Guide to the Human Genome
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Name: FAM160B2 Sequence: fasta or formatted (743aa) NCBI GI: 89337270
Description:

retinoic acid induced 16

Referenced in:

Additional Genes in Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.6         64           3
 C cysteine            2.2         16           2
 D aspartate           4.8         36           1
 E glutamate           7.7         57           2
 F phenylalanine       3.9         29           2
 G glycine             5.7         42           2
 H histidine           3.6         27           1
 I isoleucine          3.6         27           2
 K lysine              3.9         29           2
 L leucine            14.0        104           4
 M methionine          1.2          9           1
 N asparagine          1.2          9           1
 P proline             7.3         54           2
 Q glutamine           5.7         42           3
 R arginine            4.3         32           1
 S serine              6.9         51           2
 T threonine           5.8         43           2
 V valine              5.9         44           3
 W tryptophan          0.9          7           1
 Y tyrosine            2.8         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   retinoic acid induced 16 
FAM160B1              0.464   hypothetical protein LOC57700 isoform a 
FAM160B1              0.435   hypothetical protein LOC57700 isoform b 
FAM160A2              0.037   hypothetical protein LOC84067 isoform 2 
FAM160A2              0.037   hypothetical protein LOC84067 isoform 1 
FAM160A1              0.032   hypothetical protein LOC729830 
LOC100293817          0.007   PREDICTED: similar to hCG1811893 
KIAA1486              0.006   hypothetical protein LOC57624 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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