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Search of human proteins with 8922303
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|8922303 ATP5S-like [Homo sapiens]
(257 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|8922303 ATP5S-like [Homo sapiens] 536 e-153
gi|51558774 ATP synthase, H+ transporting, mitochondrial F0 comp... 69 4e-12
gi|24025682 F-box and leucine-rich repeat protein 16 [Homo sapiens] 51 1e-06
gi|157168349 F-box and leucine-rich repeat protein 19 [Homo sapi... 42 7e-04
gi|22748931 F-box and leucine-rich repeat protein 14 [Homo sapiens] 40 0.002
gi|161333852 F-box and leucine-rich repeat protein 13 isoform 1 ... 40 0.003
gi|16306588 F-box and leucine-rich repeat protein 4 [Homo sapiens] 38 0.008
gi|27734755 F-box and leucine-rich repeat protein 20 [Homo sapiens] 38 0.010
gi|6912466 F-box and leucine-rich repeat protein 7 [Homo sapiens] 37 0.013
gi|190194416 F-box and leucine-rich repeat protein 15 [Homo sapi... 37 0.017
gi|16306582 F-box and leucine-rich repeat protein 2 [Homo sapiens] 36 0.029
gi|188219559 protein phosphatase 1, regulatory subunit 15B [Homo... 34 0.11
gi|161333854 F-box and leucine-rich repeat protein 13 isoform 2 ... 33 0.19
gi|254039600 F-box and leucine-rich repeat protein 17 [Homo sapi... 28 6.0
gi|51873034 F-box and leucine-rich repeat protein 9 [Homo sapiens] 28 6.0
gi|16306591 F-box and leucine-rich repeat protein 9 [Homo sapiens] 28 6.0
gi|41872631 fatty acid synthase [Homo sapiens] 28 7.9
>gi|8922303 ATP5S-like [Homo sapiens]
Length = 257
Score = 536 bits (1382), Expect = e-153
Identities = 257/257 (100%), Positives = 257/257 (100%)
Query: 1 MAAPWASLRLVAPMWNGRIRGIHRLGAAVAPEGSQKKKRTILQFLTNYFYDVEALRDYLL 60
MAAPWASLRLVAPMWNGRIRGIHRLGAAVAPEGSQKKKRTILQFLTNYFYDVEALRDYLL
Sbjct: 1 MAAPWASLRLVAPMWNGRIRGIHRLGAAVAPEGSQKKKRTILQFLTNYFYDVEALRDYLL 60
Query: 61 QREMYKVHEKNRSYTWLEKQHGPYGAGAFFILKQGGAVKFRDKEWIRPDKYGHFSQEFWN 120
QREMYKVHEKNRSYTWLEKQHGPYGAGAFFILKQGGAVKFRDKEWIRPDKYGHFSQEFWN
Sbjct: 61 QREMYKVHEKNRSYTWLEKQHGPYGAGAFFILKQGGAVKFRDKEWIRPDKYGHFSQEFWN 120
Query: 121 FCEVPVEAVDAGDCDINYEGLDNLLRLKELQSLSLQRCSHVDDWCLSRLYPLADSLQELS 180
FCEVPVEAVDAGDCDINYEGLDNLLRLKELQSLSLQRCSHVDDWCLSRLYPLADSLQELS
Sbjct: 121 FCEVPVEAVDAGDCDINYEGLDNLLRLKELQSLSLQRCSHVDDWCLSRLYPLADSLQELS 180
Query: 181 LAGCPRISERGLACLHHLQNLRRLDISDLPAVSNPGLTQILVEEMLPNCEVVGVDWAEGL 240
LAGCPRISERGLACLHHLQNLRRLDISDLPAVSNPGLTQILVEEMLPNCEVVGVDWAEGL
Sbjct: 181 LAGCPRISERGLACLHHLQNLRRLDISDLPAVSNPGLTQILVEEMLPNCEVVGVDWAEGL 240
Query: 241 KSGPEEQPRDTASPVPA 257
KSGPEEQPRDTASPVPA
Sbjct: 241 KSGPEEQPRDTASPVPA 257
>gi|51558774 ATP synthase, H+ transporting, mitochondrial F0
complex, subunit s isoform a precursor [Homo sapiens]
Length = 215
Score = 68.9 bits (167), Expect = 4e-12
Identities = 44/153 (28%), Positives = 82/153 (53%), Gaps = 6/153 (3%)
Query: 82 GPYGAGAFFILKQGGAVKFRDKEWIRPDKYGHFSQEFWNFCEVPVEAVDAGDCDINYEGL 141
GP A + ++L+ G V++ +E + D Y H + + ++A+DA D I G
Sbjct: 61 GPDRAASEWLLRCGAMVRYHGQERWQKD-YNHLPTGPLD--KYKIQAIDATDSCIMSIGF 117
Query: 142 DNLLRLKELQSLSLQRCSHVDDWCLSRLYPLAD---SLQELSLAGCPRISERGLACLHHL 198
D++ L+ ++ + L +C +++D CL RL L + ++ E+ + C I+++G+ L HL
Sbjct: 118 DHMEGLEHVEKIRLCKCHYIEDDCLLRLSQLENLQKTILEMEIISCGNITDKGIIALRHL 177
Query: 199 QNLRRLDISDLPAVSNPGLTQILVEEMLPNCEV 231
+NL+ L +SDLP V + LP+ E+
Sbjct: 178 RNLKYLLLSDLPGVREKENLVQAFKTALPSLEL 210
>gi|24025682 F-box and leucine-rich repeat protein 16 [Homo sapiens]
Length = 479
Score = 50.8 bits (120), Expect = 1e-06
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 140 GLDNLLRLKELQSLSLQRCSHVDDWCLSRLYPLADSLQELSLAGCPRISERGLACLHHLQ 199
GL L + L+SL L+ C V D+ L L L SL+ LS AGCP ++ GL+ L LQ
Sbjct: 389 GLSYLSTMSSLRSLYLRWCCQVQDFGLKHLLALG-SLRLLSPAGCPLLTTTGLSGLVQLQ 447
Query: 200 NLRRLDISDLPAVSNPGLTQILVEEMLPNCEVV 232
L L++++ P + P L + + LP C V+
Sbjct: 448 ELEELELTNCPG-ATPELFKYF-SQHLPRCLVI 478
Score = 38.5 bits (88), Expect = 0.006
Identities = 25/75 (33%), Positives = 39/75 (52%)
Query: 147 LKELQSLSLQRCSHVDDWCLSRLYPLADSLQELSLAGCPRISERGLACLHHLQNLRRLDI 206
L++L+SL L C + D L + L+EL L C RI++ GL+ L + +LR L +
Sbjct: 345 LRKLRSLDLSWCPRITDMALEYVACDLHRLEELVLDRCVRITDTGLSYLSTMSSLRSLYL 404
Query: 207 SDLPAVSNPGLTQIL 221
V + GL +L
Sbjct: 405 RWCCQVQDFGLKHLL 419
Score = 33.5 bits (75), Expect = 0.19
Identities = 26/116 (22%), Positives = 52/116 (44%), Gaps = 4/116 (3%)
Query: 106 IRPDKYGHFSQEFWNFCEVPVEAVDAGDCDINYEGLDNLLRLKELQSLSLQRCSHVDDWC 165
+ D SQ N E+ ++A D + Y + +L L C + +
Sbjct: 255 VADDAIAAISQLLPNLAELSLQAYHVTDTALAYF---TARQGHSTHTLRLLSCWEITNHG 311
Query: 166 LSRLYPLADSLQELSLAGCPRISERGLACL-HHLQNLRRLDISDLPAVSNPGLTQI 220
+ + +L LSL+GC ++++ G+ + +L+ LR LD+S P +++ L +
Sbjct: 312 VVNVVHSLPNLTALSLSGCSKVTDDGVELVAENLRKLRSLDLSWCPRITDMALEYV 367
>gi|157168349 F-box and leucine-rich repeat protein 19 [Homo
sapiens]
Length = 694
Score = 41.6 bits (96), Expect = 7e-04
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 149 ELQSLSLQRCSHVDDWCLSRLY----PLADSLQELSLAGCPRISERGLACLHHLQNLRRL 204
+L +L L C+HV D + L PL ++L L+LAGC R+++ L LRRL
Sbjct: 598 QLSALDLSHCAHVGDPSVHLLTAPTSPLRETLVHLNLAGCHRLTDHCLPLFRRCPRLRRL 657
Query: 205 DI 206
D+
Sbjct: 658 DL 659
>gi|22748931 F-box and leucine-rich repeat protein 14 [Homo sapiens]
Length = 418
Score = 40.0 bits (92), Expect = 0.002
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 150 LQSLSLQRCSHVDDWCLSRLYPLADSLQELSLAGCPRISERGLACLHHLQNLRRLDISDL 209
L+ L+LQ C + D L + L+ L+L+ C IS+ GL L H+ +LR L++
Sbjct: 204 LEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSC 263
Query: 210 PAVSNPGLTQI 220
+S+ G+ +
Sbjct: 264 DNISDTGIMHL 274
Score = 37.4 bits (85), Expect = 0.013
Identities = 21/74 (28%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 134 CDINYEGLDNLLR-LKELQSLSLQRCSHVDDWCLSRLYPLADSLQELSLAGCPRISERGL 192
C I+ +G++ ++R + L++L++ +C + D L + L + L GC RI++RGL
Sbjct: 315 CHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKRGL 374
Query: 193 ACLHHLQNLRRLDI 206
+ L L+ L++
Sbjct: 375 ERITQLPCLKVLNL 388
>gi|161333852 F-box and leucine-rich repeat protein 13 isoform 1
[Homo sapiens]
Length = 735
Score = 39.7 bits (91), Expect = 0.003
Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 35/161 (21%)
Query: 128 AVDAGDCDINYEGLDNLLRLKELQSLSLQRCSHVDD-----WCLSRLY----------PL 172
++D DI+ EGL+ L R K+L+ LS+ C + D +C S L L
Sbjct: 534 SIDLSGTDISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCKSSLILEHLDVSYCSQL 593
Query: 173 AD-----------SLQELSLAGCPRISERGLACLH-HLQNLRRLDISDLPAVSNP----- 215
+D +L LS+AGCP+I++ + L L LDIS +++
Sbjct: 594 SDMIIKALAIYCINLTSLSIAGCPKITDSAMEMLSAKCHYLHILDISGCVLLTDQILEDL 653
Query: 216 --GLTQILVEEMLPNCEVVGVDWAEGLKSGPEEQPRDTASP 254
G Q+ + +M C + A+ + S ++Q +T P
Sbjct: 654 QIGCKQLRILKM-QYCTNISKKAAQRMSSKVQQQEYNTNDP 693
Score = 33.5 bits (75), Expect = 0.19
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 150 LQSLSLQRCSHVDDWCLSRLYPLADSLQELSLAGCPRISERGLACLHHLQNLRRLDISDL 209
++ L+L C + D + +L +L LSL C ++ +G+ + ++ +L +D+S
Sbjct: 481 IRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFSLVSIDLSGT 540
Query: 210 PAVSNPGLTQILVEEMLPNCEV 231
+SN GL + + L V
Sbjct: 541 D-ISNEGLNVLSRHKKLKELSV 561
Score = 30.0 bits (66), Expect = 2.1
Identities = 37/152 (24%), Positives = 61/152 (40%), Gaps = 33/152 (21%)
Query: 97 AVKFRDKEWIRPDKYGHFSQEFWNFCEVPVEAVDAGDCDINYEGLDNLLRLKELQSLSLQ 156
A+ F + + PDKY + + W + V ++ C + + ++ + LQ L++
Sbjct: 197 AIDFSSVKNVIPDKYIVSTLQRWR---LNVLRLNFRGCLLRPKTFRSVSHCRNLQELNVS 253
Query: 157 RCS--------HVDDWC----------------LSRLYPLA-DSLQELSLAGCPRISERG 191
C H+ + C RL P +LQ LSLA C R +++G
Sbjct: 254 DCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLAYCRRFTDKG 313
Query: 192 LACLHHLQNLRRLDISDLPAVSNPGLTQILVE 223
L L+ +L DL G TQI V+
Sbjct: 314 LQYLNLGNGCHKLIYLDL-----SGCTQISVQ 340
>gi|16306588 F-box and leucine-rich repeat protein 4 [Homo sapiens]
Length = 621
Score = 38.1 bits (87), Expect = 0.008
Identities = 29/118 (24%), Positives = 60/118 (50%), Gaps = 15/118 (12%)
Query: 120 NFCEVPVEAVDAGDCDI--NYEGLDNLL--RLKELQSLSLQRCSHVDDWCLSRLYPLADS 175
NFC ++ + G C + +Y+ + +++ + K+L++L L RC ++ + ++ L
Sbjct: 448 NFCS-ELQHLSLGSCVMIEDYDVIASMIGAKCKKLRTLDLWRCKNITENGIAELASGCPL 506
Query: 176 LQELSLAGCPRISERGLACL----HHLQNLRRLDISDLPAVSNPGLTQILVEEMLPNC 229
L+EL L CP + + C H L NL++L ++ +N + ++E+ NC
Sbjct: 507 LEELDLGWCPTL-QSSTGCFTRLAHQLPNLQKLFLT-----ANRSVCDTDIDELACNC 558
Score = 30.4 bits (67), Expect = 1.6
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 136 INYEGLDNLLRL--KELQSLSLQRCSH-VDDWCLSRLYPLADSLQELSLAGCPRISERGL 192
I+ G L++ EL L L CSH +++ CL + + +LQ L+L+ C ++ +
Sbjct: 361 ISVAGFSRFLKVCGSELVRLELS-CSHFLNETCLEVISEMCPNLQALNLSSCDKLPPQAF 419
Query: 193 ACLHHLQNLRRL 204
+ L +L+RL
Sbjct: 420 NHIAKLCSLKRL 431
>gi|27734755 F-box and leucine-rich repeat protein 20 [Homo sapiens]
Length = 436
Score = 37.7 bits (86), Expect = 0.010
Identities = 30/116 (25%), Positives = 55/116 (47%), Gaps = 8/116 (6%)
Query: 136 INYEGLDNLLR-LKELQSLSLQRCSHVDDWCLSRLYPLADSLQELSLAGCPRISERGLAC 194
I EGL + R +LQSL CS++ D L+ L L+ L +A C ++++ G
Sbjct: 234 ITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTT 293
Query: 195 L-HHLQNLRRLDISDLPAVSNPGLTQILVE------EMLPNCEVVGVDWAEGLKSG 243
L + L ++D+ + +++ L Q+ + L +CE++ D L +G
Sbjct: 294 LARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIRHLGNG 349
Score = 34.3 bits (77), Expect = 0.11
Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Query: 150 LQSLSLQRCSHVDDWCLSRLYPLADSLQELSLAGCPRISERGLACLHHL-QNLRRLDISD 208
L+ LSL+ C V D L +++ L+L GC + ++ L LR LD++
Sbjct: 93 LRKLSLRGCLGVGDNALRTFAQNCRNIEVLNLNGCTKTTDATCTSLSKFCSKLRHLDLAS 152
Query: 209 LPAVSNPGLTQILVEEMLPNCEVVGVDWAE 238
+++N L + E P E + + W +
Sbjct: 153 CTSITNMSLKAL--SEGCPLLEQLNISWCD 180
Score = 33.9 bits (76), Expect = 0.14
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 149 ELQSLSLQRCSHVDDWCLSRLYPLADSLQELSLAGCPRISERGL------ACLHHLQNLR 202
EL+ + L+ C + D L +L LQ LSL+ C I++ G+ AC H L
Sbjct: 300 ELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIRHLGNGACAH--DQLE 357
Query: 203 RLDISDLPAVSNPGLTQI 220
+++ + P +++ L +
Sbjct: 358 VIELDNCPLITDASLEHL 375
Score = 31.6 bits (70), Expect = 0.71
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Query: 149 ELQSLSLQRCSHVDDWCLSRLYPLADSLQELSLAGCPRISERGLACLHHLQNLRRLDISD 208
EL +L+LQ C + D L + LQ L +GC I++ L L QN RL I +
Sbjct: 222 ELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALG--QNCPRLRILE 279
Query: 209 LPAVSNPGLTQILVEEMLPNC 229
+ S LT + + NC
Sbjct: 280 VARCSQ--LTDVGFTTLARNC 298
>gi|6912466 F-box and leucine-rich repeat protein 7 [Homo sapiens]
Length = 491
Score = 37.4 bits (85), Expect = 0.013
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 123 EVPVEAVDAGDCDI-NYEGLDNLL-RLKELQSLSLQRCSHVDDWCLSRLYPLADSLQELS 180
++ + +D DC + EGL + +L L L+RC + D L L S++ELS
Sbjct: 271 QISIRYLDMTDCFVLEDEGLHTIAAHCTQLTHLYLRRCVRLTDEGLRYLVIYCASIKELS 330
Query: 181 LAGCPRISERGLACLHHLQN-LRRLDISDLPAVSNPGLTQI 220
++ C +S+ GL + L++ LR L I+ V++ G+ +
Sbjct: 331 VSDCRFVSDFGLREIAKLESRLRYLSIAHCGRVTDVGIRYV 371
Score = 37.0 bits (84), Expect = 0.017
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 149 ELQSLSLQRCSHVDDWCLSRLYPLADSLQELSLAGCPRISERGLACLH-HLQNLRRLDIS 207
+L+ L+ + C + D + L L+ L + CP +S+ GL CL + NL+RL +
Sbjct: 377 KLRYLNARGCEGITDHGVEYLAKNCTKLKSLDIGKCPLVSDTGLECLALNCFNLKRLSLK 436
Query: 208 DLPAVSNPGL 217
+++ GL
Sbjct: 437 SCESITGQGL 446
Score = 33.5 bits (75), Expect = 0.19
Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 11/88 (12%)
Query: 148 KELQSLSLQRCSHVDDWCLSRLYPLADSLQELSLAGCPRISERGLACLHH-LQNLRRLDI 206
+ L+ L+ + C + CL L+ ++++GC R+++RGL + LRRL++
Sbjct: 168 RALKVLTRRLCQDTPNVCLM--------LETVTVSGCRRLTDRGLYTIAQCCPELRRLEV 219
Query: 207 SDLPAVSNPGLTQILVEEMLPNCEVVGV 234
S +SN + ++ + PN E + V
Sbjct: 220 SGCYNISNEAVFDVV--SLCPNLEHLDV 245
>gi|190194416 F-box and leucine-rich repeat protein 15 [Homo
sapiens]
Length = 300
Score = 37.0 bits (84), Expect = 0.017
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Query: 150 LQSLSLQRCSHVDDWCLSRLYPLADSLQELSLAGCPRISERGLACLHHLQNLRRLDISDL 209
LQ LSL C VD L L +L+EL L C ++ + + +L R + L
Sbjct: 142 LQRLSLAHCDWVDGLALRGLADRCPALEELDLTACRQLKDEAIV---YLAQRRGAGLRSL 198
Query: 210 PAVSNPGLTQILVEEMLPNC 229
N + V+E+ NC
Sbjct: 199 SLAVNANVGDAAVQELARNC 218
Score = 28.1 bits (61), Expect = 7.9
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 150 LQSLSLQRCSHVDDWCLSRLYPLADSLQELSLAGCPRISERGLACL-HHLQNLRRLDISD 208
L+SLSL ++V D + L L L L GC R+ G+ L + LR L +
Sbjct: 195 LRSLSLAVNANVGDAAVQELARNCPELHHLDLTGCLRVGSDGVRTLAEYCPVLRSLRVRH 254
Query: 209 LPAVSNPGLTQI 220
V+ L+++
Sbjct: 255 CHHVAESSLSRL 266
>gi|16306582 F-box and leucine-rich repeat protein 2 [Homo sapiens]
Length = 423
Score = 36.2 bits (82), Expect = 0.029
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 150 LQSLSLQRCSHVDDWCLSRLYPLADSLQELSLAGCPRISERGLACLHHL-QNLRRLDISD 208
L+ LSL+ C V D L +++ L+L GC +I++ L L+ LD++
Sbjct: 80 LRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTS 139
Query: 209 LPAVSNPGLTQILVEEMLPNCEVVGVDWAEGL-KSGPE 245
+++N L I E N E + + W + + K G E
Sbjct: 140 CVSITNSSLKGI--SEGCRNLEYLNLSWCDQITKDGIE 175
Score = 35.4 bits (80), Expect = 0.049
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 8/124 (6%)
Query: 120 NFCEVPVEAVDAGDCDINYEGLDNLLR-LKELQSLSLQRCSHVDDWCLSRLYPLADSLQE 178
N+C V I EG+ + R LQ+L L CS++ D L+ L LQ
Sbjct: 205 NYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQI 264
Query: 179 LSLAGCPRISERGLACL-HHLQNLRRLDISDLPAVSNPGLTQI------LVEEMLPNCEV 231
L A C +++ G L + L ++D+ + +++ L Q+ L L +CE+
Sbjct: 265 LEAARCSHLTDAGFTLLARNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCEL 324
Query: 232 VGVD 235
+ D
Sbjct: 325 ITDD 328
Score = 31.6 bits (70), Expect = 0.71
Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 31/112 (27%)
Query: 149 ELQSLSLQRCSHVDDWCLSRLYPLADSLQELSLAGCPRISERGL---------------- 192
EL+ + L+ C + D L +L LQ LSL+ C I++ G+
Sbjct: 287 ELEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELITDDGILHLSNSTCGHERLRVL 346
Query: 193 ----------ACLHHLQN---LRRLDISDLPAVSNPGLTQILVEEMLPNCEV 231
L HL+N L RL++ D V+ G+ ++ + LP+ +V
Sbjct: 347 ELDNCLLITDVALEHLENCRGLERLELYDCQQVTRAGIKRMRAQ--LPHVKV 396
>gi|188219559 protein phosphatase 1, regulatory subunit 15B [Homo
sapiens]
Length = 713
Score = 34.3 bits (77), Expect = 0.11
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 135 DINYEGLDNLLRLKELQSLSLQRCSHVDDWCLSRLYPLADSLQELSLAGCPRISERGLAC 194
+++Y+ D + Q+L+ + +D C + PL+ L S GCP +S GL
Sbjct: 235 EVSYQNSDGNSEVVGFQTLTPESSCLREDHCHPQ--PLSAELIPASWQGCPPLSTEGLPE 292
Query: 195 LHHLQNLRRLD 205
+HHL+ ++RL+
Sbjct: 293 IHHLR-MKRLE 302
>gi|161333854 F-box and leucine-rich repeat protein 13 isoform 2
[Homo sapiens]
Length = 690
Score = 33.5 bits (75), Expect = 0.19
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 150 LQSLSLQRCSHVDDWCLSRLYPLADSLQELSLAGCPRISERGLACLHHLQNLRRLDISDL 209
++ L+L C + D + +L +L LSL C ++ +G+ + ++ +L +D+S
Sbjct: 481 IRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFSLVSIDLSGT 540
Query: 210 PAVSNPGLTQILVEEMLPNCEV 231
+SN GL + + L V
Sbjct: 541 D-ISNEGLNVLSRHKKLKELSV 561
Score = 32.7 bits (73), Expect = 0.32
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 128 AVDAGDCDINYEGLDNLLRLKELQSLSLQRCSHVDDWCLSRLYPLADSLQELSLAGC 184
++D DI+ EGL+ L R K+L+ LS+ C + D + + DS E+ A C
Sbjct: 534 SIDLSGTDISNEGLNVLSRHKKLKELSVSECYRITDDGIQ----ITDSAMEMLSAKC 586
Score = 30.0 bits (66), Expect = 2.1
Identities = 37/152 (24%), Positives = 61/152 (40%), Gaps = 33/152 (21%)
Query: 97 AVKFRDKEWIRPDKYGHFSQEFWNFCEVPVEAVDAGDCDINYEGLDNLLRLKELQSLSLQ 156
A+ F + + PDKY + + W + V ++ C + + ++ + LQ L++
Sbjct: 197 AIDFSSVKNVIPDKYIVSTLQRWR---LNVLRLNFRGCLLRPKTFRSVSHCRNLQELNVS 253
Query: 157 RCS--------HVDDWC----------------LSRLYPLA-DSLQELSLAGCPRISERG 191
C H+ + C RL P +LQ LSLA C R +++G
Sbjct: 254 DCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLAYCRRFTDKG 313
Query: 192 LACLHHLQNLRRLDISDLPAVSNPGLTQILVE 223
L L+ +L DL G TQI V+
Sbjct: 314 LQYLNLGNGCHKLIYLDL-----SGCTQISVQ 340
>gi|254039600 F-box and leucine-rich repeat protein 17 [Homo
sapiens]
Length = 303
Score = 28.5 bits (62), Expect = 6.0
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 149 ELQSLSLQRCSHVDDWCLSRLYPLADSLQELSLAGCPRISERGLACLHHLQNLRRLDISD 208
+LQ + +Q V D + LQ + GC ++ +G+ L L+NL LD+
Sbjct: 93 KLQRIYMQENKLVTDQSVKAFAEHCPELQYVGFMGCS-VTSKGVIHLTKLRNLSSLDLRH 151
Query: 209 LPAVSNPGLTQIL 221
+ + N + +I+
Sbjct: 152 ITELDNETVMEIV 164
>gi|51873034 F-box and leucine-rich repeat protein 9 [Homo sapiens]
Length = 223
Score = 28.5 bits (62), Expect = 6.0
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 141 LDNLLRLKELQSLSLQRCSHVDDWCLSRLYPLADSLQELSLAGCPRISERGLA 193
L +L+ +L+ LSL + D L + SL+ L+L+ C R+S++G A
Sbjct: 93 LAKVLQFLQLRQLSLSLLPELTDNGLVAVARGCPSLEHLALSHCSRLSDKGWA 145
>gi|16306591 F-box and leucine-rich repeat protein 9 [Homo sapiens]
Length = 223
Score = 28.5 bits (62), Expect = 6.0
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 141 LDNLLRLKELQSLSLQRCSHVDDWCLSRLYPLADSLQELSLAGCPRISERGLA 193
L +L+ +L+ LSL + D L + SL+ L+L+ C R+S++G A
Sbjct: 93 LAKVLQFLQLRQLSLSLLPELTDNGLVAVARGCPSLEHLALSHCSRLSDKGWA 145
>gi|41872631 fatty acid synthase [Homo sapiens]
Length = 2511
Score = 28.1 bits (61), Expect = 7.9
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Query: 140 GLDNLLRLKELQSLSLQ-----RCSHVDDWCLSRLYPLADSLQELSLAGCPRISERGLAC 194
GLD+L+ ++ Q+L + V L +L L+ E S CP E GLA
Sbjct: 2153 GLDSLMSVEVRQTLERELNLVLSVREVRQLTLRKLQELSSKADEASELACPTPKEDGLAQ 2212
Query: 195 LHHLQNLRRL 204
NLR L
Sbjct: 2213 QQTQLNLRSL 2222
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.138 0.438
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,799,679
Number of Sequences: 37866
Number of extensions: 491425
Number of successful extensions: 1191
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1140
Number of HSP's gapped (non-prelim): 41
length of query: 257
length of database: 18,247,518
effective HSP length: 100
effective length of query: 157
effective length of database: 14,460,918
effective search space: 2270364126
effective search space used: 2270364126
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.