Guide to the Human Genome
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Search of human proteins with 8923657

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|8923657 solute carrier family 35, member A5 [Homo sapiens]
         (424 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|8923657 solute carrier family 35, member A5 [Homo sapiens]         851   0.0  
gi|6912668 solute carrier family 35 member 3A [Homo sapiens]          107   2e-23
gi|109948265 solute carrier family 35, member A2 isoform c [Homo...   104   2e-22
gi|5032211 solute carrier family 35, member A2 isoform a [Homo s...   104   2e-22
gi|5453621 solute carrier family 35 (CMP-sialic acid transporter...   100   3e-21
gi|18087849 solute carrier family 35, member A4 [Homo sapiens]         74   2e-13
gi|14028875 solute carrier family 35 (UDP-glucuronic acid/UDP-N-...    33   0.64 
gi|42741659 ATP-binding cassette, subfamily B, member 1 [Homo sa...    32   1.1  
gi|24497587 adenylate cyclase 4 [Homo sapiens]                         32   1.4  
gi|226342941 zinc finger, DHHC-type containing 15 isoform 2 [Hom...    31   2.4  
gi|21450653 zinc finger, DHHC-type containing 15 isoform 1 [Homo...    31   2.4  
gi|52317200 olfactory receptor, family 2, subfamily M, member 3 ...    31   2.4  
gi|52317204 olfactory receptor, family 2, subfamily M, member 2 ...    30   3.2  
gi|52317209 olfactory receptor, family 2, subfamily M, member 7 ...    30   4.1  
gi|52317206 olfactory receptor, family 2, subfamily M, member 5 ...    29   9.2  

>gi|8923657 solute carrier family 35, member A5 [Homo sapiens]
          Length = 424

 Score =  851 bits (2198), Expect = 0.0
 Identities = 424/424 (100%), Positives = 424/424 (100%)

Query: 1   MEKQCCSHPVICSLSTMYTFLLGAIFIALSSSRILLVKYSANEENKYDYLPTTVNVCSEL 60
           MEKQCCSHPVICSLSTMYTFLLGAIFIALSSSRILLVKYSANEENKYDYLPTTVNVCSEL
Sbjct: 1   MEKQCCSHPVICSLSTMYTFLLGAIFIALSSSRILLVKYSANEENKYDYLPTTVNVCSEL 60

Query: 61  VKLVFCVLVSFCVIKKDHQSRNLKYASWKEFSDFMKWSIPAFLYFLDNLIVFYVLSYLQP 120
           VKLVFCVLVSFCVIKKDHQSRNLKYASWKEFSDFMKWSIPAFLYFLDNLIVFYVLSYLQP
Sbjct: 61  VKLVFCVLVSFCVIKKDHQSRNLKYASWKEFSDFMKWSIPAFLYFLDNLIVFYVLSYLQP 120

Query: 121 AMAVIFSNFSIITTALLFRIVLKRRLNWIQWASLLTLFLSIVALTAGTKTLQHNLAGRGF 180
           AMAVIFSNFSIITTALLFRIVLKRRLNWIQWASLLTLFLSIVALTAGTKTLQHNLAGRGF
Sbjct: 121 AMAVIFSNFSIITTALLFRIVLKRRLNWIQWASLLTLFLSIVALTAGTKTLQHNLAGRGF 180

Query: 181 HHDAFFSPSNSCLLFRSECPRKDNCTAKEWTFPEAKWNTTARVFSHIRLGMGHVLIIVQC 240
           HHDAFFSPSNSCLLFRSECPRKDNCTAKEWTFPEAKWNTTARVFSHIRLGMGHVLIIVQC
Sbjct: 181 HHDAFFSPSNSCLLFRSECPRKDNCTAKEWTFPEAKWNTTARVFSHIRLGMGHVLIIVQC 240

Query: 241 FISSMANIYNEKILKEGNQLTESIFIQNSKLYFFGILFNGLTLGLQRSNRDQIKNCGFFY 300
           FISSMANIYNEKILKEGNQLTESIFIQNSKLYFFGILFNGLTLGLQRSNRDQIKNCGFFY
Sbjct: 241 FISSMANIYNEKILKEGNQLTESIFIQNSKLYFFGILFNGLTLGLQRSNRDQIKNCGFFY 300

Query: 301 GHSAFSVALIFVTAFQGLSVAFILKFLDNMFHVLMAQVTTVIITTVSVLVFDFRPSLEFF 360
           GHSAFSVALIFVTAFQGLSVAFILKFLDNMFHVLMAQVTTVIITTVSVLVFDFRPSLEFF
Sbjct: 301 GHSAFSVALIFVTAFQGLSVAFILKFLDNMFHVLMAQVTTVIITTVSVLVFDFRPSLEFF 360

Query: 361 LEAPSVLLSIFIYNASKPQVPEYAPRQERIRDLSGNLWERSSGDGEELERLTKPKSDESD 420
           LEAPSVLLSIFIYNASKPQVPEYAPRQERIRDLSGNLWERSSGDGEELERLTKPKSDESD
Sbjct: 361 LEAPSVLLSIFIYNASKPQVPEYAPRQERIRDLSGNLWERSSGDGEELERLTKPKSDESD 420

Query: 421 EDTF 424
           EDTF
Sbjct: 421 EDTF 424


>gi|6912668 solute carrier family 35 member 3A [Homo sapiens]
          Length = 325

 Score =  107 bits (267), Expect = 2e-23
 Identities = 94/353 (26%), Positives = 167/353 (47%), Gaps = 56/353 (15%)

Query: 25  IFIALSSSRILLVKYSAN-EENKYDYLPTTVNVCSELVKLVFCVLVSFCVIKKDHQSRN- 82
           I +  ++S +L ++YS   +E    YL +T  V +EL+K++ C+L+ +   K   ++ N 
Sbjct: 12  ILVFQTTSLVLTMRYSRTLKEEGPRYLSSTAVVVAELLKIMACILLVYKDSKCSLRALNR 71

Query: 83  -LKYASWKEFSDFMKWSIPAFLYFLDNLIVFYVLSYLQPAMAVIFSNFSIITTALLFRIV 141
            L      +  + +K +IP+ +Y L N +++  LS L  A   +     I+TTAL    +
Sbjct: 72  VLHDEILNKPMETLKLAIPSGIYTLQNNLLYVALSNLDAATYQVTYQLKILTTALFSVSM 131

Query: 142 LKRRLNWIQWASLLTLFLSIVALTAGTKTLQHNLAGRGFHHDAFFSPSNSCLLFRSECPR 201
           L ++L   QW       LS+V L  G   +Q               PS+S L        
Sbjct: 132 LSKKLGVYQW-------LSLVILMTGVAFVQW--------------PSDSQL-------- 162

Query: 202 KDNCTAKEWTFPEAKWNTTARVFSHIRLGMGHVLIIVQCFISSMANIYNEKILKEGNQLT 261
                       ++K  +    F      +G + ++  CF S  A +Y EKILKE  Q  
Sbjct: 163 ------------DSKELSAGSQF------VGLMAVLTACFSSGFAGVYFEKILKETKQ-- 202

Query: 262 ESIFIQNSKLYFFGILFNGLTLGLQRSNRDQIKNCGFFYGHSAFSVALIFVTAFQGLSVA 321
            S++I+N +L FFG +F    +G+   + + +   GFF G++  +  ++ + A  GL +A
Sbjct: 203 -SVWIRNIQLGFFGSIFG--LMGVYIYDGELVSKNGFFQGYNRLTWIVVVLQALGGLVIA 259

Query: 322 FILKFLDNMFHVLMAQVTTVIITTVSVL-VFDFRPSLEFFLEAPSVLLSIFIY 373
            ++K+ DN+       ++ ++ T +S   + DF P+  FFL A  V+ + F+Y
Sbjct: 260 AVIKYADNILKGFATSLSIILSTLISYFWLQDFVPTSVFFLGAILVITATFLY 312


>gi|109948265 solute carrier family 35, member A2 isoform c [Homo
           sapiens]
          Length = 393

 Score =  104 bits (259), Expect = 2e-22
 Identities = 88/353 (24%), Positives = 154/353 (43%), Gaps = 56/353 (15%)

Query: 24  AIFIALSSSRILLVKYSANEENKYDYLPTTVNVCSELVKLVFCVLVSFCVIKKD--HQSR 81
           A+ +  ++S IL ++Y+        +  TT  V +E++K + C+L+ F   + +  H   
Sbjct: 41  AVLVVQNASLILSIRYARTLPGDR-FFATTAVVMAEVLKGLTCLLLLFAQKRGNVKHLVL 99

Query: 82  NLKYASWKEFSDFMKWSIPAFLYFLDNLIVFYVLSYLQPAMAVIFSNFSIITTALLFRIV 141
            L  A   ++ D +K ++P+ +Y L N + +  +S L  A   +     I+TTAL   ++
Sbjct: 100 FLHEAVLVQYVDTLKLAVPSLIYTLQNNLQYVAISNLPAATFQVTYQLKILTTALFSVLM 159

Query: 142 LKRRLNWIQWASLLTLFLSIVALTAGTKTLQHNLAGRGFHHDAFFSPSNSCLLFRSECPR 201
           L R L+ +QWASLL LF        G   +Q   AG G       +P             
Sbjct: 160 LNRSLSRLQWASLLLLF-------TGVAIVQAQQAGGGGPRPLDQNP------------- 199

Query: 202 KDNCTAKEWTFPEAKWNTTARVFSHIRLGMGHVLIIVQCFISSMANIYNEKILKEGNQLT 261
                                       G G   ++  C  S  A +Y EKILK  +   
Sbjct: 200 ----------------------------GAGLAAVVASCLSSGFAGVYFEKILKGSSG-- 229

Query: 262 ESIFIQNSKLYFFGILFNGLTLGLQRSNRDQIKNCGFFYGHSAFSVALIFVTAFQGLSVA 321
            S++++N +L  FG       +GL  +    +   GFF+G++     ++   AF GL VA
Sbjct: 230 -SVWLRNLQLGLFGTALG--LVGLWWAEGTAVATRGFFFGYTPAVWGVVLNQAFGGLLVA 286

Query: 322 FILKFLDNMFHVLMAQVTTVIITTVSVLVFDFRPSLEFFLEAPSVLLSIFIYN 374
            ++K+ DN+       ++ V+ T  S+ +F F     F L A  V+ ++++Y+
Sbjct: 287 VVVKYADNILKGFATSLSIVLSTVASIRLFGFHVDPLFALGAGLVIGAVYLYS 339


>gi|5032211 solute carrier family 35, member A2 isoform a [Homo
           sapiens]
          Length = 396

 Score =  104 bits (259), Expect = 2e-22
 Identities = 88/353 (24%), Positives = 154/353 (43%), Gaps = 56/353 (15%)

Query: 24  AIFIALSSSRILLVKYSANEENKYDYLPTTVNVCSELVKLVFCVLVSFCVIKKD--HQSR 81
           A+ +  ++S IL ++Y+        +  TT  V +E++K + C+L+ F   + +  H   
Sbjct: 41  AVLVVQNASLILSIRYARTLPGDR-FFATTAVVMAEVLKGLTCLLLLFAQKRGNVKHLVL 99

Query: 82  NLKYASWKEFSDFMKWSIPAFLYFLDNLIVFYVLSYLQPAMAVIFSNFSIITTALLFRIV 141
            L  A   ++ D +K ++P+ +Y L N + +  +S L  A   +     I+TTAL   ++
Sbjct: 100 FLHEAVLVQYVDTLKLAVPSLIYTLQNNLQYVAISNLPAATFQVTYQLKILTTALFSVLM 159

Query: 142 LKRRLNWIQWASLLTLFLSIVALTAGTKTLQHNLAGRGFHHDAFFSPSNSCLLFRSECPR 201
           L R L+ +QWASLL LF        G   +Q   AG G       +P             
Sbjct: 160 LNRSLSRLQWASLLLLF-------TGVAIVQAQQAGGGGPRPLDQNP------------- 199

Query: 202 KDNCTAKEWTFPEAKWNTTARVFSHIRLGMGHVLIIVQCFISSMANIYNEKILKEGNQLT 261
                                       G G   ++  C  S  A +Y EKILK  +   
Sbjct: 200 ----------------------------GAGLAAVVASCLSSGFAGVYFEKILKGSSG-- 229

Query: 262 ESIFIQNSKLYFFGILFNGLTLGLQRSNRDQIKNCGFFYGHSAFSVALIFVTAFQGLSVA 321
            S++++N +L  FG       +GL  +    +   GFF+G++     ++   AF GL VA
Sbjct: 230 -SVWLRNLQLGLFGTALG--LVGLWWAEGTAVATRGFFFGYTPAVWGVVLNQAFGGLLVA 286

Query: 322 FILKFLDNMFHVLMAQVTTVIITTVSVLVFDFRPSLEFFLEAPSVLLSIFIYN 374
            ++K+ DN+       ++ V+ T  S+ +F F     F L A  V+ ++++Y+
Sbjct: 287 VVVKYADNILKGFATSLSIVLSTVASIRLFGFHVDPLFALGAGLVIGAVYLYS 339


>gi|5453621 solute carrier family 35 (CMP-sialic acid transporter),
           member A1 [Homo sapiens]
          Length = 337

 Score =  100 bits (248), Expect = 3e-21
 Identities = 88/355 (24%), Positives = 157/355 (44%), Gaps = 64/355 (18%)

Query: 24  AIFIALSSSRILLVKYSANEENKYDYLPTTVNVCSELVKLVFCVLVSFCVIKKDHQSRNL 83
           A+   +++   + ++Y+   + +  Y  TT    +E++KL    L+S  ++ K+  S   
Sbjct: 18  AVMTLMAAVYTIALRYTRTSDKEL-YFSTTAVCITEVIKL----LLSVGILAKETGSLGR 72

Query: 84  KYASWKEF-----SDFMKWSIPAFLYFLDNLIVFYVLSYLQPAMAVIFSNFSIITTALLF 138
             AS +E       + +K S+P+ +Y + N + F  LS L  A+  +     I  TAL  
Sbjct: 73  FKASLRENVLGSPKELLKLSVPSLVYAVQNNMAFLALSNLDAAVYQVTYQLKIPCTALCT 132

Query: 139 RIVLKRRLNWIQWASLLTLFLSIVALTAGTKTLQHNLAGRGFHHDAFFSPSNSCLLFRSE 198
            ++L R L+ +QW S+  L   +                                     
Sbjct: 133 VLMLNRTLSKLQWVSVFMLCAGV------------------------------------- 155

Query: 199 CPRKDNCTAKEWTFPEAKWNTTARVFSHIRLGMGHVLIIVQCFISSMANIYNEKILKEGN 258
                  T  +W   +A   T   V  +  LG G + I V C  S  A +Y EK+LK  +
Sbjct: 156 -------TLVQWKPAQA---TKVVVEQNPLLGFGAIAIAVLC--SGFAGVYFEKVLKSSD 203

Query: 259 QLTESIFIQNSKLYFFGILFNGLTLGLQRSNRDQIKNCGFFYGHSAFSVALIFVTAFQGL 318
               S++++N ++Y  GI+      G+  S+  +IK  GFFYG++ +   +IF+ +  GL
Sbjct: 204 T---SLWVRNIQMYLSGIIVT--LAGVYLSDGAEIKEKGFFYGYTYYVWFVIFLASVGGL 258

Query: 319 SVAFILKFLDNMFHVLMAQVTTVIITTVSVLVFDFRPSLEFFLEAPSVLLSIFIY 373
             + ++K+ DN+     A    V+ T  SV++F  + +L F L    V +SI++Y
Sbjct: 259 YTSVVVKYTDNIMKGFSAAAAIVLSTIASVMLFGLQITLTFALGTLLVCVSIYLY 313


>gi|18087849 solute carrier family 35, member A4 [Homo sapiens]
          Length = 324

 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 74/334 (22%), Positives = 141/334 (42%), Gaps = 52/334 (15%)

Query: 44  ENKYDYLPTTVNVCSELVKLVFCVLVSFCVIKKDHQSRNLKYASWKEFSDFMKWSIPAFL 103
           + +  + P++  + +EL KL+ C       +    Q+       W++ + F   ++ A L
Sbjct: 43  DGRVPFRPSSAVLLTELTKLLLCAFS----LLVGWQAWPQGPPPWRQAAPF---ALSALL 95

Query: 104 YFLDNLIVFYVLSYLQPAMAVIFSNFSIITTALLFRIVLKRRLNWIQWASLLTLFLSIVA 163
           Y  +N +V Y+  Y+ P+   + SN  I +TA+L+ + L+ RL+  Q  +LL L  +   
Sbjct: 96  YGANNNLVIYLQRYMDPSTYQVLSNLKIGSTAVLYCLCLRHRLSVRQGLALLLLMAAGAC 155

Query: 164 LTAGTKTLQHNLAGRGFHHDAFFSPSNSCLLFRSECPRKDNCTAKEWTFPEAKWNTTARV 223
             AG   +  N             PS       S  P                       
Sbjct: 156 YAAGGLQVPGNTL-----------PSPPPAAAASPMPL---------------------- 182

Query: 224 FSHIRLGMGHVLIIVQCFISSMANIYNEKILKEGNQLTESIFIQNSKLYFFGILFNGLTL 283
             HI   +G +L+I+ C IS ++++Y E ++K        + +QN  LY FG+L N   L
Sbjct: 183 --HIT-PLGLLLLILYCLISGLSSVYTELLMKRQRL---PLALQNLFLYTFGVLLN---L 233

Query: 284 GLQRSNRDQIKNCGFFYGHSAFSVALIFVTAFQGLSVAFILKFLDNMFHVLMAQVTTVII 343
           GL           G   G S ++  ++   A  GL ++ ++K   ++  + +   + V+ 
Sbjct: 234 GLHAGGG---SGPGLLEGFSGWAALVVLSQALNGLLMSAVMKHGSSITRLFVVSCSLVVN 290

Query: 344 TTVSVLVFDFRPSLEFFLEAPSVLLSIFIYNASK 377
             +S ++   + +  FFL    + L++ +Y  S+
Sbjct: 291 AVLSAVLLRLQLTAAFFLATLLIGLAMRLYYGSR 324


>gi|14028875 solute carrier family 35 (UDP-glucuronic
           acid/UDP-N-acetylgalactosamine dual transporter), member
           D1 [Homo sapiens]
          Length = 355

 Score = 32.7 bits (73), Expect = 0.64
 Identities = 41/171 (23%), Positives = 72/171 (42%), Gaps = 24/171 (14%)

Query: 16  TMYTFLLGAIFIALSSSRILLVKYSANEENKYDYLPTTVNVCSELVKLVFCVLVSFC--- 72
           T++  LL A F  +SS  I++V  S     ++       ++C  L ++V  V V +    
Sbjct: 38  TVFLKLLAAGFYGVSSFLIVVVNKSVLTNYRFPS-----SLCVGLGQMVATVAVLWVGKA 92

Query: 73  --VIKKDHQSRNLKYASWKEFSDFMKWSIPAFLYFLDNLIVFYVLSYLQPAMAVIFSNFS 130
             V+K     RN+   ++          +P  LYF + +   +    L   M  +   FS
Sbjct: 93  LRVVKFPDLDRNVPRKTFP---------LP-LLYFGNQITGLFSTKKLNLPMFTVLRRFS 142

Query: 131 IITTALLFRIVLKRRLNWIQWASLLTLFLSIV-ALTAGTKTLQHNLAGRGF 180
           I+ T     ++LK+  +   W   +T+F  I+ A  A +  L  +L G  F
Sbjct: 143 ILFTMFAEGVLLKKTFS---WGIKMTVFAMIIGAFVAASSDLAFDLEGYAF 190


>gi|42741659 ATP-binding cassette, subfamily B, member 1 [Homo
           sapiens]
          Length = 1280

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 12/131 (9%)

Query: 276 ILFNGLTLGLQRSNR--DQIKNCGFFYGHSAFSVALIFVTAFQGLSVAFILKFLDNMFHV 333
           I F G    L+R N+  ++ K  G      A +  +    AF  +  ++ L F      V
Sbjct: 265 IAFGGQKKELERYNKNLEEAKRIGI---KKAITANISIGAAFLLIYASYALAFWYGTTLV 321

Query: 334 LMAQVTTVIITTV--SVLVFDFR-----PSLEFFLEAPSVLLSIFIYNASKPQVPEYAPR 386
           L  + +   + TV  SVL+  F      PS+E F  A      IF    +KP +  Y+  
Sbjct: 322 LSGEYSIGQVLTVFFSVLIGAFSVGQASPSIEAFANARGAAYEIFKIIDNKPSIDSYSKS 381

Query: 387 QERIRDLSGNL 397
             +  ++ GNL
Sbjct: 382 GHKPDNIKGNL 392


>gi|24497587 adenylate cyclase 4 [Homo sapiens]
          Length = 1077

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 18/114 (15%)

Query: 76  KDHQSRNLKYASWKEFSDFMKWSIPAFLY--------FLDNLIVFYVLSYLQPAMAVIFS 127
           KD     L +   +   ++   +IPAF Y        FL N I+  +++   PA+A+ +S
Sbjct: 558 KDFNPLTLYFREKEMEKEYRLSAIPAFKYYEACTFLVFLSNFIIQMLVTNRPPALAITYS 617

Query: 128 NFSIITTALLF--------RIVLK--RRLNWIQWASLLTLFLSIVALTAGTKTL 171
              ++   +LF        R VLK  + L+W+   S L      + +  GT T+
Sbjct: 618 ITFLLFLLILFVCFSEDLMRCVLKGPKMLHWLPALSGLVATRPGLRIALGTATI 671


>gi|226342941 zinc finger, DHHC-type containing 15 isoform 2 [Homo
           sapiens]
          Length = 328

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 16/71 (22%), Positives = 36/71 (50%), Gaps = 5/71 (7%)

Query: 66  CVLVSFCVIKKDHQ----SRNLKYASWKEFSDFMKWSIPAFLYFLDNLIVFYVLSYLQPA 121
           C + + CV+K DH     +  + ++++K F  F+ +S+   LY +   +  Y + Y +  
Sbjct: 136 CSVCAMCVLKMDHHCPWVNNCIGFSNYKFFLQFLAYSVLYCLY-IATTVFSYFIKYWRGE 194

Query: 122 MAVIFSNFSII 132
           +  + S F ++
Sbjct: 195 LPSVRSKFHVL 205


>gi|21450653 zinc finger, DHHC-type containing 15 isoform 1 [Homo
           sapiens]
          Length = 337

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 16/71 (22%), Positives = 36/71 (50%), Gaps = 5/71 (7%)

Query: 66  CVLVSFCVIKKDHQ----SRNLKYASWKEFSDFMKWSIPAFLYFLDNLIVFYVLSYLQPA 121
           C + + CV+K DH     +  + ++++K F  F+ +S+   LY +   +  Y + Y +  
Sbjct: 145 CSVCAMCVLKMDHHCPWVNNCIGFSNYKFFLQFLAYSVLYCLY-IATTVFSYFIKYWRGE 203

Query: 122 MAVIFSNFSII 132
           +  + S F ++
Sbjct: 204 LPSVRSKFHVL 214


>gi|52317200 olfactory receptor, family 2, subfamily M, member 3
           [Homo sapiens]
          Length = 312

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 8/57 (14%)

Query: 305 FSVALIFVTAFQGLSVAFILKFLDNMFH----VLMAQVT----TVIITTVSVLVFDF 353
           F V  IF  AF G SV  +L +LD   H    +L++Q++     +I TTV  + F++
Sbjct: 29  FLVLAIFSVAFMGNSVMVLLIYLDTQLHTPMYLLLSQLSLMDLMLICTTVPKMAFNY 85


>gi|52317204 olfactory receptor, family 2, subfamily M, member 2
           [Homo sapiens]
          Length = 347

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 8/57 (14%)

Query: 305 FSVALIFVTAFQGLSVAFILKFLDNMFHV----LMAQVT----TVIITTVSVLVFDF 353
           F V  IF+ AF G SV  +L +LD   H     L++Q++     +I TTV  + F++
Sbjct: 29  FLVLGIFLVAFMGNSVMVLLIYLDTQLHTPMYFLLSQLSLMDLMLICTTVPKMAFNY 85


>gi|52317209 olfactory receptor, family 2, subfamily M, member 7
           [Homo sapiens]
          Length = 312

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 8/57 (14%)

Query: 305 FSVALIFVTAFQGLSVAFILKFLDNMFHV----LMAQVT----TVIITTVSVLVFDF 353
           F V  IF  AF G S+  +L +LD   H     L++Q++     +I TTV  + F++
Sbjct: 29  FLVLAIFSVAFMGNSIMVLLIYLDTQLHTPMYFLLSQLSLMDLMLICTTVPKMAFNY 85


>gi|52317206 olfactory receptor, family 2, subfamily M, member 5
           [Homo sapiens]
          Length = 312

 Score = 28.9 bits (63), Expect = 9.2
 Identities = 17/55 (30%), Positives = 25/55 (45%)

Query: 305 FSVALIFVTAFQGLSVAFILKFLDNMFHVLMAQVTTVIITTVSVLVFDFRPSLEF 359
           F V  IF  AF G SV  +L +LD   H  M  + + +     +L+    P + F
Sbjct: 29  FLVLAIFSVAFMGNSVMVLLIYLDTQLHTPMYFLLSQLFLMDLMLICSTVPKMAF 83


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.327    0.138    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,882,384
Number of Sequences: 37866
Number of extensions: 604696
Number of successful extensions: 1815
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1793
Number of HSP's gapped (non-prelim): 24
length of query: 424
length of database: 18,247,518
effective HSP length: 105
effective length of query: 319
effective length of database: 14,271,588
effective search space: 4552636572
effective search space used: 4552636572
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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