Guide to the Human Genome
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Search of human proteins with 8922699

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|8922699 CNDP dipeptidase 2 [Homo sapiens]
         (475 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|8922699 CNDP dipeptidase 2 [Homo sapiens]                          967   0.0  
gi|21071039 carnosinase 1 [Homo sapiens]                              526   e-149
gi|47458827 peptidase M20 domain containing 1 [Homo sapiens]           58   2e-08
gi|20149633 evolutionarily conserved signaling intermediate in T...    30   3.7  
gi|215599070 evolutionarily conserved signaling intermediate in ...    30   3.7  
gi|50348611 mitochondrial tumor suppressor 1 isoform 1 [Homo sap...    30   4.8  
gi|50348617 mitochondrial tumor suppressor 1 isoform 2 [Homo sap...    30   4.8  

>gi|8922699 CNDP dipeptidase 2 [Homo sapiens]
          Length = 475

 Score =  967 bits (2500), Expect = 0.0
 Identities = 475/475 (100%), Positives = 475/475 (100%)

Query: 1   MAALTTLFKYIDENQDRYIKKLAKWVAIQSVSAWPEKRGEIRRMMEVAAADVKQLGGSVE 60
           MAALTTLFKYIDENQDRYIKKLAKWVAIQSVSAWPEKRGEIRRMMEVAAADVKQLGGSVE
Sbjct: 1   MAALTTLFKYIDENQDRYIKKLAKWVAIQSVSAWPEKRGEIRRMMEVAAADVKQLGGSVE 60

Query: 61  LVDIGKQKLPDGSEIPLPPILLGRLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLVE 120
           LVDIGKQKLPDGSEIPLPPILLGRLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLVE
Sbjct: 61  LVDIGKQKLPDGSEIPLPPILLGRLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLVE 120

Query: 121 RDGKLYGGGSTDDKGPVAGWINALEAYQKTGQEIPVNVRFCLEGMEESGSEGLDELIFAR 180
           RDGKLYGGGSTDDKGPVAGWINALEAYQKTGQEIPVNVRFCLEGMEESGSEGLDELIFAR
Sbjct: 121 RDGKLYGGGSTDDKGPVAGWINALEAYQKTGQEIPVNVRFCLEGMEESGSEGLDELIFAR 180

Query: 181 KDTFFKDVDYVCISDNYWLGKKKPCITYGLRGICYFFIEVECSNKDLHSGVYGGSVHEAM 240
           KDTFFKDVDYVCISDNYWLGKKKPCITYGLRGICYFFIEVECSNKDLHSGVYGGSVHEAM
Sbjct: 181 KDTFFKDVDYVCISDNYWLGKKKPCITYGLRGICYFFIEVECSNKDLHSGVYGGSVHEAM 240

Query: 241 TDLILLMGSLVDKRGNILIPGINEAVAAVTEEEHKLYDDIDFDIEEFAKDVGAQILLHSH 300
           TDLILLMGSLVDKRGNILIPGINEAVAAVTEEEHKLYDDIDFDIEEFAKDVGAQILLHSH
Sbjct: 241 TDLILLMGSLVDKRGNILIPGINEAVAAVTEEEHKLYDDIDFDIEEFAKDVGAQILLHSH 300

Query: 301 KKDILMHRWRYPSLSLHGIEGAFSGSGAKTVIPRKVVGKFSIRLVPNMTPEVVGEQVTSY 360
           KKDILMHRWRYPSLSLHGIEGAFSGSGAKTVIPRKVVGKFSIRLVPNMTPEVVGEQVTSY
Sbjct: 301 KKDILMHRWRYPSLSLHGIEGAFSGSGAKTVIPRKVVGKFSIRLVPNMTPEVVGEQVTSY 360

Query: 361 LTKKFAELRSPNEFKVYMGHGGKPWVSDFSHPHYLAGRRAMKTVFGVEPDLTREGGSIPV 420
           LTKKFAELRSPNEFKVYMGHGGKPWVSDFSHPHYLAGRRAMKTVFGVEPDLTREGGSIPV
Sbjct: 361 LTKKFAELRSPNEFKVYMGHGGKPWVSDFSHPHYLAGRRAMKTVFGVEPDLTREGGSIPV 420

Query: 421 TLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRYNYIEGTKMLAAYLYEVSQLKD 475
           TLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRYNYIEGTKMLAAYLYEVSQLKD
Sbjct: 421 TLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRYNYIEGTKMLAAYLYEVSQLKD 475


>gi|21071039 carnosinase 1 [Homo sapiens]
          Length = 507

 Score =  526 bits (1354), Expect = e-149
 Identities = 251/474 (52%), Positives = 336/474 (70%), Gaps = 2/474 (0%)

Query: 2   AALTTLFKYIDENQDRYIKKLAKWVAIQS--VSAWPEKRGEIRRMMEVAAADVKQLGGSV 59
           A L  +F+YID +QD +++ L +WVAI+S  V   P  R E+ RMM VAA  +++LG  V
Sbjct: 33  ALLEKVFQYIDLHQDEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAADTLQRLGARV 92

Query: 60  ELVDIGKQKLPDGSEIPLPPILLGRLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLV 119
             VD+G Q+LPDG  +P+PP++L  LGSDP K TVC YGHLDVQPA   DGW ++P+ L 
Sbjct: 93  ASVDMGPQQLPDGQSLPIPPVILAELGSDPTKGTVCFYGHLDVQPADRGDGWLTDPYVLT 152

Query: 120 ERDGKLYGGGSTDDKGPVAGWINALEAYQKTGQEIPVNVRFCLEGMEESGSEGLDELIFA 179
           E DGKLYG G+TD+KGPV  WINA+ A++   Q++PVN++F +EGMEE+GS  L+EL+  
Sbjct: 153 EVDGKLYGRGATDNKGPVLAWINAVSAFRALEQDLPVNIKFIIEGMEEAGSVALEELVEK 212

Query: 180 RKDTFFKDVDYVCISDNYWLGKKKPCITYGLRGICYFFIEVECSNKDLHSGVYGGSVHEA 239
            KD FF  VDY+ ISDN W+ ++KP ITYG RG  YF +EV+C ++D HSG +GG +HE 
Sbjct: 213 EKDRFFSGVDYIVISDNLWISQRKPAITYGTRGNSYFMVEVKCRDQDFHSGTFGGILHEP 272

Query: 240 MTDLILLMGSLVDKRGNILIPGINEAVAAVTEEEHKLYDDIDFDIEEFAKDVGAQILLHS 299
           M DL+ L+GSLVD  G+IL+PGI + V  +TEEE   Y  I  D+EE+      +  L  
Sbjct: 273 MADLVALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRNSSRVEKFLFD 332

Query: 300 HKKDILMHRWRYPSLSLHGIEGAFSGSGAKTVIPRKVVGKFSIRLVPNMTPEVVGEQVTS 359
            K++ILMH WRYPSLS+HGIEGAF   G KTVIP +V+GKFSIRLVP+M    V +QVT 
Sbjct: 333 TKEEILMHLWRYPSLSIHGIEGAFDEPGTKTVIPGRVIGKFSIRLVPHMNVSAVEKQVTR 392

Query: 360 YLTKKFAELRSPNEFKVYMGHGGKPWVSDFSHPHYLAGRRAMKTVFGVEPDLTREGGSIP 419
           +L   F++  S N+  V M  G  PW+++     YLA +RA++TVFG EPD+ R+G +IP
Sbjct: 393 HLEDVFSKRNSSNKMVVSMTLGLHPWIANIDDTQYLAAKRAIRTVFGTEPDMIRDGSTIP 452

Query: 420 VTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRYNYIEGTKMLAAYLYEVSQL 473
           +   FQE   K+V+L+P+G+ DDG HSQNEK+NR+NYIEGTK+ AA+  E++QL
Sbjct: 453 IAKMFQEIVHKSVVLIPLGAVDDGEHSQNEKINRWNYIEGTKLFAAFFLEMAQL 506


>gi|47458827 peptidase M20 domain containing 1 [Homo sapiens]
          Length = 502

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 28/60 (46%), Positives = 37/60 (61%), Gaps = 1/60 (1%)

Query: 86  GSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLVERDGKLYGGGSTDDKGPVAGWINALE 145
           GSDP  +   +  H DV PA  E+GW+  PF+ +ERDG +YG G+ DDK  V   + ALE
Sbjct: 112 GSDPSLQPYLLMAHFDVVPAP-EEGWEVPPFSGLERDGVIYGRGTLDDKNSVMALLQALE 170


>gi|20149633 evolutionarily conserved signaling intermediate in Toll
           pathway isoform 1 [Homo sapiens]
          Length = 431

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 4/84 (4%)

Query: 96  IYGHLDVQPAALEDGWDSEPFTLVE-RDGKLYGG--GSTDDKGPVAGWINALEAYQKTGQ 152
           +Y  + +    +  GWD+  F + E  +G ++        D+  +A WI  L+    T  
Sbjct: 326 LYYPMQLDLEYVRSGWDNYEFDINEVEEGPVFAMCMAGAHDQATMAKWIQGLQETNPTLA 385

Query: 153 EIPVNVRFCLEGME-ESGSEGLDE 175
           +IPV  R      E ++ S GL+E
Sbjct: 386 QIPVVFRLAGSTRELQTSSAGLEE 409


>gi|215599070 evolutionarily conserved signaling intermediate in
           Toll pathway isoform 3 [Homo sapiens]
          Length = 217

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 4/84 (4%)

Query: 96  IYGHLDVQPAALEDGWDSEPFTLVE-RDGKLYGG--GSTDDKGPVAGWINALEAYQKTGQ 152
           +Y  + +    +  GWD+  F + E  +G ++        D+  +A WI  L+    T  
Sbjct: 112 LYYPMQLDLEYVRSGWDNYEFDINEVEEGPVFAMCMAGAHDQATMAKWIQGLQETNPTLA 171

Query: 153 EIPVNVRFCLEGME-ESGSEGLDE 175
           +IPV  R      E ++ S GL+E
Sbjct: 172 QIPVVFRLAGSTRELQTSSAGLEE 195


>gi|50348611 mitochondrial tumor suppressor 1 isoform 1 [Homo
           sapiens]
          Length = 1270

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 4/57 (7%)

Query: 250 LVDKRGNILIPGINEAVAAVTEEEHKLYDDIDFDIEEFAKDVGAQILLHSHKKDILM 306
           L+D    +++P  +++ A V   EHK+ +  D  +    KD+G Q    +H  ++++
Sbjct: 345 LIDDECPLMVPAFDKSEAQVLNPEHKVTETEDTQMVSKGKDLGTQ----NHTSELIL 397


>gi|50348617 mitochondrial tumor suppressor 1 isoform 2 [Homo
           sapiens]
          Length = 1216

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 4/57 (7%)

Query: 250 LVDKRGNILIPGINEAVAAVTEEEHKLYDDIDFDIEEFAKDVGAQILLHSHKKDILM 306
           L+D    +++P  +++ A V   EHK+ +  D  +    KD+G Q    +H  ++++
Sbjct: 345 LIDDECPLMVPAFDKSEAQVLNPEHKVTETEDTQMVSKGKDLGTQ----NHTSELIL 397


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.138    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,386,978
Number of Sequences: 37866
Number of extensions: 868656
Number of successful extensions: 1710
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1703
Number of HSP's gapped (non-prelim): 7
length of query: 475
length of database: 18,247,518
effective HSP length: 106
effective length of query: 369
effective length of database: 14,233,722
effective search space: 5252243418
effective search space used: 5252243418
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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