 841  HPFLARYKVGFMKTGTVVALEVDHFSNVGNTQDLSQSIMERALFHMDNCYKIPNIRGTGR 900

Query: 901  LCKTNLPSNTAFRGFGGPQGMLIAECWMSEVAVTCGMPAEEVRRKNLYKEGDLTHFNQKL 960
            LCKTNLPSNTAFRGFGGPQGMLIAECWMSEVAVTCGMPAEEVRRKNLYKEGDLTHFNQKL
Sbjct: 901  LCKTNLPSNTAFRGFGGPQGMLIAECWMSEVAVTCGMPAEEVRRKNLYKEGDLTHFNQKL 960

Query: 961  EGFTLPRCWEECLASSQYHARKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGA 1020
            EGFTLPRCWEECLASSQYHARKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGA
Sbjct: 961  EGFTLPRCWEECLASSQYHARKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGA 1020

Query: 1021 LLHVYTDGSVLLTHGGTEMGQGLHTKMVQVASRALKIPTSKIYISETSTNTVPNTSPTAA 1080
            LLHVYTDGSVLLTHGGTEMGQGLHTKMVQVASRALKIPTSKIYISETSTNTVPNTSPTAA
Sbjct: 1021 LLHVYTDGSVLLTHGGTEMGQGLHTKMVQVASRALKIPTSKIYISETSTNTVPNTSPTAA 1080

Query: 1081 SVSADLNGQAVYAACQTILKRLEPYKKKNPSGSWEDWVTAAYMDTVSLSATGFYRTPNLG 1140
            SVSADLNGQAVYAACQTILKRLEPYKKKNPSGSWEDWVTAAYMDTVSLSATGFYRTPNLG
Sbjct: 1081 SVSADLNGQAVYAACQTILKRLEPYKKKNPSGSWEDWVTAAYMDTVSLSATGFYRTPNLG 1140

Query: 1141 YSFETNSGNPFHYFSYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAF 1200
            YSFETNSGNPFHYFSYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAF
Sbjct: 1141 YSFETNSGNPFHYFSYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAF 1200

Query: 1201 VQGLGLFTLEELHYSPEGSLHTRGPSTYKIPAFGSIPIEFRVSLLRDCPNKKAIYASKAV 1260
            VQGLGLFTLEELHYSPEGSLHTRGPSTYKIPAFGSIPIEFRVSLLRDCPNKKAIYASKAV
Sbjct: 1201 VQGLGLFTLEELHYSPEGSLHTRGPSTYKIPAFGSIPIEFRVSLLRDCPNKKAIYASKAV 1260

Query: 1261 GEPPLFLAASIFFAIKDAIRAARAQHTGNNVKELFRLDSPATPEKIRNACVDKFTTLCVT 1320
            GEPPLFLAASIFFAIKDAIRAARAQHTGNNVKELFRLDSPATPEKIRNACVDKFTTLCVT
Sbjct: 1261 GEPPLFLAASIFFAIKDAIRAARAQHTGNNVKELFRLDSPATPEKIRNACVDKFTTLCVT 1320

Query: 1321 GVPENCKPWSVRV 1333
            GVPENCKPWSVRV
Sbjct: 1321 GVPENCKPWSVRV 1333


>gi|71773480 aldehyde oxidase 1 [Homo sapiens]
          Length = 1338

 Score = 1332 bits (3447), Expect = 0.0
 Identities = 669/1342 (49%), Positives = 905/1342 (67%), Gaps = 18/1342 (1%)

Query: 3    ADKLVFFVNGRKVVEKNADPETTLLAYLRRKLGLSGTKLGCGEGGCGACTVMLSKYDRLQ 62
            A +L+F+VNGRKV+EKN DPET LL YLR+KL L+GTK GCG GGCGACTVM+S+Y+ + 
Sbjct: 4    ASELLFYVNGRKVIEKNVDPETMLLPYLRKKLRLTGTKYGCGGGGCGACTVMISRYNPIT 63

Query: 63   NKIVHFSANACLAPICSLHHVAVTTVEGIGSTKTRLHPVQERIAKSHGSQCGFCTPGIVM 122
             +I H  ANACL PICSL+  AVTTVEGIGST TR+HPVQERIAK HG+QCGFCTPG+VM
Sbjct: 64   KRIRHHPANACLIPICSLYGAAVTTVEGIGSTHTRIHPVQERIAKCHGTQCGFCTPGMVM 123

Query: 123  SMYTLLRNQPEPTMEEIENAFQGNLCRCTGYRPILQGFRTFARDGGCCGGDGNNPNCCMN 182
            S+YTLLRN PEPT++++ +A  GNLCRCTGYRPI+   +TF +  GCC    N   CC++
Sbjct: 124  SIYTLLRNHPEPTLDQLTDALGGNLCRCTGYRPIIDACKTFCKTSGCCQSKENGV-CCLD 182

Query: 183  Q------KKDHSVSLSPSLFKPEEFTPLDPTQEPIFPPELLRLKDTPRKQLR-FEGERVT 235
            Q      + +     SP LF  EEF PLDPTQE IFPPEL+ + +   ++ R F  ER+ 
Sbjct: 183  QGINGLPEFEEGSKTSPKLFAEEEFLPLDPTQELIFPPELMIMAEKQSQRTRVFGSERMM 242

Query: 236  WIQASTLKELLDLKAQHPDAKLVVGNTEIGIEMKFKNMLFPMIVCPAWIPELNSVEHGPD 295
            W    TLKELL+ K ++P A +++GNT +G E+KFK +  P+I+ P  I EL+ V H  +
Sbjct: 243  WFSPVTLKELLEFKFKYPQAPVIMGNTSVGPEVKFKGVFHPVIISPDRIEELSVVNHAYN 302

Query: 296  GISFGAACPLSIVEKTLVDAVAKLPAQKTEVFRGVLEQLRWFAGKQVKSVASVGGNIITA 355
            G++ GA   L+ V+  L D V KLP +KT+++  +L+ L   AG Q++++AS+GG+II+ 
Sbjct: 303  GLTLGAGLSLAQVKDILADVVQKLPEEKTQMYHALLKHLGTLAGSQIRNMASLGGHIISR 362

Query: 356  SPISDLNPVFMASGAKLTLVSRGTRRTVQMDHTFFPGYRKTLLSPEEILLSIEIPYSREG 415
             P SDLNP+       L L+S+  +R + ++  F        L P+EIL+S+ IPYSR+ 
Sbjct: 363  HPDSDLNPILAVGNCTLNLLSKEGKRQIPLNEQFLSKCPNADLKPQEILVSVNIPYSRKW 422

Query: 416  EYFSAFKQASRREDDIAKVTSGMRVLFKPGTTEVQELALCYGGMANRTISALKTTQRQLS 475
            E+ SAF+QA R+E+ +A V SGMRV F  G   ++EL + YGG+   TI A  + Q+ + 
Sbjct: 423  EFVSAFRQAQRQENALAIVNSGMRVFFGEGDGIIRELCISYGGVGPATICAKNSCQKLIG 482

Query: 476  KLWKEELLQDVCAGLAEELHLPPDAPGGMVDFRCTLTLSFFFKFYLTVLQKLGQENLEDK 535
            + W E++L   C  +  E+ L   APGG V+F+ TL +SF FKFYL V Q L + +    
Sbjct: 483  RHWNEQMLDIACRLILNEVSLLGSAPGGKVEFKRTLIISFLFKFYLEVSQILKKMDPVHY 542

Query: 536  CGKLDPTFASATLLFQKDPPADVQLFQEVPKGQSEEDMVGRPLPHLAADMQASGEAVYCD 595
                D   ++   L  K   + ++ +Q +   Q  ED +G P+ HL+    A+GEA+YCD
Sbjct: 543  PSLADKYESALEDLHSKHHCSTLK-YQNIGPKQHPEDPIGHPIMHLSGVKHATGEAIYCD 601

Query: 596  DIPRYENELSLRLVTSTRAHAKIKSIDTSEAKKVPGFVCFISADDVPGSNITGIC---ND 652
            D+P  + EL L  VTS+RAHAKI SID SEA  +PG V  ++A+ +  S++   C     
Sbjct: 602  DMPLVDQELFLTFVTSSRAHAKIVSIDLSEALSMPGVVDIMTAEHL--SDVNSFCFFTEA 659

Query: 653  ETVFAKDKVTCVGHIIGAVVADTPEHTQRAAQGVKITYEEL-PAIITIEDAIKNNSFYGP 711
            E   A DKV CVG ++ AV+AD+    +RAA+ VKI Y++L P I+TIE++I++NS + P
Sbjct: 660  EKFLATDKVFCVGQLVCAVLADSEVQAKRAAKRVKIVYQDLEPLILTIEESIQHNSSFKP 719

Query: 712  ELKIEKGDLKKGFSEADNVVSGEIYIGGQEHFYLETHCTIAVPKGEAGEMELFVSTQNTM 771
            E K+E G++ + F   D ++ GEI++GGQEHFY+ET   + VPKGE  EM+++VSTQ   
Sbjct: 720  ERKLEYGNVDEAFKVVDQILEGEIHMGGQEHFYMETQSMLVVPKGEDQEMDVYVSTQFPK 779

Query: 772  KTQSFVAKMLGVPANRIVVRVKRMGGGFGGKETRSTVVSTAVALAAYKTGRPVRCMLDRD 831
              Q  VA  L +PAN+++  V+R+GG FGGK  ++ +++   A AA K GR VRC+L+R 
Sbjct: 780  YIQDIVASTLKLPANKVMCHVRRVGGAFGGKVLKTGIIAAVTAFAANKHGRAVRCVLERG 839

Query: 832  EDMLITGGRHPFLARYKVGFMKTGTVVALEVDHFSNVGNTQDLSQSIMERALFHMDNCYK 891
            EDMLITGGRHP+L +YK GFM  G ++AL+++H+SN G + D S  ++E  L  MDN YK
Sbjct: 840  EDMLITGGRHPYLGKYKAGFMNDGRILALDMEHYSNAGASLDESLFVIEMGLLKMDNAYK 899

Query: 892  IPNIRGTGRLCKTNLPSNTAFRGFGGPQGMLIAECWMSEVAVTCGMPAEEVRRKNLYKEG 951
             PN+R  G  C+TNLPSNTAFRGFG PQ  LI E  ++EVA  CG+  E+VR  N+YKE 
Sbjct: 900  FPNLRCRGWACRTNLPSNTAFRGFGFPQAALITESCITEVAAKCGLSPEKVRIINMYKEI 959

Query: 952  DLTHFNQKLEGFTLPRCWEECLASSQYHARKSEVDKFNKENCWKKRGLCIIPTKFGISFT 1011
            D T + Q++    L +CW EC+A S Y  RK  V+KFN EN WKK+GL ++P KF +   
Sbjct: 960  DQTPYKQEINAKNLIQCWRECMAMSSYSLRKVAVEKFNAENYWKKKGLAMVPLKFPVGLG 1019

Query: 1012 VPFLNQAGALLHVYTDGSVLLTHGGTEMGQGLHTKMVQVASRALKIPTSKIYISETSTNT 1071
                 QA AL+H+Y DGSVL+THGG EMGQG+HTKM+QV SR L++P S +++  TST T
Sbjct: 1020 SRAAGQAAALVHIYLDGSVLVTHGGIEMGQGVHTKMIQVVSRELRMPMSNVHLRGTSTET 1079

Query: 1072 VPNTSPTAASVSADLNGQAVYAACQTILKRLEPYKKKNPSGSWEDWVTAAYMDTVSLSAT 1131
            VPN + +  SV ADLNG AV  ACQT+LKRLEP   KNP G+W+DW   A+ ++++LSA 
Sbjct: 1080 VPNANISGGSVVADLNGLAVKDACQTLLKRLEPIISKNPKGTWKDWAQTAFDESINLSAV 1139

Query: 1132 GFYRTPNLGYSFETNSGNPFHYFSYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAI 1191
            G++R      ++E   G PF YF YG ACSEVEIDCLTGDHKN+RTDIVMDVG S+NPAI
Sbjct: 1140 GYFRGYESDMNWEKGEGQPFEYFVYGAACSEVEIDCLTGDHKNIRTDIVMDVGCSINPAI 1199

Query: 1192 DIGQVEGAFVQGLGLFTLEELHYSPEGSLHTRGPSTYKIPAFGSIPIEFRVSLLRDCPNK 1251
            DIGQ+EGAF+QG+GL+T+EEL+YSP+G LHTRGP  YKIPA   +P E  ++LL    N 
Sbjct: 1200 DIGQIEGAFIQGMGLYTIEELNYSPQGILHTRGPDQYKIPAICDMPTELHIALLPPSQNS 1259

Query: 1252 KAIYASKAVGEPPLFLAASIFFAIKDAIRAARAQHTGNNVKELFRLDSPATPEKIRNACV 1311
              +Y+SK +GE  +FL  S+FFAI DA+ AAR +     +     L+SP TPEKIR AC 
Sbjct: 1260 NTLYSSKGLGESGVFLGCSVFFAIHDAVSAARQE---RGLHGPLTLNSPLTPEKIRMACE 1316

Query: 1312 DKFTTLCVTGVPENCKPWSVRV 1333
            DKFT +     P +  PW+V +
Sbjct: 1317 DKFTKMIPRDEPGSYVPWNVPI 1338


>gi|4885563 protein kinase C, epsilon [Homo sapiens]
          Length = 737

 Score = 36.2 bits (82), Expect = 0.22
 Identities = 20/52 (38%), Positives = 25/52 (48%)

Query: 464 ISALKTTQRQLSKLWKEELLQDVCAGLAEELHLPPDAPGGMVDFRCTLTLSF 515
           I    T Q+  S  W +E + DVC G   EL +  DAP G  DF    T+ F
Sbjct: 51  IGQTATKQKTNSPAWHDEFVTDVCNGRKIELAVFHDAPIGYDDFVANCTIQF 102


>gi|209870065 methyltransferase like 11B [Homo sapiens]
          Length = 283

 Score = 32.3 bits (72), Expect = 3.1
 Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 9/105 (8%)

Query: 699 IEDAIKNNSFYGPELKIEKGDLKKGFSEADNVVSGEI-YIGGQEHFYLETHCTIAVPKGE 757
           +  AI+N+ F      +EK  L K ++    V++GE+ +    + FY E      VP  E
Sbjct: 30  LHKAIRNDFFQSYLYLLEKIPLVKLYALTSQVINGEMQFYARAKLFYQE------VPATE 83

Query: 758 AGEMELFV--STQNTMKTQSFVAKMLGVPANRIVVRVKRMGGGFG 800
            G M  F+  S+ +   +Q F+ K +G P           G G G
Sbjct: 84  EGMMGNFIELSSPDIQASQKFLRKFVGGPGRAGTDCALDCGSGIG 128


>gi|239741769 PREDICTED: similar to protein expressed in prostate,
           ovary, testis, and placenta 2 [Homo sapiens]
          Length = 952

 Score = 31.6 bits (70), Expect = 5.3
 Identities = 37/159 (23%), Positives = 53/159 (33%), Gaps = 24/159 (15%)

Query: 840 RHPFLARYKVGFMKTGTVVALEVDHFSNVGNTQDLSQSIMERALFHMDN--CYKIPNIRG 897
           + PF+ R K+G               SNVG + D   S M+     M    C+  P  RG
Sbjct: 15  KKPFVLRSKMGKWCRHCFPCCRGSGKSNVGTSGDQDDSTMKTLRSKMGKWCCHCFPCCRG 74

Query: 898 TGRLCKTNLPSNTAFRGFGGPQGMLIAECWMSEVAVTCGMPAEEVRRKNLYKEGDLTHFN 957
           +G+       SN    G      M      M +    C        + N+   GD     
Sbjct: 75  SGK-------SNVGTSGDHDDSAMKTLRSKMGKWCCHCFPCCRGSGKSNVGAWGDYDD-- 125

Query: 958 QKLEGFTLPRCWEECLASSQYHARKSEVDKFNKENCWKK 996
                F  PR          YH R+ ++DK ++   W K
Sbjct: 126 ---SAFVEPR----------YHVRREDLDKLHRAAWWGK 151


>gi|88953571 PREDICTED: similar to protein expressed in prostate,
           ovary, testis, and placenta 2 isoform 2 [Homo sapiens]
          Length = 1075

 Score = 31.6 bits (70), Expect = 5.3
 Identities = 37/159 (23%), Positives = 53/159 (33%), Gaps = 24/159 (15%)

Query: 840 RHPFLARYKVGFMKTGTVVALEVDHFSNVGNTQDLSQSIMERALFHMDN--CYKIPNIRG 897
           + PF+ R K+G               SNVG + D   S M+     M    C+  P  RG
Sbjct: 15  KKPFVLRSKMGKWCRHCFPCCRGSGKSNVGTSGDQDDSTMKTLRSKMGKWCCHCFPCCRG 74

Query: 898 TGRLCKTNLPSNTAFRGFGGPQGMLIAECWMSEVAVTCGMPAEEVRRKNLYKEGDLTHFN 957
           +G+       SN    G      M      M +    C        + N+   GD     
Sbjct: 75  SGK-------SNVGTSGDHDDSAMKTLRSKMGKWCCHCFPCCRGSGKSNVGAWGDYDD-- 125

Query: 958 QKLEGFTLPRCWEECLASSQYHARKSEVDKFNKENCWKK 996
                F  PR          YH R+ ++DK ++   W K
Sbjct: 126 ---SAFVEPR----------YHVRREDLDKLHRAAWWGK 151


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.135    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,608,081
Number of Sequences: 37866
Number of extensions: 2453004
Number of successful extensions: 5256
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 5247
Number of HSP's gapped (non-prelim): 6
length of query: 1333
length of database: 18,247,518
effective HSP length: 114
effective length of query: 1219
effective length of database: 13,930,794
effective search space: 16981637886
effective search space used: 16981637886
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press